mRNA_L-elsbetiae_contig736.16231.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig736.16231.1
Unique NamemRNA_L-elsbetiae_contig736.16231.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: D8LM69_ECTSI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM69_ECTSI)

HSP 1 Score: 451 bits (1159), Expect = 3.000e-157
Identity = 214/236 (90.68%), Postives = 230/236 (97.46%), Query Frame = 3
Query:  453 MMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRVGSCADEDEE 1160
            MMAEECILVDR+DRPTG ASKVETHLTSKGL+LHRAFSVFLFDK+GR+LMQRRADSKHTFAG+WTNTCCSHPLWNDVEMGTD+TTP+G+K+ASEGDAAI GATRAAVRKLGQELGI A QLPLEDFSFLTKVHYIANSGSTWGEHEIDYV+LIQADVDL+PNPNEVSDAEFLDK+GLRSLLA AERGEVEFTPWSAY+IDKFVFGWWDHVGDK+KLAS RDS+IHRVGSCADE+EE
Sbjct:    1 MMAEECILVDRNDRPTGSASKVETHLTSKGLLLHRAFSVFLFDKKGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDVEMGTDMTTPRGEKSASEGDAAIAGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVYLIQADVDLEPNPNEVSDAEFLDKDGLRSLLARAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASLRDSVIHRVGSCADEEEE 236          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A835Z702_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z702_9STRA)

HSP 1 Score: 290 bits (742), Expect = 4.300e-93
Identity = 142/247 (57.49%), Postives = 176/247 (71.26%), Query Frame = 3
Query:  411 FAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEG-DAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANS-GSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRVGSCA 1145
            F +ELG +D EQAAMM E CI+VDRDD+P   A+KV+ HL S+GL LHRAFSVFLFD  GR+L+QRRA SKHTF G+WTN CCSHPLWND EMG D     GD ++S   +AA  GA RAA RKL QELG+ A QLP      +T++HY A S    WGEHE+DY+FL QADVD+ PN NEV++A ++ +  LR+LLA A+ G+  FTPWS ++ID F   WWD +G+   L +  D +IHRVG CA
Sbjct:   55 FTDELGQIDPEQAAMMEELCIVVDRDDKPLAPATKVQAHLCSEGLALHRAFSVFLFDSSGRMLLQRRALSKHTFPGYWTNACCSHPLWNDFEMGLD-----GDADSSSALEAAARGARRAAARKLEQELGVPAGQLPESALRLMTRIHYRAESEDGVWGEHEVDYIFLAQADVDVAPNANEVAEAAYVTRAELRALLARADAGDARFTPWSRHVIDAFAHAWWDALGNAAALDALADEVIHRVGDCA 296          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A7S2UUE2_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE2_9STRA)

HSP 1 Score: 263 bits (671), Expect = 6.360e-82
Identity = 134/246 (54.47%), Postives = 172/246 (69.92%), Query Frame = 3
Query:  423 LGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDA-EFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRD--SLIHRVGSCADE 1151
            +G  D+EQ  MM E  I VDR D+  G ASK ETHL S GL LHRAFSVFLFD +GR+L+Q+R+  K TF  +WTNTCCSHPL    E+GTD+    G  N  +  AA  G  RAA+RKL QELGIS  +L ++DF +LTK+HYIANS   WGEHE+DYVF  Q DV+L+ N NEV D  +++  + LR ++ +A+RGE++ TPWS Y+ID+F+F WW  VGD+  L +  D  S+IHRVG CA+E
Sbjct:   69 VGQYDDEQIQMMEERVITVDRHDKVVGEASKAETHLVSHGLKLHRAFSVFLFDTQGRLLLQQRSRDKITFPWYWTNTCCSHPLSVPSELGTDVL-EAGTHNQDQ--AATLGCQRAAIRKLEQELGISPSELSVDDFIYLTKIHYIANSDPDWGEHEVDYVFFAQKDVNLNLNLNEVEDVVKYVTADELRDMMDQADRGEIKLTPWSRYIIDEFIFKWWPLVGDRKALEAQADDFSVIHRVGPCAEE 311          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: B8MES9_TALSN (Isopentenyl-diphosphate Delta-isomerase n=7 Tax=Eurotiales TaxID=5042 RepID=B8MES9_TALSN)

HSP 1 Score: 224 bits (571), Expect = 1.040e-67
Identity = 116/225 (51.56%), Postives = 147/225 (65.33%), Query Frame = 3
Query:  420 ELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLT---SKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVG 1085
            +L   DEEQ  +M E CI++D DDRP G ASK   HL    S+GL LHRAFSVFLFD + R+L+Q+RA  K TF   WTNTCCSHPL    E G +L+            AA+ G  RAAVRKL QELGI A+Q+PL+ F FLT++HY+A S   WGEHEIDY+  IQADVD++PNPNEV D +++  E L+S+ A      ++FTPW   + +  +F WW H G
Sbjct:   47 DLDGYDEEQVRLMEEVCIVLDNDDRPIGSASKKACHLMTNISRGL-LHRAFSVFLFDSQNRLLLQQRAAEKITFPDLWTNTCCSHPLGIAGETGAELS------------AAVEGVKRAAVRKLDQELGIKAEQVPLDKFKFLTRIHYLAPSDGKWGEHEIDYILFIQADVDINPNPNEVQDTKYVTPEDLKSMFANPA---LKFTPWFKLICNTMLFEWWSHFG 255          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: R7QIF2_CHOCR (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIF2_CHOCR)

HSP 1 Score: 222 bits (565), Expect = 6.820e-67
Identity = 115/241 (47.72%), Postives = 154/241 (63.90%), Query Frame = 3
Query:  435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGS-TWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGE-VEFTPWSAYMIDKFVFGWWDHVGDKDK--LASFRDS-LIHRVGSC 1142
            DE QA +M+EE ILV   D   G+ SK ++HL S  L LHRAFS+FLFD  GR+L+QRRA  K TF  +WTNT CSHPL N  E+G +           +GD ++ GA RAA+RKLG ELG+    L + D +F+T+VHY A +G   WGEHE+DYVF+ Q DV+L P PNEVSD  ++D++ L+ L AEAE+ E    TPW  ++++ F + WWD + +K    L   RD   +H +G C
Sbjct:   26 DETQAQLMSEEIILVSPADAVIGKMSKKDSHLVSNNLPLHRAFSLFLFDSAGRMLLQRRAAEKVTFPSYWTNTVCSHPLHNAAELGEE-----------DGDDSVVGAKRAAIRKLGHELGVKEGSLGIADLTFMTRVHYRAENGDGVWGEHEVDYVFVAQRDVELRPEPNEVSDVRYVDQKELKELFAEAEKSEGTLLTPWFQHIVNGFGWPWWDSLLEKGPPGLEGLRDPHTVHHMGDC 255          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A1Y2CTN6_9FUNG (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CTN6_9FUNG)

HSP 1 Score: 219 bits (557), Expect = 3.240e-66
Identity = 112/236 (47.46%), Postives = 154/236 (65.25%), Query Frame = 3
Query:  435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRV 1133
            DEEQ  +M+E CILVD +D+P G  SK E HL +   KGL LHRAFSVFLF+ EG++L+Q+RAD K TF G++TNTCCSHPL    E+                +A   GA RAA RKL  ELGI A+Q+PL+ F FLTK+ Y+A S   WGEHEIDY+F ++ADVDL+PNPNEV   +++ ++ L+ + A  ++  +  TPW   + + F++ WWD++ +   LA     +IHR+
Sbjct:   10 DEEQVRLMSEMCILVDTNDKPIGAESKKECHLMTNINKGL-LHRAFSVFLFNSEGKLLLQQRADEKITFPGYYTNTCCSHPLAVQDEVE---------------EAEQIGARRAAQRKLEHELGIKAEQVPLDKFQFLTKIQYLAPSDGLWGEHEIDYIFFVKADVDLEPNPNEVKSVKYITQDELKQMFATMDQTGISMTPWFKLICENFLYKWWDNLDNVTSLAE--PDVIHRM 227          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: C3Z399_BRAFL (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z399_BRAFL)

HSP 1 Score: 216 bits (551), Expect = 2.660e-65
Identity = 112/237 (47.26%), Postives = 149/237 (62.87%), Query Frame = 3
Query:  432 LDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRV 1133
            LD+ Q  ++ E+CIL+D +D+ TG  +K   HL     KGL LHRAFSVFLF+ +G +L+Q+R+D K TF G++TNTCCSHPL    E+                +A   G  RAA RKL  ELGISADQ+PLEDF FLT++HY A S   WGEHEIDY+  IQ +VD++PNPNEV   ++++KE LR  L  A+      TPW   ++D+F++ WWD + D D L       IHR+
Sbjct:    9 LDDTQVKLLGEQCILIDENDKVTGFETKKNCHLNENIKKGL-LHRAFSVFLFNSKGELLLQQRSDEKITFPGYFTNTCCSHPLNLPDELE---------------EAQAMGVLRAAQRKLDHELGISADQVPLEDFHFLTRIHYRAESDGRWGEHEIDYILFIQKEVDVNPNPNEVKTFQYINKEQLRHFLETAKEEGRPITPWFQLIVDRFLYSWWDKLHDVDSLKD--QDTIHRI 227          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A7C8PEN1_ORBOL (Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Orbiliaceae TaxID=47021 RepID=A0A7C8PEN1_ORBOL)

HSP 1 Score: 220 bits (560), Expect = 2.880e-65
Identity = 119/239 (49.79%), Postives = 148/239 (61.92%), Query Frame = 3
Query:  408 AFAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRD 1115
            A + EL   D EQ  +M E CI++D DD+P G ASK   HL +   KGL LHRAFSVFLFD EGR+L+Q+RAD K TF G WTNTCCSHPL    E G  L            +AAI G  RAA RKL QELGI A Q+PL+DF FLT++HY A S   WGEHEIDY+  IQ  VDL PNPNEV D +++  + L+ +  +     + FTPW   + +  +F WW  + D  K A+ +D
Sbjct:  106 ARSSELEGYDAEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGL-LHRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIPAKQVPLDDFEFLTRIHYKAPSNGIWGEHEIDYILFIQTTVDLAPNPNEVKDTKYVTADELKEMFQDPA---LSFTPWFKLICETMLFEWWGSLKDLSKYANEQD 328          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A1S9RUA6_PENBI (Isopentenyl-diphosphate Delta-isomerase n=5 Tax=Penicillium TaxID=5073 RepID=A0A1S9RUA6_PENBI)

HSP 1 Score: 218 bits (554), Expect = 3.650e-65
Identity = 113/229 (49.34%), Postives = 146/229 (63.76%), Query Frame = 3
Query:  408 AFAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVG 1085
            A + EL   DEEQ  +M E CI+ D DDRP G ASK   HL +   KGL LHRAFSVFLFD + R+L+Q+RA  K TF   WTNTCCSHPL    E G +L            DAA+ G  RAA RKL  ELGI A+Q+PL+ F F T++HY A S   WGEHE+DY+  IQADVDL+P+PNEV D +++  + L+++    E+  ++FTPW   + +  +F WW H+G
Sbjct:   43 AQSSELVGYDEEQVRLMEEVCIVTDNDDRPIGSASKKTCHLMTNIDKGL-LHRAFSVFLFDSKNRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGAEL------------DAAVMGVKRAAQRKLDHELGIKAEQVPLDKFEFFTRIHYKAPSDGKWGEHEVDYILFIQADVDLEPSPNEVRDTKYVSADELKAMF---EQPGLKFTPWFKLICNSMLFEWWSHLG 255          
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A0E9NIV4_SAICN (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NIV4_SAICN)

HSP 1 Score: 216 bits (551), Expect = 4.020e-65
Identity = 108/236 (45.76%), Postives = 151/236 (63.98%), Query Frame = 3
Query:  435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTSK--GLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSL-IHRV 1133
            D EQ  +M E CI++D +D+P G ASK   HL       +LHRAFSVFLFD+E R+L+Q+RAD K TF G WTNTCCSHPL    E G+DL             +A+ G  RAA+RKL QELGI A Q+P++ F++LT++HY+A S   WGEHEIDY+  I+  V    NPNE+ D +++ +E ++S+  +    E +FTPW   + + F+F WW  + +KD LA+ +D   IH++
Sbjct:   18 DPEQVKLMEEVCIVIDENDKPLGSASKKTCHLMENINNNLLHRAFSVFLFDEENRLLLQQRADEKITFPGMWTNTCCSHPLSIPSETGSDL------------PSAVLGVKRAAIRKLDQELGIPASQVPIDKFTYLTRIHYVAPSDGLWGEHEIDYILFIRVPVTHAANPNEIKDVKYVSREEMQSMFVDPAY-EGKFTPWFKLICETFLFKWWKELEEKDDLAAVKDEENIHKL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM69_ECTSI3.000e-15790.68Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ec... [more]
A0A835Z702_9STRA4.300e-9357.49Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tr... [more]
A0A7S2UUE2_9STRA6.360e-8254.47Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fi... [more]
B8MES9_TALSN1.040e-6751.56Isopentenyl-diphosphate Delta-isomerase n=7 Tax=Eu... [more]
R7QIF2_CHOCR6.820e-6747.72Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ch... [more]
A0A1Y2CTN6_9FUNG3.240e-6647.46Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rh... [more]
C3Z399_BRAFL2.660e-6547.26Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Br... [more]
A0A7C8PEN1_ORBOL2.880e-6549.79Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Or... [more]
A0A1S9RUA6_PENBI3.650e-6549.34Isopentenyl-diphosphate Delta-isomerase n=5 Tax=Pe... [more]
A0A0E9NIV4_SAICN4.020e-6545.76Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig736contigL-elsbetiae_contig736:21009..26524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.4
Seed ortholog evalue4.1e-124
Seed eggNOG ortholog2880.D8LM69
Preferred nameIDI1
KEGG rclassRC00455
KEGG koko:K01823,ko:K21773
KEGG ReactionR01123
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04218,map00900,map01100,map01110,map01130,map04218
KEGG ModuleM00095,M00096,M00364,M00365,M00366,M00367
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000287,GO:0003006,GO:0003674,GO:0003824,GO:0004452,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005777,GO:0005829,GO:0006066,GO:0006629,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009507,GO:0009536,GO:0009791,GO:0009889,GO:0009890,GO:0009892,GO:0009908,GO:0009987,GO:0010033,GO:0010894,GO:0014070,GO:0016114,GO:0016125,GO:0016126,GO:0016853,GO:0016860,GO:0016863,GO:0019216,GO:0019218,GO:0019222,GO:0019637,GO:0022414,GO:0030145,GO:0032501,GO:0032502,GO:0035634,GO:0042221,GO:0042579,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0045540,GO:0045541,GO:0045833,GO:0045939,GO:0046165,GO:0046490,GO:0046872,GO:0046890,GO:0046914,GO:0048367,GO:0048519,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050810,GO:0050896,GO:0051055,GO:0061458,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0080090,GO:0090181,GO:0090206,GO:0090407,GO:0090567,GO:0106118,GO:0106119,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930,GO:1902931
EggNOG free text desc.isopentenyl-diphosphate delta-isomerase activity
EggNOG OGsCOG1443@1,KOG0142@2759
EC5.3.3.2
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionisopentenyl-diphosphate delta-isomerase type 1
Ec32 orthologEc-18_002690.1
Exons6
Model size1175
Cds size1161
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.3438363-CDS-L-elsbetiae_contig736:21008..212361622816819.3438363-CDS-L-elsbetiae_contig736:21008..21236Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 21009..21236 -
1691683837.7520044-CDS-L-elsbetiae_contig736:21008..212361691683837.7520044-CDS-L-elsbetiae_contig736:21008..21236Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 21009..21236 -
1622816819.3563285-CDS-L-elsbetiae_contig736:21480..215821622816819.3563285-CDS-L-elsbetiae_contig736:21480..21582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 21481..21582 -
1691683837.7664173-CDS-L-elsbetiae_contig736:21480..215821691683837.7664173-CDS-L-elsbetiae_contig736:21480..21582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 21481..21582 -
1622816819.3698509-CDS-L-elsbetiae_contig736:22551..227351622816819.3698509-CDS-L-elsbetiae_contig736:22551..22735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 22552..22735 -
1691683837.7765322-CDS-L-elsbetiae_contig736:22551..227351691683837.7765322-CDS-L-elsbetiae_contig736:22551..22735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 22552..22735 -
1622816819.3805885-CDS-L-elsbetiae_contig736:23200..233461622816819.3805885-CDS-L-elsbetiae_contig736:23200..23346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 23201..23346 -
1691683837.7861967-CDS-L-elsbetiae_contig736:23200..233461691683837.7861967-CDS-L-elsbetiae_contig736:23200..23346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 23201..23346 -
1622816819.3907928-CDS-L-elsbetiae_contig736:25442..257291622816819.3907928-CDS-L-elsbetiae_contig736:25442..25729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 25443..25729 -
1691683837.7976348-CDS-L-elsbetiae_contig736:25442..257291691683837.7976348-CDS-L-elsbetiae_contig736:25442..25729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 25443..25729 -
1622816819.4008358-CDS-L-elsbetiae_contig736:26296..265101622816819.4008358-CDS-L-elsbetiae_contig736:26296..26510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 26297..26510 -
1691683837.808983-CDS-L-elsbetiae_contig736:26296..265101691683837.808983-CDS-L-elsbetiae_contig736:26296..26510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 26297..26510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.414749-UTR-L-elsbetiae_contig736:26510..265241622816819.414749-UTR-L-elsbetiae_contig736:26510..26524Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 26511..26524 -
1691683837.8178368-UTR-L-elsbetiae_contig736:26510..265241691683837.8178368-UTR-L-elsbetiae_contig736:26510..26524Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 26511..26524 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig736.16231.1prot_L-elsbetiae_contig736.16231.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig736 21009..26510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig736.16231.1

>prot_L-elsbetiae_contig736.16231.1 ID=prot_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
MTFSWSAPASVLAVLLAAASCPAEGFFVPGSHSFGHSLLQQQQDACAAAS
PRTRAPAPAARGGQLSSLSNAEARPGLPSRRKRRPRQQQHHHHHQQCMYS
QQHKQQRTAGGALASSSTSTGAAAATAAAPGAFAEELGVLDEEQAAMMAE
ECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRA
DSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATR
AAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQ
ADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVF
GWWDHVGDKDKLASFRDSLIHRVGSCADEDEEKADE*
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mRNA from alignment at L-elsbetiae_contig736:21009..26524-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig736.16231.1 ID=mRNA_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5516bp|location=Sequence derived from alignment at L-elsbetiae_contig736:21009..26524- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAACAACAGGCATGACGTTCTCTTGGAGTGCACCTGCTAGCGTTTTG GCCGTACTGTTGGCCGCGGCTTCCTGTCCCGCGGAAGGCTTCTTCGTGCC TGGGTCGCATTCCTTCGGACACTCGCTCCTACAGCAGCAACAGGATGCAT GTGCCGCCGCTTCCCCGAGAACACGAGCTCCTGCACCTGCTGCAAGAGGA GGGCAACTCTCTTCCCTGAGCAATGCGGGTGCGTGGATGTGTTGTGAAGC CTACCCGTCTCTATATGCTGTATGCTCATTTCGCTCTGTGTCCTCTTTGC CTACCTGATGTACTGCTGCTGTGTGTTGCATGAGCTACGAGTGGGATCTT GTCTCTTCGTGTGTCATGCGAGCGCCAGAAGTGGCCACAGCTTATTGAAA TGCACGCCATTTTTTGTCGTTGATGACCTCATCGGGCAAGCCGGAAGCTC TCCTAGGTTCGATGCCGATAGCCAAGAGCACTATTTGTACCCATCGAGGA ACACATTCTTTTCCAGCTGCGTGCTTTTTCCAAGAGACCGAAACCCCTTG CCACCGCTCGTGGGTCCAGAAACGCTCATGGATAATGTATCCTATCATGT AGAAAGTACAATACATAGACCCGACGGGATATCCGCCGTGAGAGATCTGC TGGTCCTACAGGCATAAAGGTGGAATGGCGAGTACTGATTCACCTTACGT GATCTCGAACCGCCAACACCGTTCGGCCGCACTGCTACTACTTACTGTCT GCCTGTTTTTTCTTTTTTTTTATACAACATGCGTTAATACAACAGAAGCA CGGCCAGGGCTTCCCTCGCGGCGGAAGCGTCGGCCACGGCAACAGCAGCA CCACCACCACCACCAGCAGTGCATGTACAGCCAGCAGCACAAACAGCAGC GGACCGCGGGTGGTGCCTTGGCGTCCTCCTCGACGTCAACGGGAGCTGCT GCTGCGACGGCGGCGGCTCCGGGCGCGTTTGCGGAAGAGCTGGGTGTCCT GGACGAGGAACAGGCGGCCATGATGGCGGAGGAGTGCATCCTGGTGGACA GGGACGACCGACCAACGGGCCGCGCCAGCAAGGTGTGGGAAACCGTCTCC GGCTTGCGGCGTTCACCCATCGGTGTTCAGGATTCAATCTTCTGTCTGGA GCTTTGCATGCCTTCGCAACCGCCGTATTGGAGGGACAGACTGCTGTCGC CTACGGGTACAAACTCTTTGCATGCCTTCGCAACCGCCGTCTTGGAGGAA AGACTGCTGTCGTCTACTGGGTACAAACCTTTGCACGCCTTCACAACCGC CGTATTGAAGGAAAGACTGCTGTCGTCATCTGGGTATGTACAACCACACA CACGGACGGACACCTTTCTCGCTGCCTCCTCCTGTTGGTTGAAGGCCTGA TTCTGTTTTTTACGGGGGGGCATAAGGTGTATGGTCATAATTTGTTGGTT CTGGTCGGGGAACTGCTACTGTTCATTGAAGAGAGAACGCAGATACACAT TCTAAATCCACTTACACAAGTGGTGATATTTAGTCGGAAAAACAACTACC TGGTACACATATTTATATGTAAAGTCAAATCCCGCCGCGTTTTTTTTACC ATTTTGTTTTTCAAAAAGAATGTCCAAAAACGCCTTCTCCAAACCGTGTT CTCAAGTTTTGTCGCCGCTCACGCAACCGAACGGAGTCTGATTGTCGGTT ATGGCCGGGGAACTGTTCATTGCAGAGAGATACGCAGATATTTTTACTTC GCCCACAGCTGGGAAAGACCCGAATATGTATGTACATATGTACCTACAAC TTGGTGCTTATCCTAATTGGCTCCGTCTGAATATCCGACTGCGTTTTTTT CTTTTTTTTTCGGGGGGGGGGATTAACCCTTTTAGTATTGTAAGCGCGTT TGGCGATGATTTGGCGACACCCAACTTTGGTCACTGTTTTATGACTTTGG GGTGCACGGGCGGTCTTGGTATCCCGTACAAAGGCCTGGGAGTACCCTGC CGAGTTGTAAGACACTTACCTACCATATCTGGCCTCCTCACAGCTCCACA GCAGTGCTGTGGACACAACGGAGTTGACGTCGATATCTCAAAATCACGAA AAAATCAACGTGTCTGCGATTCCAAACTCTGTGCTTTCCGCGGCGCCCCC AGCGATTTGAGCTTTTGAGCTGACAGCACGCGCACACAGCTTCGCTGTAG CTCTCGAGAACCACCGCATGCTGAGCCTAGAGCGGGTTGCTTCGCTCGCC ACGCTGCATGATGCGTTGTGAGGGCTGCTGCGCGTGCGCAGCCCAGGGTT CATCCCATGTCTCTGAGTCAAAGAAATCTGTATTGTCTGGTACGCCAAAA AAGTTCGACTTGGATTGAGTATTGAAAGTGTCGCCAAACGTTTAACAGAG TTTGACTGCTATTTAGTATAGTAAGTGTCGCCAAATTGATGTGAGGCCCT GCAGCTGGTCTTTGCAGGTGTCTCGCGCAGGGACTGTCCTTCTGGACTAA TCAGCGGGCATCTAGAATAGTTCCATGATTTTGGACCGATAACTTTGGTG CTCAGGGACCTCCCGTACCAAAAGGGTTAAAAGAGTTGATTGGTTTGGTT GGGAGCCGCACCCTGCTGGTACACAGACCCCTCTCCTCCCTTCCTGTGGC TGCGTCTCTCTTGTATTTCTTTCAGCTGGACAAGACAACAAATGCAACCT GTTGCGGCACGATAGTCCCGGTAGAAGATAGGTACGAGGGGAACGAATAT TCGCGAGGCCGACGTTGATTAACTCTGCTGTGTGTGTGTGTGTGTTTGTG CATGTAGGGTGCTTTTTTTCTCCTGTCCTGTTTTTTTCCGGCGCCAACGT TGACACTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT ATTGGTTTTCTTTTTTTTCTTCACATTTATTTCCAGTGCTCGACGGCCTC CTTGCCACGAGGGCATCTTGCCACGAGGGCCATCTTGCCAGAGTACTGAA CCATGGGGTCACACAGAAGGCTTCCGCTCCCCAAGCCCCCCACCCCCACC TTCTGCGATACTTGCCCAAGATTTTTGATCTCGAGAAGGGTTCAGCCGTT CCTTTCCCTTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTTTTCATTG TGTCCGCTCTTTTTTTTCCGGCGAACAGGTGGAGACGCACCTGACCAGCA AAGGGTTGATGCTGCACCGGGCGTTCTCGGTTTTCCTGTTCGACAAGGAA GGGAGGATCTTGATGCAGAGGAGGGCGGACTCGAAGCACACCTTCGCGGG TTTCTGGACCAACACTTGCTGCAGGTGTGCTGTGCTGACCGACTGCGGTG CACTGCTTGCTATATACTTCTATATATGTAGTGTGCATCATGGCGGCCTC GGCCGTGGTGTAGTTTTCTCAGGGGCGGGGCAGGAACATTACACACAATA GGGTATATACATACACCCCGTGGAGGATGTGAATGAAGGCTCCAGTGGGT TAGAAATAGCGTGATAAGTCACAGGCCTCTCCTAGCGATAAGTAGTGGCG CATCGGGCGCAGCAGAGGATGTGTACCCCCTAGCTTGTGTTCGTTGGCGC ACGATTTACGCGCTCTCGTCTGACCGAAGTTGTATTTGCATTGCTCACAT GATGGTGTGCCGTCTGCCAACCCCCCCTCTTTCTTGGACCAGCACGAGCT GCCAGCAGCACCTGCACCATACCGAACATCCTACGGGGCCCCCACCCCCA ACCTACCCCTAACCTTTATACCCCCACCTCGCCCTGCAGCCACCCTCTTT GGAACGACGTCGAGATGGGAACGGACTTGACGACGCCGAAGGGCGACAAG AACGCCAGCGAGGGGGACGCCGCCATCACGGGAGCGACCCGGGCGGCGGT GAGAAAACTGGGGCAGGAGCTGGGCATCTCCGCCGATCAGCTCCCGTTGG AGGACTTCTCCTTCCTCACCAAGGTGTGTGGTGTGTGCTTGTGTGCTTGT GTTTTGTGTTTTTGTGTTTTGTACAAGACAGCACTACAGCACCACCAGGC CCGGGTTGTTTGTTTTCACTCTGTTGTTAGCACCTCTGACTACTGTCAAG GGATTAGACCACTCAGCCATAGGGTAAAAGGTTAACCAACTGCTCGTCTG AGAGTACATCTTATAACACTACACCGTTGCGCTACAGTTGGAGGCTCCGA AAGTCTCATGACTTGGCGCACCTCTGGCCAAATCGTTACGCTACAGTTGA AGGCTCCGAGACTCTAATGACTTGGCACACCTCTGATCGAACCGTTGCGC TACAGTTGGAGGCCCCGAAACTCTCATGACTTGGCCAACCTCTGTACATG CCGGTACGCCGGCGGAGTGAGCATAATTAGCACGTTTCCCCTCGGCACGC GCGTCCTGTGGAGACATGCTGCAAGGATCGGGTTGTAAGCCGGGATAGCG TGTTGAGGACGTTTGAAGCGGGTCGGAATGACAAAAAGCGCCAAATGAAG CGCCAAGTGTCTGCGTTTGTTGTGAAACCGGCTGAGTTGTAGTATGTATG GCAGACCTCAAGCCTCAATTACAGCACTGGAGTAGAAAAAAAAAACGAAG AAAAAAGCCCCAGTGTTCACCCCCTCCTGTGTGACCCCGGTTGATTCTAG TCGTACAGACAAATGCACTGCAAAGTGTAGTACCTCTAAGTACACCGCAA GGTGTAGTACACGTTTCTACTTGGGGGGACTGTCGCCAAAATAAATGGGA AGGACACACACACACACACACACACACAGTAGTGCGTCCAACCCGTTTTT TTCCCGTCAAATTGTGCACCATATTTTCACGTTGTTTCAGCAGCTGTCTC CCCTGCCTTCCACCGCATGTCAGAGTCATAGAGGTAACCCCCCCCCCTTC AACACCACGCTCCCGCTTTCGTGCGATTGAAAAAAATGGCAGGTGCACTA CATTGCAAATTCCGGCTCGACCTGGGGGGAACACGAGATCGACTACGTCT TCTTGATACAGGCGGACGTCGACCTCGACCCCAACCCCAACGAGGTACTT CGTGCTGCGTAGTTGCTCCCGAAATATCGTGCCCTGGGCCAATCGTAGTA CATGCATACGTAAACACGCGTGCAGCGCACCTGTGGAGGGCGGAGTGTTT TGTCCTCGCGTCCTCGTGGCTTGCCTCGAAACGTATACCCAATCCAACCA TCTCCCCTCACTTCCCCCCCCCTCCTGCGTACATATCCCACAACTGCACC CCCGTGCCCCTCGCCGCCGCCCCCCCCAACGAACGCAGGTATCCGACGCG GAGTTCCTAGACAAGGAGGGCTTGCGATCTCTCCTGGCGGAAGCCGAGCG CGGGGAGGTGGAGTTCACCCCGTGGTCGGCGTACATGATCGACAAGTTCG TGTTCGGGTGGTGGGACCACGTGGGGGACAAGGATAAGCTCGCGTCGTTC CGGGACAGCCTGATTCACCGAGTCGGCTCATGCGCGGACGAGGACGAGGA GAAAGCGGACGAGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig736:21009..26524-

>mRNA_L-elsbetiae_contig736.16231.1 ID=mRNA_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig736:21009..26524- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTTCTCTTGGAGTGCACCTGCTAGCGTTTTGGCCGTACTGTTGGC
CGCGGCTTCCTGTCCCGCGGAAGGCTTCTTCGTGCCTGGGTCGCATTCCT
TCGGACACTCGCTCCTACAGCAGCAACAGGATGCATGTGCCGCCGCTTCC
CCGAGAACACGAGCTCCTGCACCTGCTGCAAGAGGAGGGCAACTCTCTTC
CCTGAGCAATGCGGATGACGTTCTCTTGGAGTGCACCTGCTAGCGTTTTG
GCCGTACTGTTGGCCGCGGCTTCCTGTCCCGCGGAAGGCTTCTTCGTGCC
TGGGTCGCATTCCTTCGGACACTCGCTCCTACAGCAGCAACAGGATGCAT
GTGCCGCCGCTTCCCCGAGAACACGAGCTCCTGCACCTGCTGCAAGAGGA
GGGCAACTCTCTTCCCTGAGCAATGCGGAAGCACGGCCAGGGCTTCCCTC
GCGGCGGAAGCGTCGGCCACGGCAACAGCAGCACCACCACCACCACCAGC
AGTGCATGTACAGCCAGCAGCACAAACAGCAGCGGACCGCGGGTGGTGCC
TTGGCGTCCTCCTCGACGTCAACGGGAGCTGCTGCTGCGACGGCGGCGGC
TCCGGGCGCGTTTGCGGAAGAGCTGGGTGTCCTGGACGAGGAACAGGCGG
CCATGATGGCGGAGGAGTGCATCCTGGTGGACAGGGACGACCGACCAACG
GGCCGCGCCAGCAAGAAGCACGGCCAGGGCTTCCCTCGCGGCGGAAGCGT
CGGCCACGGCAACAGCAGCACCACCACCACCACCAGCAGTGCATGTACAG
CCAGCAGCACAAACAGCAGCGGACCGCGGGTGGTGCCTTGGCGTCCTCCT
CGACGTCAACGGGAGCTGCTGCTGCGACGGCGGCGGCTCCGGGCGCGTTT
GCGGAAGAGCTGGGTGTCCTGGACGAGGAACAGGCGGCCATGATGGCGGA
GGAGTGCATCCTGGTGGACAGGGACGACCGACCAACGGGCCGCGCCAGCA
AGGTGGAGACGCACCTGACCAGCAAAGGGTTGATGCTGCACCGGGCGTTC
TCGGTTTTCCTGTTCGACAAGGAAGGGAGGATCTTGATGCAGAGGAGGGC
GGACTCGAAGCACACCTTCGCGGGTTTCTGGACCAACACTTGCTGCAGGT
GGAGACGCACCTGACCAGCAAAGGGTTGATGCTGCACCGGGCGTTCTCGG
TTTTCCTGTTCGACAAGGAAGGGAGGATCTTGATGCAGAGGAGGGCGGAC
TCGAAGCACACCTTCGCGGGTTTCTGGACCAACACTTGCTGCAGCCACCC
TCTTTGGAACGACGTCGAGATGGGAACGGACTTGACGACGCCGAAGGGCG
ACAAGAACGCCAGCGAGGGGGACGCCGCCATCACGGGAGCGACCCGGGCG
GCGGTGAGAAAACTGGGGCAGGAGCTGGGCATCTCCGCCGATCAGCTCCC
GTTGGAGGACTTCTCCTTCCTCACCAAGCCACCCTCTTTGGAACGACGTC
GAGATGGGAACGGACTTGACGACGCCGAAGGGCGACAAGAACGCCAGCGA
GGGGGACGCCGCCATCACGGGAGCGACCCGGGCGGCGGTGAGAAAACTGG
GGCAGGAGCTGGGCATCTCCGCCGATCAGCTCCCGTTGGAGGACTTCTCC
TTCCTCACCAAGGTGCACTACATTGCAAATTCCGGCTCGACCTGGGGGGA
ACACGAGATCGACTACGTCTTCTTGATACAGGCGGACGTCGACCTCGACC
CCAACCCCAACGAGGTGCACTACATTGCAAATTCCGGCTCGACCTGGGGG
GAACACGAGATCGACTACGTCTTCTTGATACAGGCGGACGTCGACCTCGA
CCCCAACCCCAACGAGGTATCCGACGCGGAGTTCCTAGACAAGGAGGGCT
TGCGATCTCTCCTGGCGGAAGCCGAGCGCGGGGAGGTGGAGTTCACCCCG
TGGTCGGCGTACATGATCGACAAGTTCGTGTTCGGGTGGTGGGACCACGT
GGGGGACAAGGATAAGCTCGCGTCGTTCCGGGACAGCCTGATTCACCGAG
TCGGCTCATGCGCGGACGAGGACGAGGAGAAAGCGGACGAGTAGGTATCC
GACGCGGAGTTCCTAGACAAGGAGGGCTTGCGATCTCTCCTGGCGGAAGC
CGAGCGCGGGGAGGTGGAGTTCACCCCGTGGTCGGCGTACATGATCGACA
AGTTCGTGTTCGGGTGGTGGGACCACGTGGGGGACAAGGATAAGCTCGCG
TCGTTCCGGGACAGCCTGATTCACCGAGTCGGCTCATGCGCGGACGAGGA
CGAGGAGAAAGCGGACGAGTAG
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