mRNA_L-elsbetiae_contig7386.16262.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: D7G7Q0_ECTSI (RNA methyltransferase, TrmA family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q0_ECTSI) HSP 1 Score: 498 bits (1281), Expect = 1.500e-173 Identity = 246/273 (90.11%), Postives = 261/273 (95.60%), Query Frame = 1 Query: 1 RVKFPTVYHGVDLGNVNPSKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQDTRK 804 +VKFPT+YHGVDLGNVNPSKVVDVE+CPLAT+GINE+LP AR++ARERV AFDSG+GKR+GKRGATLLFRETTEEGTVTDNNAHVSERV G KAGEFFQNNPYVLPHMV+YVVARA+EGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAA+N+ISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCD LFLGQLFKFRP+RLVYVSCDPATQARDAKEI+A GYEAVDIQPFDLFPQTRHIENVITFQD RK Sbjct: 242 KVKFPTIYHGVDLGNVNPSKVVDVERCPLATEGINESLPPARQEARERVQAAFDSGDGKRVGKRGATLLFRETTEEGTVTDNNAHVSERVGGMVFNFKAGEFFQNNPYVLPHMVDYVVARAKEGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAATNDISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDQLFLGQLFKFRPTRLVYVSCDPATQARDAKEIMANGYEAVDIQPFDLFPQTRHIENVITFQDNRK 514
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A6H5JJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK5_9PHAE) HSP 1 Score: 344 bits (883), Expect = 5.570e-118 Identity = 168/176 (95.45%), Postives = 173/176 (98.30%), Query Frame = 1 Query: 277 KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQDTRK 804 KAGEFFQNNPYVLPHMV+YVVARA+EGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAA+N+ISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCD LFLGQLFKFRP+RLVYVSCDPATQARDAKEI A GYEAVDIQPFDLFPQTRHIENVITFQDTRK Sbjct: 11 KAGEFFQNNPYVLPHMVDYVVARAKEGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAATNDISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDQLFLGQLFKFRPTRLVYVSCDPATQARDAKEITANGYEAVDIQPFDLFPQTRHIENVITFQDTRK 186
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A835YJC5_9STRA (RNA methyltransferase, TrmA family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC5_9STRA) HSP 1 Score: 295 bits (756), Expect = 4.370e-95 Identity = 161/272 (59.19%), Postives = 189/272 (69.49%), Query Frame = 1 Query: 1 RVKFPTVYHGVDLGNVNPSKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAR-EGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIF--ANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQ 792 R+ FPT++H +D+ V+ K++DV QCP+A AR R+ AF +G R +GATLL R +EG V DN V+E V+G AGEFFQNNPYVLP MVE+V+ARAR +G K LIDAYCGGGLF L AS F+ CAG+E+SP AV+CATRNA N I NC FL GTAS IF A F T VIVDPPRKGCD++FL QLF F P R+VYVSCDPATQARDAK+IVA GYE D+ PFDLFPQTRHIENVITF+ Sbjct: 171 RLPFPTLFHDIDIETVDTQKILDVPQCPIAA---------ARARVRDAAAAAFAAGRA-RFKSKGATLLLRHV-KEGVVYDNKELVTEEVSGLTFKFTAGEFFQNNPYVLPSMVEHVLARARGDGDVKFLIDAYCGGGLFALCASRHFDACAGVEVSPAAVECATRNAQLNGIENCTFLQGTASAIFDSAQQLFDALSTAVIVDPPRKGCDEVFLAQLFAFAPRRVVYVSCDPATQARDAKDIVAAGYEITDVTPFDLFPQTRHIENVITFE 431
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A7S3USM6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USM6_HETAK) HSP 1 Score: 290 bits (743), Expect = 1.230e-92 Identity = 157/287 (54.70%), Postives = 189/287 (65.85%), Query Frame = 1 Query: 1 RVKFPTVYH----GVDLGNVNPSKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGE---GKRLGKR------GATLLFRETTEEGTVTDNNAHVSERVNG-------KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQDTR 801 R+ PT+Y G+DL V+ +++DV +C +AT IN L R + R V SGE K+ GKR GATLL R+ + G TD V E V G KAGEFFQNNP+VLPHMVEYV+ +A+ G L+D YCGGGLFCLSAS FE+CAG+EIS ++ A RNAA N++ NC F+AG + NIF NV+F P ET +I+DPPRKGCD FL QLF F P+R+VYVSCDPATQARD K +V GY DIQPFDLFPQTRHIENVITF R Sbjct: 165 RMTMPTIYELEQRGIDLSTVDRREILDVARCEIATDAINARLGSLRAETRALVAGQL-SGEIEVPKKKGKRKHSRPMGATLLLRDALD-GVETDQTKDVYEEVRGVGLRFEFKAGEFFQNNPFVLPHMVEYVLNKAKAPGVTKLLDTYCGGGLFCLSASPHFEECAGVEISEASIASAKRNAALNKLDNCNFIAGRSENIFGNVTFNPEETAIIIDPPRKGCDQKFLDQLFAFSPARVVYVSCDPATQARDTKIMVEAGYAVTDIQPFDLFPQTRHIENVITFDGPR 449
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A7S2UUU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUU9_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.230e-83 Identity = 151/308 (49.03%), Postives = 187/308 (60.71%), Query Frame = 1 Query: 1 RVKFPTVYH----GVDLGNVNPSKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKR------------------LGKRGATLLFRETTEEGTVTDNNAHVSERVNG-------KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEIS-----------------------NCLFLAGTASNIFAN--VSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQT 762 R+K PT+Y+ GVDL + +KV+D EQCP+AT+ INE LP R + R+R+ + ++ K+ G TLL RET E G VTD A V ERV G KAGEFFQNNP+VLPHM+E+VV+ AR G +LIDAYCGGGLFCL A+ F++ AG+EIS AV CA RNA N IS C F+AGTAS IF F P +T +I+DPPRKGCDD FL QLF F P+R+VYVSCDPATQARD ++IV G++ +D+ PFDLFPQT Sbjct: 39 RMKLPTLYYLEKRGVDLSTLPMNKVLDAEQCPIATQAINERLPSLRLETRDRIRKKYEDDMKKKAEGVEEEKPKKTPRKRRNFHNMGETLLLRETLE-GVVTDPKAVVHERVKGIGLEFEFKAGEFFQNNPFVLPHMIEHVVSWARAPGVDHLIDAYCGGGLFCLCAAPHFKELAGVEISGTAVACAQRNARRNGISAEQEGEGAAGAEVQEVNHIPGAGKCRFVAGTASTIFGPGVEHFPPHQTAIILDPPRKGCDDEFLNQLFAFGPARVVYVSCDPATQARDTRKIVEAGFKILDVTPFDLFPQT 345
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A4D9D5L4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5L4_9STRA) HSP 1 Score: 263 bits (673), Expect = 6.700e-83 Identity = 144/254 (56.69%), Postives = 177/254 (69.69%), Query Frame = 1 Query: 61 VVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVS-FTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQDTRK 804 +VDV +C +AT IN L RE+ R A E R K GATLL RET E G VTD A VS++V G AG FFQNNPYVLPHMVEYVV +A + L+DAYCGGGLFCLSAS +FE C G+EIS +A+ A RNA N+I NC F AG A++IFA + + ++TV I+DPPRKGCD+ FL QL +FRP+R+VYVSCDPATQARDA+ ++ GY+ ++QPFDLFPQTRHIENVI F + + Sbjct: 146 LVDVPECAIATPAINARLRGLREEVRV-TARAAAVAETPRKPK-GATLLLRETRE-GVVTDPRAEVSDQVGGLLFKYTAGSFFQNNPYVLPHMVEYVVRKAGAPNVRYLVDAYCGGGLFCLSASKNFEACYGVEISELAILSAQRNAELNKIGNCHFQAGDATDIFAGIGHISGADTVTILDPPRKGCDEGFLTQLCRFRPARIVYVSCDPATQARDARFLLERGYDIEEVQPFDLFPQTRHIENVIVFVEAHR 396
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A317ZGC5_9BACT (SAM-dependent methyltransferase n=2 Tax=Coraliomargarita sinensis TaxID=2174842 RepID=A0A317ZGC5_9BACT) HSP 1 Score: 263 bits (672), Expect = 7.510e-83 Identity = 141/249 (56.63%), Postives = 171/249 (68.67%), Query Frame = 1 Query: 55 SKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVIT 786 +++VDV+QCP+AT+ INEALP+ARE+AR R G GK+ KRG TLL R E G VTD VSERV KAGEFFQNNPY+LP +VEYV A A GA+ L+DAYCG GLF LS + +FE+ AG+EIS AV A NA + + N F+ G A IF + F ET +++DPPRKGCD+ F QL +RP RLVYVSCDPATQARD KE +A GY+ IQPFDLFP TRHIENV++ Sbjct: 165 NQIVDVQQCPIATEAINEALPEAREEAR-RAG-------GKKRRKRGGTLLMRHVLE-GVVTDPQEIVSERVGEVCFQFKAGEFFQNNPYILPELVEYVAAEAASEGARYLVDAYCGVGLFALSTAKNFEQVAGVEISEPAVRWAQANAKISNVKNARFVIGKAEAIFNGLKFPAGETAMVIDPPRKGCDESFRQQLLAYRPQRLVYVSCDPATQARDLKEFIAGGYQITRIQPFDLFPHTRHIENVVS 404
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: A0A424QZZ2_9BACT (Class I SAM-dependent RNA methyltransferase n=2 Tax=Puniceicoccaceae TaxID=415002 RepID=A0A424QZZ2_9BACT) HSP 1 Score: 261 bits (667), Expect = 5.200e-82 Identity = 141/247 (57.09%), Postives = 168/247 (68.02%), Query Frame = 1 Query: 61 VVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVIT 786 +VDVE CP+AT+ INE LP AR +ARE SG GK+ +RG TLL R E G VTD A VSERV G +AGEFFQNNPY+LP MV+YV+ A+ GG + L+DAYCG GLF LSA++SF + AG+E+S AV A N + I N FL G A IF +SF P ET VI+DPPRKGCD F QL +RP+R+VYVSC+PATQ RD +E + GY IQPFDLFP TRHIENVIT Sbjct: 168 IVDVESCPIATQAINEVLPGARAEARE-------SG-GKKRRQRGGTLLLRHVLE-GVVTDPKAVVSERVGGLTFQFRAGEFFQNNPYILPQMVDYVIGEAKFGGVQYLVDAYCGSGLFALSAASSFTQVAGVEVSDQAVLWAQANCRISRIENARFLIGKAEAIFKGLSFLPEETTVIIDPPRKGCDASFRDQLMGYRPARVVYVSCNPATQTRDVEEFLQSGYRIERIQPFDLFPHTRHIENVIT 405
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: D5ENM2_CORAD (RNA methyltransferase, TrmA family n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5ENM2_CORAD) HSP 1 Score: 261 bits (666), Expect = 6.190e-82 Identity = 144/249 (57.83%), Postives = 170/249 (68.27%), Query Frame = 1 Query: 55 SKVVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVIT 786 +++VDVEQCP+AT+ INEALP+ARE+AR SG GK+ +RG TLL R E G VTD A VSERV KAGEFFQNNP++LP MV+YV A A GA+ L+DAYCG GLF LS + SFE+ AG+E+S AV A N + ISN FL G A IF + F ET +I+DPPRKGCD+ F QL +FRP RLVYVSCDPATQARD K V GY IQPFDLFP TRHIENV++ Sbjct: 166 NQIVDVEQCPIATREINEALPEAREEARL-------SG-GKKRRQRGGTLLLRHVLE-GVVTDPKAVVSERVRDVTFQFKAGEFFQNNPFILPKMVDYVEAEASADGARYLVDAYCGSGLFALSTAKSFEQVAGVEVSDQAVLWAQANCRISGISNARFLIGKAEAIFNGLKFPADETALIIDPPRKGCDESFRLQLLQFRPQRLVYVSCDPATQARDVKAFVDGGYRVTRIQPFDLFPHTRHIENVVS 405
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Match: W7TEN0_9STRA (Rna family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEN0_9STRA) HSP 1 Score: 263 bits (673), Expect = 3.620e-81 Identity = 144/254 (56.69%), Postives = 177/254 (69.69%), Query Frame = 1 Query: 61 VVDVEQCPLATKGINEALPQAREDARERVGEAFDSGEGKRLGKRGATLLFRETTEEGTVTDNNAHVSERVNG-----KAGEFFQNNPYVLPHMVEYVVARAREGGAKNLIDAYCGGGLFCLSASTSFEKCAGIEISPMAVDCATRNAASNEISNCLFLAGTASNIFANVS-FTPSETVVIVDPPRKGCDDLFLGQLFKFRPSRLVYVSCDPATQARDAKEIVAEGYEAVDIQPFDLFPQTRHIENVITFQDTRK 804 +VDV +C +AT IN L RE+ R A E R K GATLL RET E G VTD A VS++V G AG FFQNNPYVLPHMVEYVV +A + L+DAYCGGGLFCLSAS +FE C G+EIS +A+ A RNA N+I NC F AG A++IFA + + ++TV I+DPPRKGCD+ FL QL +FRP+R+VYVSCDPATQARDA+ ++ GY+ ++QPFDLFPQTRHIENVI F + + Sbjct: 296 LVDVPECAIATPAINARLRGLREEVRV-TARAAAVAETPRKPK-GATLLLRETRE-GVVTDPRAEVSDQVGGLLFKYTAGSFFQNNPYVLPHMVEYVVRKAGAPNVRYLVDAYCGGGLFCLSASKNFEACYGVEISELAILSAQRNAELNKIGNCHFQAGDATDIFAGIGHISGADTVTILDPPRKGCDEGFLTQLCRFRPARIVYVSCDPATQARDARFLLERGYDIEEVQPFDLFPQTRHIENVIVFVEAHR 546 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7386.16262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7386.16262.1 >prot_L-elsbetiae_contig7386.16262.1 ID=prot_L-elsbetiae_contig7386.16262.1|Name=mRNA_L-elsbetiae_contig7386.16262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp RVKFPTVYHGVDLGNVNPSKVVDVEQCPLATKGINEALPQAREDARERVGback to top mRNA from alignment at L-elsbetiae_contig7386:4487..9661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7386.16262.1 ID=mRNA_L-elsbetiae_contig7386.16262.1|Name=mRNA_L-elsbetiae_contig7386.16262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5175bp|location=Sequence derived from alignment at L-elsbetiae_contig7386:4487..9661- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7386:4487..9661- >mRNA_L-elsbetiae_contig7386.16262.1 ID=mRNA_L-elsbetiae_contig7386.16262.1|Name=mRNA_L-elsbetiae_contig7386.16262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1620bp|location=Sequence derived from alignment at L-elsbetiae_contig7386:4487..9661- (Laminarionema elsbetiae ELsaHSoW15)back to top |