mRNA_L-elsbetiae_contig747.16359.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI) HSP 1 Score: 169 bits (427), Expect = 4.090e-49 Identity = 87/147 (59.18%), Postives = 112/147 (76.19%), Query Frame = 3 Query: 111 SALVDARERTTVTVDASAYDTRTKSDGGCNPSGCSADKSRDQNTRNNSRWSCSEALENDQCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 +ALVDAR+RTTV A+AYD RT GGC+P GC A +RDQ+ ++ SRWSCSE LE+ QC I Y+F+EPQDIV + I+FYKG+ERVR LK+ GS GF + I SSG ++ YE ++INTDET WL+ME L ++W+SI EVRFMV+ Sbjct: 2 TALVDARKRTTVNKWANAYDDRTSEYGGCDPDGCKASLTRDQSWQDESRWSCSEKLEDAQCKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFMVD 148
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.180e-27 Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 114 ALVDARERTTVTVDASAYDTRTKSDGGCNPSGCSADKSRDQNTRNNSRWSCSEALENDQCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRF 542 ALVDAR+RT V A+AYD RT GGC+P GC A +RD++ ++ SRWSCSE LE+ QC I Y F+EPQDIV ++K+ G F + I SSG ++ YE ++INTDET WL+ME L ++W+SI EVR Sbjct: 607 ALVDARKRTAVKKWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDESRWSCSEKLEDAQCNITYNFEEPQDIV--------------RIKINGE--FKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEVRI 733
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.410e-16 Identity = 64/154 (41.56%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 120 VDARERTTVTVDASAYDTR---TKSDGGCNPSGCSADKSRD----QNTRNNSRWSCSEALEND--QCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIES-SGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 V+A +TTV V A+AYD R + D GC GC D + D ++T SRWSC+E + D QC I + FD PQDI + + F+KG+ER R LKV +G E ES G+T + F I + + ME G+ +DW+S+ EVRFMV+ Sbjct: 252 VEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTE--SRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMVD 401
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.250e-13 Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 252 SRWSCSEALEND--QCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIES-SGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 SRWSC+E + D QC I + FD PQDI + + F+KG+ER R LKV +G E ES G+T + F I + + ME G+ ++DW+S+ EVRFMV+ Sbjct: 19 SRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMVD 119
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.800e-12 Identity = 54/143 (37.76%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 120 VDARERTTVTVDASAYDTRTKSDGGCNPSGCSADKSRDQNTRNNSRWSCSEALENDQCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMV 548 V+A +VT AS YD R DGGC+PSGC D +RD + SRWSC+ L +CTI Y D+ L + +KG ER +KV SSG T+G+E +++ L + G L ++WLSI E MV Sbjct: 170 VEASTLGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTASRWSCAPTL-GGECTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGV-LDDSEWLSIIEAEIMV 310
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.880e-12 Identity = 59/151 (39.07%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 111 SALVDARERTTVTVDASAYDTR-TKSDGGCNPSGCSADKSRDQN-TRNNSRWSCSEALEN--DQCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 +A+V+A TVTV A YDT T SDGGC+P+GC D +RD + T SRWSC AL + C I Y + L+I YKG+ER R L++ SSG T +E ++T W+++ G L ++WLSI EV +V+ Sbjct: 23 AAVVEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFETIEVDT-MGRWIDIVGV-LEDSEWLSIMEVEILVD 171
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 6.390e-12 Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 120 VDARERTTVTVDASAYDTRT-KSDG--GCNPSG---CSADKSRDQ-NTRNNSRWSCSEALENDQ--CTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMV 548 V+ +T V+V A+A+D R +S G GC +G C+A+ +RD +T SRWSC+ L +D+ C I + F EPQ+IV + + F+KGNERVR L+V +G ES ++ + + +E + +E L SN+W+S+ EV V Sbjct: 154 VEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADST-FNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFV 304
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 8.290e-12 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 3 Query: 144 VTVDASAYDTRTKSDGGCNPSGCSADKSRDQNTRNNSRWSCSEALENDQCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 VTV+AS YD DGGC+PSGC AD +RD + SRWSC+ L +CTI Y ++ L + YKG ER ++V SSG T+ E +++ + + G L ++WLSI EV MVE Sbjct: 206 VTVEASFYDPSLTVDGGCDPSGCVADNTRDGDLSTASRWSCAPTL-GGECTISYDLGTVYELDELRLAMYKGTERQVTMEVRVDDTLVTTWTSSGTTDDLEAIDLSGTSGQTVEITGV-LDDSEWLSIVEVEIMVE 339
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 3.310e-10 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 117 LVDARERTTVTVDASAYDTR---TKSDGGCNPSGCSADKSRDQNTRN-NSRWSCSEALEND--QCTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGG-FNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMVE 551 LV+A T + A+ +D R D GC GC + D T + SRWSC+E + D QC I + F PQ++ L + F+KG ER R LKV +G F E G+ Y F++ + + +E GL +++W+S+ EV FMVE Sbjct: 191 LVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSY--FDVIAYDVHTVTLESLGLDTDEWISLLEVIFMVE 340
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 8.270e-9 Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 120 VDARERTTVTVDASAYDTRTKS---DGGCNPSG---CSADKSRDQNTRN-NSRWSCSEALENDQ--CTIMYQFDEPQDIVALDIQFYKGNERVRKLKVTGSGGFNEEIESSGNTNGYERFNINTDETAWLNMEGQGLGSNDWLSIKEVRFMV 548 V+ +T V V A+A+D R +S D GC G C+A +RD + SRWSC+ L D+ C I + F EPQ++V + + F+KGNER R L V +G ES ++ + + E + + +E L S++W+S+ EV V Sbjct: 459 VEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADST-FNTLGVTATEASTVMLESVALLSDEWISLLEVLIFV 609 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig747.16359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig747.16359.1 >prot_L-elsbetiae_contig747.16359.1 ID=prot_L-elsbetiae_contig747.16359.1|Name=mRNA_L-elsbetiae_contig747.16359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MRCFAVLALVSAAVLNSASALVDARERTTVTVDASAYDTRTKSDGGCNPSback to top mRNA from alignment at L-elsbetiae_contig747:28441..31031- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig747.16359.1 ID=mRNA_L-elsbetiae_contig747.16359.1|Name=mRNA_L-elsbetiae_contig747.16359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2591bp|location=Sequence derived from alignment at L-elsbetiae_contig747:28441..31031- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig747:28441..31031- >mRNA_L-elsbetiae_contig747.16359.1 ID=mRNA_L-elsbetiae_contig747.16359.1|Name=mRNA_L-elsbetiae_contig747.16359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig747:28441..31031- (Laminarionema elsbetiae ELsaHSoW15)back to top |