mRNA_L-elsbetiae_contig7486.16376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7486.16376.1
Unique NamemRNA_L-elsbetiae_contig7486.16376.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.760e-45
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 2
Query:  110 TPVSADDVDDTNFTPRSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDG 445
            T VSADD+    FTPRS+DGVGNNEANP WGA G+ ++R+VA ADY D  F PPGDL RPTAREVMTDVFL+SPPA+ST+SALF+AWGQLLTYDLSLT DNSSEPFD+ CNDG
Sbjct:   24 TTVSADDLPTDEFTPRSYDGVGNNEANPTWGAVGSIELRSVAQADYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWGQLLTYDLSLTVDNSSEPFDIACNDG 136          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.280e-44
Identity = 86/112 (76.79%), Postives = 91/112 (81.25%), Query Frame = 2
Query:  116 VSADDVDDTNFTPRSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGV 448
            V ADD+D   FTPRSFDGVGNNEA P WGA G  Q+R+VAGA Y DA F PPGDL RPTAREVMTDVFL SPPALST SALFI WGQLL +DLSLTSDNSSEP D+ CNDG 
Sbjct:  102 VLADDLDLEEFTPRSFDGVGNNEAFPSWGAVGATQLRSVAGAYYADADFTPPGDLTRPTAREVMTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIECNDGT 213          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 6.250e-28
Identity = 78/182 (42.86%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  110 TPVSADDVDDTNFTPRSFDGVGNN-------------------------------------EANPEWGAAGTAQIRAVAGA--------------------------------DYEDAAFNPPGDL-RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDG 445
            T VSA D+    FTPRS+DGVGNN                                     EANP WGA G  ++  + G+                                DY D  F PPGDL RPTAREVMTDVFL+SPPA+ST+SALF+AW QLLTYDLSL  D SSEPFD+ C+DG
Sbjct:    5 TTVSAGDLATDEFTPRSYDGVGNNXFPPPPTQGMXXXXXXXXXXXXXXXXXXXXXXXXXXXEANPTWGAVGAIEVCCLKGSRQQRHRAIERTTTTITMPAGCPVYPPSVTVPPDYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWAQLLTYDLSLAVDISSEPFDIACDDG 186          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 7.530e-25
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 2
Query:  155 RSFDGVGNNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELEEREYVC 478
            R+++G GNN   PEWG+ G  Q+R++  A Y D    PPGD RPTAREV+++VFL++P   ST +ALF+ WG L+ YDL LT DN+SEP D+ CND     E R+  C
Sbjct:   45 RTYNGTGNNLDQPEWGSVGQRQLRSMTEASYGDGVSEPPGDDRPTAREVLSEVFLANPSTTSTANALFVGWGLLVGYDLFLTQDNASEPLDIACNDA----EIRDVWC 148          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 8.670e-22
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 2
Query:  176 NNEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELEEREYVC 478
            NN   PEWG+ G  Q+R++  A Y D    PPGD RPTAREV+++VFL++P   ST +ALF+ WG L+ YDL LT DN+SEP D+ CND     E R+  C
Sbjct:   22 NNLDQPEWGSVGQRQLRSITEASYADGDSEPPGDDRPTAREVLSEVFLANPSTSSTANALFVGWGLLVGYDLFLTLDNASEPLDIACNDA----EIRDVWC 118          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.250e-14
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 2
Query:  302 MTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGV 448
            MTDVFL SPPALST SALFI WGQLL +DLSLTSDNSSEP D+ CNDG 
Sbjct:    1 MTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIDCNDGT 49          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JA13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA13_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.770e-14
Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 2
Query:  281 RPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCND 442
            +P  +EVMTD+FL+S  ALS KS+LFIAWGQLLTYDL+LT  N +E  DVPCND
Sbjct:   13 QPLGKEVMTDIFLTSTAALSAKSSLFIAWGQLLTYDLALTVANETESLDVPCND 66          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.780e-12
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  272 GDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460
            G L+   RE+MTDVFLSSPP++S  +A+ IAWGQLL  DLS T DNSSEPFD+ C+DG   ++
Sbjct:    7 GALQGQPRELMTDVFLSSPPSVSDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVD 69          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.780e-12
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  272 GDLRPTAREVMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460
            G LR   RE+MTDVFLSSPP++S  +A+ IAWGQLL  DLS T DNSSEPF++ C+DG   ++
Sbjct:    7 GALRGQPRELMTDVFLSSPPSVSDMNAVSIAWGQLLLLDLSYTVDNSSEPFEIACDDGGGSVD 69          
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 5.680e-11
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 2
Query:  299 VMTDVFLSSPPALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELE 460
            +MTDVFLSSPP +S  + +FIAWGQLL  DLS T DNSSEPFD+ C+DG   ++
Sbjct:    1 MMTDVFLSSPPKVSEMNTVFIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVD 54          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7486.16376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LFE6_ECTSI1.760e-4576.11Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7FX03_ECTSI3.280e-4476.79Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K036_9PHAE6.250e-2842.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB73_ECTSI7.530e-2550.93Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K9L2_9PHAE8.670e-2251.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBL8_9PHAE1.250e-1481.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA13_9PHAE9.770e-1468.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7J1_ECTSI1.780e-1260.32Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G7J2_ECTSI1.780e-1260.32Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JQ31_9PHAE5.680e-1162.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7486contigL-elsbetiae_contig7486:3251..6080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score177.6
Seed ortholog evalue4.8e-42
Seed eggNOG ortholog2880.D8LFE6
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.peroxidase activity
EggNOG OGsKOG2408@1,KOG2408@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1011
Cds size480
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7486.16376.1prot_L-elsbetiae_contig7486.16376.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7486 3279..5577 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.174439-UTR-L-elsbetiae_contig7486:3250..32781622816832.174439-UTR-L-elsbetiae_contig7486:3250..3278Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7486 3251..3278 +
1691683847.05325-UTR-L-elsbetiae_contig7486:3250..32781691683847.05325-UTR-L-elsbetiae_contig7486:3250..3278Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7486 3251..3278 +
1622816832.2257807-UTR-L-elsbetiae_contig7486:5577..60801622816832.2257807-UTR-L-elsbetiae_contig7486:5577..6080Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7486 5578..6080 +
1691683847.1203468-UTR-L-elsbetiae_contig7486:5577..60801691683847.1203468-UTR-L-elsbetiae_contig7486:5577..6080Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7486 5578..6080 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.1847222-CDS-L-elsbetiae_contig7486:3278..34701622816832.1847222-CDS-L-elsbetiae_contig7486:3278..3470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 3279..3470 +
1691683847.0662646-CDS-L-elsbetiae_contig7486:3278..34701691683847.0662646-CDS-L-elsbetiae_contig7486:3278..3470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 3279..3470 +
1622816832.194619-CDS-L-elsbetiae_contig7486:3854..39281622816832.194619-CDS-L-elsbetiae_contig7486:3854..3928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 3855..3928 +
1691683847.0774322-CDS-L-elsbetiae_contig7486:3854..39281691683847.0774322-CDS-L-elsbetiae_contig7486:3854..3928Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 3855..3928 +
1622816832.204402-CDS-L-elsbetiae_contig7486:4808..49571622816832.204402-CDS-L-elsbetiae_contig7486:4808..4957Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 4809..4957 +
1691683847.0942473-CDS-L-elsbetiae_contig7486:4808..49571691683847.0942473-CDS-L-elsbetiae_contig7486:4808..4957Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 4809..4957 +
1622816832.2155347-CDS-L-elsbetiae_contig7486:5512..55771622816832.2155347-CDS-L-elsbetiae_contig7486:5512..5577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 5513..5577 +
1691683847.10562-CDS-L-elsbetiae_contig7486:5512..55771691683847.10562-CDS-L-elsbetiae_contig7486:5512..5577Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7486 5513..5577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7486.16376.1

>prot_L-elsbetiae_contig7486.16376.1 ID=prot_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp
MGVAPAAAAAAAAAVAVAVAACSIGLVTPVSADDVDDTNFTPRSFDGVGN
NEANPEWGAAGTAQIRAVAGADYEDAAFNPPGDLRPTAREVMTDVFLSSP
PALSTKSALFIAWGQLLTYDLSLTSDNSSEPFDVPCNDGVSELEEREYVC
TRCIRVGRK*
back to top

mRNA from alignment at L-elsbetiae_contig7486:3251..6080+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7486.16376.1 ID=mRNA_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2830bp|location=Sequence derived from alignment at L-elsbetiae_contig7486:3251..6080+ (Laminarionema elsbetiae ELsaHSoW15)
GCGTCTCCTCTTCGCCTTCAGCCGCCGCATGGGTGTTGCTCCTGCTGCTG CTGCTGCTGCGGCTGCGGCGGTGGCGGTGGCGGTTGCGGCTTGCTCGATC GGGCTGGTGACGCCCGTGTCGGCAGACGACGTGGATGACACGAACTTCAC CCCTCGAAGCTTCGACGGGGTCGGGAACAACGAGGCCAATCCGGAGTGGG GCGCCGCCGGCACCGCGCAGGTGTGCGTGCGTGCGTGCGTGTGTGTGTGT CTGTGTGTGTCTGTGTGTGTTGCGCATGAGCTCGTCTGTTGCTCTTTGTG AGGGCGCGCGCGAAATATATTGTTCTACATGTGTACCCATACATAGCACG GTTGGCACGGCGTGTTCTGAGCGTAACCACAGAAACCCCCCCGCCTCGCT GGGCAAAGGCTGGGCACTGCTGCTGTCGAGCGTACGGGTTCTTGAGAAAT AACGGTACGCTCGGAATGTTCAGGGATATGCCTACATCTGGCGGTTTTCG ACAGCTGGGGGGAGACGTGTGGGCGGGCGGTACGTACCGCTGCATACATG CACGTGCTTTGAGACTGCTTTCTCATCCGATACGCCCCATCTTTCTTCGC ACAGATTCGGGCGGTGGCCGGCGCTGATTACGAGGATGCGGCGTTCAACC CTCCCGGAGACCTCCGGCCCACCGCCAGGTAAAGGTCTACGTAGATGTTT ACGGCGCTTTTTTGCCTTTTTTCCCTCCCATTATTGGCATATGTATTTGT CGTCTGCCCCACTGGCCCTCCCATACTCCATCCACTACGACTAGCTAGGC GACCCAACCGGGGTCGCACAGGAGGAGTCGAATGGCGATTGTGTCAGATA AAGAAGTTTGTGTGTGTAGCAGCGTGTGGCACACTTGTTACCCGAGTGCA AAACTGGTGGTCGCCTCTCGCGTCGATCGGGTGCGGGTGATTGAGTTTCC TTGATTCAATCACTTGCCCGCGTGGGGGCGGGGCGGGCGCGTCACATGAC TTTGAATAAATACCAGCATTTTTCTCCTGTCTCAACTTGTGCTGGTTTCC GAAAGAAGACGGATGAGCCTTGTAATATTTGCCATTTAAAACATATTTCT GAGAGAAAATGAGATAGAGAGATAGCGGAGGAGGGAAGAGAGGTCACAAC GCACCCGGAGAAAGGCCGCCCCTATTTTATTTTATTTTCTTCTTCCATGT TCATGTCTAGTGCTCGATGGGCCCCTTGTCACGAGGACATCTTGCCAGAG TACCGAACCGTGGTTGGTCACACAGAAGGGCTCCTTTCCCCAAGGCCCCC ACTCCCCCCGTCTGCGGTGCTTGCCTAAGGTTTTTTGTCGCGAGAAGGGT TCAGCCGTCCCTTCCCCCTCCCTCGTCGACGGCGAGGTCGAACTTTTACT TTTCAAGCCCCATGGACGGGACACATGGATGATGGCGTGACGTACTTGCG GTCCGCCACCACATATTACCCTTGTTGCGAGTATTTTTATCCGCCACCAC TTTCGAAGCTCCGTATTTGCTTTCCTCGAACCGCGCTGACCCTGTGTTGG GCCCCCAGGGAGGTGATGACGGACGTGTTTCTGTCCTCGCCACCGGCGCT GTCGACCAAGAGCGCCCTCTTCATCGCCTGGGGCCAGCTGCTGACCTACG ATCTTTCTCTCACCAGTGACAATTCTTCCGAGCCCTTCGACGTCCCGTGT AACGACGGTGAGAGAGTGGCGTCTGCACGCGCGCGAGTCTCGTCTATCAA GGGGTCACCAGGATTGCAGGGCTGGAAGCACACCCCCAAACTTCCATACG GCCGGATTCGGGGAGGGGGGGGGGGTATACTAAAACCTATATAAAAGAAA GGGGGCCCTCAGGTGGTATTATTAAGGGGGCGCTTTTAGCCGGGGGTATA TGCCCCCGAACGGTCCCCCCTATACTTAAGTCCTATAAGTTTCCCAAACC TCGGTAGGGCCAAAAAAGAGGGAGGAAGGGGGGGGACGGGGGGGGGGTAT GCTTCCAGGATTGTCACCTGGGTGACCCCTTGCGTCTATCTGCGGGGGTG CCAGTGCTTGACTATCCTTGGCGGGGGAGGGGGGGGCAGAGAAGTGGGAG CAACAGGTTTTGTTTTTTGCGCGCGGGAGGATCGCCGTGGGCATCCATGT TGTGGATGCGCAGCACTAACCCCGACCCGGCCCGGAAACTCGTCGGCGCG TCCGGGTGGAACGGCGTCCGTGGCGCGTGTGCCTCGTGTACTGCTCCATC TGTCTGTACCAGGTGTATCAGAGTTGGAAGAACGTGAATATGTATGCACC AGGTGTATCAGAGTTGGAAGAAAGTGACTGCTGTCGAAGGATAAAAAGCA AGACGCCATCCCCGCCTCTCGCGCGGCGGCGGCGGCGGCGCTCGAACGAG GCGAGTTGCGAGACCACAGGTCTCGTTGCGGCTGGCCTCAACCGACCACG AGACGCAGCGTCATGCGGCCCGGCACCTCCAGCCCCAATGGCTTCTGTCT CTCTAAGGCCAACGGGGATGGGCGGAGCACGTCGCACCCACCCAGCGCTG CTGCCAGCTCTCGGGGGGTTTTCCCCGCCGCCAAGAAGCTCAGACAAAAA ACAAGAGCACTGCCGTAGGTGACATAAGATAAGACACCCCCTGGACTGAG ATTGAAAGCTTGGTTACTCCGCAACGAATACGATTCTAACCGCAAACGCC ACGTTTTCGGACAGCTCTCGACGAGATCTTTCCAACGCCGCCCTTCTCGG GACTGACGCTCTGCTTGCTGTGGAGTACTTGAGCTTTGAAAATCGGTCCA AGGGGTGTCTTATCTTATGTCACCTACGGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7486:3251..6080+

>mRNA_L-elsbetiae_contig7486.16376.1 ID=mRNA_L-elsbetiae_contig7486.16376.1|Name=mRNA_L-elsbetiae_contig7486.16376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=960bp|location=Sequence derived from alignment at L-elsbetiae_contig7486:3251..6080+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTGTTGCTCCTGCTGCTGCTGCTGCTGCGGCTGCGGCGGTGGCGGT
GGCGGTTGCGGCTTGCTCGATCGGGCTGGTGACGCCCGTGTCGGCAGACG
ACGTGGATGACACGAACTTCACCCCTCGAAGCTTCGACGGGGTCGGGAAC
AACGAGGCCAATCCGGAGTGGGGCGCCGCCGGCACCGCGCAGATGGGTGT
TGCTCCTGCTGCTGCTGCTGCTGCGGCTGCGGCGGTGGCGGTGGCGGTTG
CGGCTTGCTCGATCGGGCTGGTGACGCCCGTGTCGGCAGACGACGTGGAT
GACACGAACTTCACCCCTCGAAGCTTCGACGGGGTCGGGAACAACGAGGC
CAATCCGGAGTGGGGCGCCGCCGGCACCGCGCAGATTCGGGCGGTGGCCG
GCGCTGATTACGAGGATGCGGCGTTCAACCCTCCCGGAGACCTCCGGCCC
ACCGCCAGATTCGGGCGGTGGCCGGCGCTGATTACGAGGATGCGGCGTTC
AACCCTCCCGGAGACCTCCGGCCCACCGCCAGGGAGGTGATGACGGACGT
GTTTCTGTCCTCGCCACCGGCGCTGTCGACCAAGAGCGCCCTCTTCATCG
CCTGGGGCCAGCTGCTGACCTACGATCTTTCTCTCACCAGTGACAATTCT
TCCGAGCCCTTCGACGTCCCGTGTAACGACGGGAGGTGATGACGGACGTG
TTTCTGTCCTCGCCACCGGCGCTGTCGACCAAGAGCGCCCTCTTCATCGC
CTGGGGCCAGCTGCTGACCTACGATCTTTCTCTCACCAGTGACAATTCTT
CCGAGCCCTTCGACGTCCCGTGTAACGACGGTGTATCAGAGTTGGAAGAA
CGTGAATATGTATGCACCAGGTGTATCAGAGTTGGAAGAAAGTGAGTGTA
TCAGAGTTGGAAGAACGTGAATATGTATGCACCAGGTGTATCAGAGTTGG
AAGAAAGTGA
back to top