mRNA_L-elsbetiae_contig7484.16375.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7484.16375.1
Unique NamemRNA_L-elsbetiae_contig7484.16375.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.150e-18
Identity = 112/240 (46.67%), Postives = 142/240 (59.17%), Query Frame = 2
Query:   11 MAKRDRREAPRGEEEETFDSLVDLSS-KQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYR--TALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAA 721
            MA    R A RGEEE  FD   +  + KQWA L++    LE AA +G+  L  +LV AGAEIG A+  AV GGH ++   L+ESG   +A D +  +PL                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D++    G  + S + + A  G+++ +R +IEHGAD+   D  NY    ALH A   ++VEA+ VL+ AGAN  +    G T LH AA
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQP--FLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRY-GDREISALDIGAGEGHVDFIRTLIEHGADV---DATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAA 234          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.090e-17
Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = 2
Query:    5 NPMAKRDRREAPRGEEEETFDSLVD-LSSKQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVAD 586
            N +A    R A +G E ETFD   + L++  WAE+L+ PL  E AAA+GN AL  +L+ AGA++G+AL  AV  GH E+V +L+E G  V+ +DT   +PL +A               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DV++ C GL K +V+ +AAE G+++ILRA+++HGAD+   D
Sbjct:   15 NALANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPL--ECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRC-GLLKRTVLSLAAEKGHVDILRALVKHGADVTAVD 206          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 7.440e-17
Identity = 100/169 (59.17%), Postives = 118/169 (69.82%), Query Frame = 2
Query:   80 LSSKQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVAD 586
            L+S+Q AELL+    LE AAAKGN+ LA RLV AGAEIG+AL  AVDGGH+E+V+DL+ES   +AA D D  +PL                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++  S  FK    H AA  G++EILRA+IEHGAD++  D
Sbjct:    9 LTSQQLAELLR--ALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLR-STQFKCPATHAAALEGHVEILRAIIEHGADVDAVD 174          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.700e-10
Identity = 104/229 (45.41%), Postives = 135/229 (58.95%), Query Frame = 2
Query:   29 REAPRGEEEETFDSLVDLSSK-QWAELLKDPLALERAAAKGNRALALRLVGAGAEIGN-ALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPL 709
            +E  +GEEE   D ++D     + +E L  PL  E A A+G+  LA +LV AGA+IG  AL EAV  GH  +   L+E+G  V   + D  +P                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++  +  F  S +  AA    +EILR +I+HG ++ +A    + TALH AA  +R  AI VLV AGA+I+A+   G  PL
Sbjct:   16 KETLKGEEERVLDLMLDTRCPHEMSEWLAAPL--ESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNE-FDMSFLDFAASSQDVEILRMLIDHGMEVNLAAA--FGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPL 239          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.340e-10
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  500 SVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQG--NGGR-TPLHYAA 721
            S + +AA  G++E+++A+I HG D++  D  N  TALH AAT D V AI  L+EAGANI+AQG  +G R TPLH A+
Sbjct:  152 SALGLAARGGHVEVMQALIRHGVDVDAPDS-NGLTALHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMAS 227          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: UPI00140F95BA (protein phosphatase 1 regulatory subunit 16A isoform X2 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=UPI00140F95BA)

HSP 1 Score: 67.8 bits (164), Expect = 2.030e-9
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 2
Query:  200 ALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAA--EWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAA 721
            AL ++     +E+V  L+E+G  V ARD++ W+PLH AA  G + +VELL+A+                                   + ++   G+ + S+    A  E   LE  +++++ GADL+   +    T LH AA     EA  +L+E GA++ A+   G  PLH AA
Sbjct:  107 ALHQSCIDDFREMVQQLLEAGAKVNARDSECWTPLHAAATCGHLHLVELLIARGADLLAVNTDGNMPYDLCEDEQTLDFL--------ETAMANRGITQDSIEAARALPERHMLEDFQSLLQSGADLDAPGDHG-ATLLHIAAANGFSEAAALLLEHGASLSAKDRDGWEPLHAAA 273          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.820e-8
Identity = 96/215 (44.65%), Postives = 119/215 (55.35%), Query Frame = 2
Query:  119 LALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHC----------AATRDRVEAIHVLVEAGANIEAQG----NGGRTPLHYAA 721
            +A   AA  GN  L  +L GAGA  G+AL  A+  G   L  DL+  G P  A+ ++  +                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D S+ C      S + +AA  G++E+++A+I HGAD+   D  N  TALH           AA  D+V AI  L+EAGANI  QG    +   TPLH A+
Sbjct:    1 MAANSAAGAGNLDLVTKLQGAGAG-GSALHLALRAGQDALARDLLRLGAPTKAKSSNGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPSLRCGKDEAFSTLGLAARGGHVEVMQALIRHGADVNAPDS-NGCTALHTXXXXXXXXXSAAIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMAS 213          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5KSG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG6_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.670e-8
Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 2
Query:  296 SPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNG 694
            +PLHLAA LGC +M+ L+L +            XXXXXXXXXXXXXXXXXXX    D+S+  SG    S +  AA  G ++++RA++ HG D+   D     TALH  A  ++  AI  LVEAGA++ A+G G
Sbjct:    4 TPLHLAAGLGCDDMMPLILQQGAVVDALDNQRRXXXXXXXXXXXXXXXXXXXAAGADLSLR-SGDNNESALETAAINGDVDVVRAMVRHGVDVNARDSQGL-TALHAVAESNQAGAIDALVEAGAHVNARGRG 134          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A0G2HMH3_9PEZI (Putative ankyrin repeat protein n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2HMH3_9PEZI)

HSP 1 Score: 60.5 bits (145), Expect = 1.540e-7
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  497 TSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYR--TALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAASH 727
            T+ +H AA +GYL+ +R ++EHGAD+  A  PN+   T +H AA++ RVEAI +L ++GA  + +   G+TP      H
Sbjct:  123 TAALHTAAGFGYLDTMRLLMEHGADVNEAI-PNWLDWTPMHFAASKGRVEAIKLLEQSGARSDLKDKDGKTPAQLLEEH 200          
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A163R4V5_9BACI (Uncharacterized protein n=1 Tax=Fictibacillus phosphorivorans TaxID=1221500 RepID=A0A163R4V5_9BACI)

HSP 1 Score: 58.9 bits (141), Expect = 3.430e-7
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  500 SVVHMAAEWGYLEILRAVIEHGADLEVADEPNY-RTALHCAAT--RDRVEAIHVLVEAGANIEAQGNGGRTPLHYAASH 727
            S +H+AA +G+++I+R ++E GAD+ V    N   T LH AA   ++R E I +L+  GA+I  Q +GG T LH AA H
Sbjct:   44 SPLHLAAHFGHIDIVRLLLEKGADVHVKSGNNMANTPLHAAAANMKNRQEMIGLLLANGADINEQQSGGWTILHQAAQH 122          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FKL4_ECTSI5.150e-1846.67Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D8LL12_ECTSI2.090e-1751.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXK5_9PHAE7.440e-1759.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI2.700e-1045.41Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JN15_9PHAE5.340e-1051.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00140F95BA2.030e-928.98protein phosphatase 1 regulatory subunit 16A isofo... [more]
D7G744_ECTSI1.820e-844.65Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KSG6_9PHAE4.670e-845.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G2HMH3_9PEZI1.540e-740.51Putative ankyrin repeat protein n=1 Tax=Diaporthe ... [more]
A0A163R4V5_9BACI3.430e-743.04Uncharacterized protein n=1 Tax=Fictibacillus phos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7484contigL-elsbetiae_contig7484:6950..7679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.0
Seed ortholog evalue3.9e-16
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size731
Cds size720
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.1320918-UTR-L-elsbetiae_contig7484:6949..69591622816832.1320918-UTR-L-elsbetiae_contig7484:6949..6959Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7484 6950..6959 +
1691683847.030851-UTR-L-elsbetiae_contig7484:6949..69591691683847.030851-UTR-L-elsbetiae_contig7484:6949..6959Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7484 6950..6959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.1430206-CDS-L-elsbetiae_contig7484:6959..76791622816832.1430206-CDS-L-elsbetiae_contig7484:6959..7679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7484 6960..7679 +
1691683847.0419734-CDS-L-elsbetiae_contig7484:6959..76791691683847.0419734-CDS-L-elsbetiae_contig7484:6959..7679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7484 6960..7679 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7484.16375.1prot_L-elsbetiae_contig7484.16375.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7484 6960..7679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7484.16375.1

>prot_L-elsbetiae_contig7484.16375.1 ID=prot_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
MAKRDRREAPRGEEEETFDSLVDLSSKQWAELLKDPLALERAAAKGNRAL
ALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHL
AARLGCVEMVELLLAKGADKDSLDQHNRTPLYLATEGDHVAAALALLAVG
ADVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTAL
HCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAASHL
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mRNA from alignment at L-elsbetiae_contig7484:6950..7679+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7484.16375.1 ID=mRNA_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=730bp|location=Sequence derived from alignment at L-elsbetiae_contig7484:6950..7679+ (Laminarionema elsbetiae ELsaHSoW15)
CGCAAACCCCATGGCAAAAAGGGATAGACGAGAAGCACCTCGAGGAGAAG AAGAGGAAACGTTCGACTCCCTCGTTGACTTGTCATCAAAGCAATGGGCG GAATTGCTGAAAGATCCACTCGCACTCGAGCGTGCCGCGGCCAAGGGCAA CAGAGCCCTCGCACTGAGGCTGGTCGGGGCAGGGGCAGAAATCGGGAACG CGCTGTTTGAGGCCGTTGATGGCGGCCATAAAGAACTCGTTAACGACCTT GTGGAGAGTGGAGTACCCGTCGCTGCCAGGGACACGGATGTCTGGAGTCC TCTCCATCTTGCCGCTCGGTTGGGGTGTGTGGAGATGGTGGAGCTGCTGT TGGCAAAGGGGGCTGACAAAGATTCGTTGGACCAGCACAATCGTACGCCG CTCTATCTAGCCACCGAAGGTGATCACGTGGCTGCTGCACTAGCTCTCCT GGCTGTCGGTGCGGACGTCAGTATTATGTGCTCCGGGCTATTCAAGACGT CGGTGGTGCACATGGCGGCTGAATGGGGGTATCTGGAGATCTTAAGGGCG GTGATCGAACATGGGGCGGACCTCGAGGTCGCTGACGAACCGAACTATAG AACGGCACTTCATTGTGCGGCCACCAGAGATAGGGTCGAGGCAATCCATG TGCTCGTGGAGGCTGGGGCCAACATCGAAGCCCAGGGTAATGGAGGCCGC ACACCTCTTCACTATGCTGCCAGCCACCTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7484:6950..7679+

>mRNA_L-elsbetiae_contig7484.16375.1 ID=mRNA_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig7484:6950..7679+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAAAAAGGGATAGACGAGAAGCACCTCGAGGAGAAGAAGAGGAAAC
GTTCGACTCCCTCGTTGACTTGTCATCAAAGCAATGGGCGGAATTGCTGA
AAGATCCACTCGCACTCGAGCGTGCCGCGGCCAAGGGCAACAGAGCCCTC
GCACTGAGGCTGGTCGGGGCAGGGGCAGAAATCGGGAACGCGCTGTTTGA
GGCCGTTGATGGCGGCCATAAAGAACTCGTTAACGACCTTGTGGAGAGTG
GAGTACCCGTCGCTGCCAGGGACACGGATGTCTGGAGTCCTCTCCATCTT
GCCGCTCGGTTGGGGTGTGTGGAGATGGTGGAGCTGCTGTTGGCAAAGGG
GGCTGACAAAGATTCGTTGGACCAGCACAATCGTACGCCGCTCTATCTAG
CCACCGAAGGTGATCACGTGGCTGCTGCACTAGCTCTCCTGGCTGTCGGT
GCGGACGTCAGTATTATGTGCTCCGGGCTATTCAAGACGTCGGTGGTGCA
CATGGCGGCTGAATGGGGGTATCTGGAGATCTTAAGGGCGGTGATCGAAC
ATGGGGCGGACCTCGAGGTCGCTGACGAACCGAACTATAGAACGGCACTT
CATTGTGCGGCCACCAGAGATAGGGTCGAGGCAATCCATGTGCTCGTGGA
GGCTGGGGCCAACATCGAAGCCCAGGGTAATGGAGGCCGCACACCTCTTC
ACTATGCTGCCAGCCACCTCATGGCAAAAAGGGATAGACGAGAAGCACCT
CGAGGAGAAGAAGAGGAAACGTTCGACTCCCTCGTTGACTTGTCATCAAA
GCAATGGGCGGAATTGCTGAAAGATCCACTCGCACTCGAGCGTGCCGCGG
CCAAGGGCAACAGAGCCCTCGCACTGAGGCTGGTCGGGGCAGGGGCAGAA
ATCGGGAACGCGCTGTTTGAGGCCGTTGATGGCGGCCATAAAGAACTCGT
TAACGACCTTGTGGAGAGTGGAGTACCCGTCGCTGCCAGGGACACGGATG
TCTGGAGTCCTCTCCATCTTGCCGCTCGGTTGGGGTGTGTGGAGATGGTG
GAGCTGCTGTTGGCAAAGGGGGCTGACAAAGATTCGTTGGACCAGCACAA
TCGTACGCCGCTCTATCTAGCCACCGAAGGTGATCACGTGGCTGCTGCAC
TAGCTCTCCTGGCTGTCGGTGCGGACGTCAGTATTATGTGCTCCGGGCTA
TTCAAGACGTCGGTGGTGCACATGGCGGCTGAATGGGGGTATCTGGAGAT
CTTAAGGGCGGTGATCGAACATGGGGCGGACCTCGAGGTCGCTGACGAAC
CGAACTATAGAACGGCACTTCATTGTGCGGCCACCAGAGATAGGGTCGAG
GCAATCCATGTGCTCGTGGAGGCTGGGGCCAACATCGAAGCCCAGGGTAA
TGGAGGCCGCACACCTCTTCACTATGCTGCCAGCCACCTC
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