mRNA_L-elsbetiae_contig7486.16376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.760e-45 Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 2 Query: 110 TPVSADDVDDTNFTPRSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDG 445 T VSADD+ FTPRS+DGVGNNEANP WGA G+ ++R+VA ADY D F PPGDL RPTAREVMTDVFL+SPPA+ST+SALF+AWGQLLTYDLSLT DNSSEPFD+ CNDG Sbjct: 24 TTVSADDLPTDEFTPRSYDGVGNNEANPTWGAVGSIELRSVAQADYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWGQLLTYDLSLTVDNSSEPFDIACNDG 136
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 170 bits (430), Expect = 3.280e-44 Identity = 86/112 (76.79%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 116 VSADDVDDTNFTPRSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGV 448 V ADD+D FTPRSFDGVGNNEA P WGA G Q+R+VAGA Y DA F PPGDL RPTAREVMTDVFL SPPALST SALFI WGQLL +DLSLTSDNSSEP D+ CNDG Sbjct: 102 VLADDLDLEEFTPRSFDGVGNNEAFPSWGAVGATQLRSVAGAYYADADFTPPGDLTRPTAREVMTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIECNDGT 213
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 124 bits (310), Expect = 6.250e-28 Identity = 78/182 (42.86%), Postives = 90/182 (49.45%), Query Frame = 2 Query: 110 TPVSADDVDDTNFTPRSFDGVGNN-------------------------------------EANPEWGAAGTAQIRAVAGA--------------------------------DYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDG 445 T VSA D+ FTPRS+DGVGNN EANP WGA G ++ + G+ DY D F PPGDL RPTAREVMTDVFL+SPPA+ST+SALF+AW QLLTYDLSL D SSEPFD+ C+DG Sbjct: 5 TTVSAGDLATDEFTPRSYDGVGNNXFPPPPTQGMXXXXXXXXXXXXXXXXXXXXXXXXXXXEANPTWGAVGAIEVCCLKGSRQQRHRAIERTTTTITMPAGCPVYPPSVTVPPDYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWAQLLTYDLSLAVDISSEPFDIACDDG 186
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 115 bits (289), Expect = 7.530e-25 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 155 RSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELEEREYVC 478 R+++G GNN PEWG+ G Q+R++ A Y D PPGD RPTAREV+++VFL++P ST +ALF+ WG L+ YDL LT DN+SEP D+ CND E R+ C Sbjct: 45 RTYNGTGNNLDQPEWGSVGQRQLRSMTEASYGDGVSEPPGDDRPTAREVLSEVFLANPSTTSTANALFVGWGLLVGYDLFLTQDNASEPLDIACNDA----EIRDVWC 148
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE) HSP 1 Score: 106 bits (265), Expect = 8.670e-22 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 176 NNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELEEREYVC 478 NN PEWG+ G Q+R++ A Y D PPGD RPTAREV+++VFL++P ST +ALF+ WG L+ YDL LT DN+SEP D+ CND E R+ C Sbjct: 22 NNLDQPEWGSVGQRQLRSITEASYADGDSEPPGDDRPTAREVLSEVFLANPSTSSTANALFVGWGLLVGYDLFLTLDNASEPLDIACNDA----EIRDVWC 118
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.250e-14 Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 302 MTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGV 448 MTDVFL SPPALST SALFI WGQLL +DLSLTSDNSSEP D+ CNDG Sbjct: 1 MTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIDCNDGT 49
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JA13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA13_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 9.770e-14 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 281 RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCND 442 +P +EVMTD+FL+S ALS KS+LFIAWGQLLTYDL+LT N +E DVPCND Sbjct: 13 QPLGKEVMTDIFLTSTAALSAKSSLFIAWGQLLTYDLALTVANETESLDVPCND 66
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.780e-12 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 2 Query: 272 GDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460 G L+ RE+MTDVFLSSPP++S +A+ IAWGQLL DLS T DNSSEPFD+ C+DG ++ Sbjct: 7 GALQGQPRELMTDVFLSSPPSVSDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVD 69
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.780e-12 Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 2 Query: 272 GDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460 G LR RE+MTDVFLSSPP++S +A+ IAWGQLL DLS T DNSSEPF++ C+DG ++ Sbjct: 7 GALRGQPRELMTDVFLSSPPSVSDMNAVSIAWGQLLLLDLSYTVDNSSEPFEIACDDGGGSVD 69
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 5.680e-11 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 299 VMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460 +MTDVFLSSPP +S + +FIAWGQLL DLS T DNSSEPFD+ C+DG ++ Sbjct: 1 MMTDVFLSSPPKVSEMNTVFIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVD 54 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7486.16376.1 >prot_L-elsbetiae_contig7486.16376.1 ID=prot_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp MGVAPAAAAAAAAAVAVAVAACSIGLVTPVSADDVDDTNFTPRSFDGVGNback to top mRNA from alignment at L-elsbetiae_contig7486:3251..6080+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7486.16376.1 ID=mRNA_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2830bp|location=Sequence derived from alignment at L-elsbetiae_contig7486:3251..6080+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7486:3251..6080+ >mRNA_L-elsbetiae_contig7486.16376.1 ID=mRNA_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=960bp|location=Sequence derived from alignment at L-elsbetiae_contig7486:3251..6080+ (Laminarionema elsbetiae ELsaHSoW15)back to top |