mRNA_L-elsbetiae_contig7473.16363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI) HSP 1 Score: 491 bits (1264), Expect = 2.090e-165 Identity = 243/278 (87.41%), Postives = 262/278 (94.24%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGNLPKKRQEQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKKLG 834 VNPF GT FSW A+ GCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGA+RNWPVVS WSFVLAANAG FEEVLFRGVIQQ LS ++GG+PAL I+SVLFGLAHSPVPGASSF E+CYGA FGLLYMMSGGN+LVP++AHV+YD+LTFLEVHQRATAQL+TTL G+LP+K QE+ NVATVVKKFNLS+KFVDMSYGIFQQLDLDKNG IDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGK++G Sbjct: 113 VNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIG 390
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA) HSP 1 Score: 244 bits (623), Expect = 8.490e-71 Identity = 122/273 (44.69%), Postives = 186/273 (68.13%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGNLPKKRQ------------EQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLL 783 +NP G A S + A+PIF+ SV+LE+S + F++ID+DT+L+VVQ+FGA+R+ + + ++AA+AG+ EE+LFRG+IQ LS +G VPAL +AS+LFGLAH+PVPGASS +E+ YG TFG LY+ +GGN+ P+++H +YD+ TF+EVH RAT+++ G P+ + V V+K++ L FV + G+F LDLDKNG +D++ELQLG+RTFG+F + E+ I + ADL+++ ++FDE+++LL Sbjct: 52 INPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A0G4EAR4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAR4_VITBC) HSP 1 Score: 176 bits (447), Expect = 2.700e-45 Identity = 102/260 (39.23%), Postives = 150/260 (57.69%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSR-VVGGVPA-LGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGNLPKKRQEQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWV 774 ++PF G+ AV G L +LP+ LL+ F+KID+DTK V+ +FG + N P V+ + LA AG EE LFRG + + + GG P+ L I+S LFG+AHSPVPGA +F+E+ YG FG++Y M+ GNI VP++AH YD +TFL VH RAT+++K E P+ +E + +L +F + FQ LDLD +G I ++EL+LGLR F E+ + D D + + F+E++ Sbjct: 117 LDPFFGSHLDQEAVVQGVLWSLPLVAFGFLLDNLPWKIFKKIDRDTKFLVLALFGKEANLPTVALLAATLAGAAGFAEEALFRGTLLPLFNLPLFGGFPSGLLISSFLFGVAHSPVPGADAFLEAVYGLWFGVIYYMADGNIWVPMIAHAFYDFVTFLWVHVRATSRVKQLTESVSPEALREMEMQV----RESLPAEFARFAKATFQMLDLDGSGGITKEELRLGLRVFSNRLRDEDVDNLFAAMDRDGSGQIDFNEFL 372
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A0G4I0J1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0J1_9ALVE) HSP 1 Score: 129 bits (324), Expect = 8.370e-29 Identity = 83/241 (34.44%), Postives = 128/241 (53.11%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGV------------DFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGNLPKK-RQEQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTF 684 V + FS P + G P LV+ L +G+ D+ R+I++DT L+ + + G V +S LA A + EE+ FRGV+ ++ +G +L ++S++FG+ H+ PG S+ +E+ GA FG L++ SGGN+LVP+V H VYD +TF+ H R A+L+ N+ +K +Q A K ++F +FQ LDLDKNG I +EL+ GLR F Sbjct: 77 VGVVLAAVFSLPLQEVLAAGVEPERLVNAALVGAGMAGGFAVLNLLPLDYIREIERDTDLFCLGLMGKDTKPGRVFLYSLALALGASVSEEIFFRGVLLPLGAQYLGEGVSLVVSSLIFGVGHTNTPGGSTLLEAGLGAVFGYLFISSGGNLLVPIVCHFVYDFITFVVSHTRGKARLEGV---NIREKFLSDQVQKAKQFFKEADGEQFAAFCMQVFQLLDLDKNGFISVEELRQGLRVF 314
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A7S0HFR6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HFR6_9CRYP) HSP 1 Score: 96.7 bits (239), Expect = 3.450e-18 Identity = 81/297 (27.27%), Postives = 140/297 (47.14%), Query Frame = 1 Query: 19 TAFSWPAVGLGCL-------GALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVG--GVP--ALGI--ASVLFGLAHSPVPGASSF------MESCYGATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGN-----LPKKRQEQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEW---VRLLALNYSALLQPKAGKK 828 TA + GLG G+LPI + + S F I+ T + +++FG+++N S +L GL EE+ FR + L+R G G P LG+ +S++FGLAH + G+ ++ G FG+LY++SG N+LVP H +YD T ++ H+ +T+QL+ E + LP + ++ N + ++ + S IF D ++G + E++ ++ G + ++AD + ++AL DEW V LL +A + P K+ Sbjct: 15 TAIALGNTGLGIFPLIMIIAGSLPILYLGNKIATSDAKTFIDINFSTNILALKLFGSKKNLLYTFGVSAILGTITGLCEELSFRALGLPILARRFGEAGDPNILLGLLASSLVFGLAHWSIGGSWKDNAVVVPLQILTGFWFGILYVLSGFNLLVPAGVHAIYDAYTLIDAHRTSTSQLQYAQERSSSAKFLPIGQTDEGN---------MQERIIQNSRLIFYLADTSRDGILQLAEIRAAIQQLGYRPDDSLLVSLFKQADNNSDDALDLDEWNVFVELLRQQPAAAIMPAEKKQ 302
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A7S1YIE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIE3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.910e-18 Identity = 73/270 (27.04%), Postives = 135/270 (50.00%), Query Frame = 1 Query: 37 AVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFW-SFVLAANAGLFEEVLFRG----VIQQWLSRVVG----GVPALGIASVLFGLAHSP----VPGASSFMESCY--------GATFGLLYMMSGGNILVPVVAHVVYDVLTFLEVHQRATAQLKTTLEGNLPKKRQEQNNVATVVKKFNLSQKFVDMSYGIFQQLDLDKNGAIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLL 783 ++ LG LG P+ L S +E S ++ T + V+++FG + P+++F+ S L GL EEV FRG + QW + G + + +++++F H+ + G +F+++ GA F LY+ S N+ VP++AH +YD +TF + H Q++ L + + K S++FV+ + F +D +K+G + +KEL++ L ++G S E+ I + ADLD++ A+ F E++ + Sbjct: 105 SLALGVLGLAPLLLFSRQVETSESPLAAGLNLSTNMAVLRLFG-DKPQPILAFFVSVFLGGITGLVEEVTFRGQLLPALAQWSTTAFGVDDGTLFGVALSTLIFAALHANPSGLLKGGDAFLDNLVLLGFQIVTGAIFATLYL-STQNLAVPIIAHSLYDFVTFYKTHLDIAGQMEYASNEKLMPSTEFREEGKW---KTERSEEFVEGARETFYLMDTNKDGVLSRKELRVALFSYGINLSKMESEMIRKVADLDESGAIDFGEFLEFV 369
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: L1IJ81_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ81_GUITC) HSP 1 Score: 90.1 bits (222), Expect = 1.420e-16 Identity = 51/143 (35.66%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 28 SWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATF-GLLYMMSGGNILVPVVAHVVYD 453 S ++GLG +LP+ +S LL+ ++ ++I T+ + ++F + ++ ++ F AG EE+LFRGV+QQ L+ G +PA+ + SV FG AH P + F+ S G+ F G++ + S GN+LVP++AH VYD Sbjct: 84 SLSSIGLGFAWSLPLLAMSSLLQTLDLEPIKEIQALTEAFARKLFSGRPDYQLILF-----CICAGFGEELLFRGVLQQKLAESAGLIPAISLTSVAFGAAHFLTP--TYFLLSFIGSIFFGVVLIQSNGNLLVPIIAHAVYD 219
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A849V270_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A849V270_9GAMM) HSP 1 Score: 88.6 bits (218), Expect = 2.380e-16 Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAQRNWPVVS--FWS--FVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGG-NILVPVVAHVVYDVLTFL 468 +NPF +S A+ G LG +P+FL+ ++LE+ D + ++ F + P + WS F+LAA AG+ EE+LFRGV+Q WL G L ++V+FGL H+ P + + + G GL + G N+L+P++ H +YD L FL Sbjct: 35 INPFATLHYSESAILYGVLGTIPLFLLFLILERITAD---------SVVTIRRFLLESLGPALHRYHWSDLFILAAIAGISEEILFRGVLQPWLESAWGITAGLIASNVIFGLVHAVTP-LYAVLATVVGIYLGLALDIGGDRNLLIPIIIHGLYDFLAFL 185
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A2S6H2B2_9GAMM (Uncharacterized protein n=1 Tax=Methylobacter tundripaludum TaxID=173365 RepID=A0A2S6H2B2_9GAMM) HSP 1 Score: 88.2 bits (217), Expect = 3.230e-16 Identity = 61/176 (34.66%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGA---QRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMS---GG--NILVPVVAHVVYDVLTFLEVHQRATAQLKT 504 +NPF FS A+ G +G +P+FL+ +LLE+ + KI K + Q G + +W + F+LAA AGL EE+LFRGVIQ W+ G AL ++++FGL H+ P + + A G+ +S GG N+L+P++ H +YD L F+ + + A L T Sbjct: 35 INPFADLNFSESAIACGVIGTIPLFLMFLLLEQIQAEPVIKI----KNMLFQTLGPSLHRYHWTDL----FILAAIAGLSEELLFRGVIQPWMESSWGIPAALIGSNIIFGLVHAVTP-----LYAVLAALVGIYLSLSLDYGGDRNLLIPIIIHGLYDFLAFVALMRAYRASLLT 197
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Match: A0A849R1Z3_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A849R1Z3_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 7.390e-16 Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 1 VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGA---QRNWPVVSFWSFVLAANAGLFEEVLFRGVIQQWLSRVVGGVPALGIASVLFGLAHSPVPGASSFMESCYGATFGLLYMMSGG-NILVPVVAHVVYDVLTFLEVHQRATAQLKT 504 +NPF +S A+ G LG +P+FL+ +LLE+ + I + ++++ G+ + +W + F+LAA AG+ EE+LFRGVIQ W+ G L +++LFGL H+ P + + G GL G N+L P++ H +YD L FL + + A L T Sbjct: 35 INPFATLHYSETAILYGILGTIPLFLLFLLLEQISTESVATI----RHFLLETLGSALHRHHWADL----FMLAAIAGISEEILFRGVIQPWMESSWGITAGLIGSNILFGLVHAITP-LYTILAVLVGIYLGLSLDYGGDRNLLTPIIIHGLYDFLAFLALMRSYRASLHT 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7473.16363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7473.16363.1 >prot_L-elsbetiae_contig7473.16363.1 ID=prot_L-elsbetiae_contig7473.16363.1|Name=mRNA_L-elsbetiae_contig7473.16363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp VNPFVGTAFSWPAVGLGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVback to top mRNA from alignment at L-elsbetiae_contig7473:630..9591+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7473.16363.1 ID=mRNA_L-elsbetiae_contig7473.16363.1|Name=mRNA_L-elsbetiae_contig7473.16363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8962bp|location=Sequence derived from alignment at L-elsbetiae_contig7473:630..9591+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7473:630..9591+ >mRNA_L-elsbetiae_contig7473.16363.1 ID=mRNA_L-elsbetiae_contig7473.16363.1|Name=mRNA_L-elsbetiae_contig7473.16363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig7473:630..9591+ (Laminarionema elsbetiae ELsaHSoW15)back to top |