mRNA_L-elsbetiae_contig7343.16214.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7343.16214.1
Unique NamemRNA_L-elsbetiae_contig7343.16214.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: D7FNR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR3_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 1.100e-126
Identity = 242/458 (52.84%), Postives = 283/458 (61.79%), Query Frame = 1
Query:  184 RSLPPAARA---FWVTLERAGI-ETSDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDA--NGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQ-FCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGAL-----AEGATLTTVGEDGAGETTLLSTAPPAGDER-------------GG---AAVLVGLPVITSPRGLRFWLDLCGVGNNPVVCQEAFEAFGNSPSI-----AQQPEPRKEGGEAGTTTTTDSSLGSFGRESRSAPGSETARAPS-YGQAWFETTMSKLKSLDDGGLRVAGVHVMAPGPGPRRRASELASRGVFGTSR 1455
            R  PP A A   F VTLER+ + +T D  LWKSGVF+AE+HPDLPPA T+A L R YLRRAK AV +   +GN  +S                          ++  G+   +EG E G YLVRTVPVQ+SR+KELRRRLA AAGVD+ GA +   RPA+ALLLVSGSHPGRRLP  +  LPDVYDELRLATSMR+SG LPK LA WAVANP+ EADE GV+RVRKKVELGAEVI+TQPPL WE FERWL+GV A+GAL     A  A LT  GE       +  T+   G+ER             GG   A +LVGLPVITSP+GLRFWLDLCG+ + P VC++ FEAFG   S+     +++P     G +  T                          PS YGQ W ETTM KLKSLD  GL VAGVH+MAPG  PRRRA ELA+ G FG  R
Sbjct:   36 RPTPPVAAARVGFVVTLERSVVTDTEDGALWKSGVFDAEIHPDLPPAGTMAGLARCYLRRAKAAVFEMRPDGNSDSSSEGEKAAGSD----------------TDTVGRCVAKEGNE-GGYLVRTVPVQLSRQKELRRRLAVAAGVDAEGAKVRNVRPADALLLVSGSHPGRRLPFAKSFLPDVYDELRLATSMRNSGRLPKGLALWAVANPLAEADEAGVDRVRKKVELGAEVILTQPPLAWELFERWLQGVHASGALGRSAAARNAGLTKPGEGTDATVKIFETSGSTGEERSTRHPLAAAEGRRGGDPAARILVGLPVITSPKGLRFWLDLCGLHDKPGVCKQVFEAFGQPSSVVARTGSEEPHAHPAGEKQATAVA--------------------GSPPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIELAATGFFGKPR 456          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A6H5L748_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L748_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 5.850e-120
Identity = 227/449 (50.56%), Postives = 276/449 (61.47%), Query Frame = 1
Query:  184 RSLPPAARA---FWVTLERAGI-ETSDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETT-----LLSTAPPAGDER-------------GG---AAVLVGLPVITSPRGLRFWLDLCGVGNNPVVCQEAFEAFGNSPSIAQQPEPRKEGGEAGTTTTTDSSLGSFGRESRSAPGSETARAPSYGQAWFETTMSKLKSLDDGGLRVAGVHVMAPGPGPRRRASELASRGVFGTSR 1455
            R  PP A A   F VTLERA + +T D  LWKSGVF+AE+HPDLPPA T+A L+RYYLRRAK AV +   +R +                           ++  G+        G YLVRTVPVQ+SR+K   R  A A GVD+ GA +   RPA+ALLLVSGSHPGRRLP  +  L DVYDELRLATSMR+SGHLPK LA WAVANP+ E DE G++RVRKKVELGAEVI+TQPPL WE FERWL+GV  +GAL   A     G    GE T     +   +   G+ER             GG   A +LVGLPVIT+P+GLRFWL+LCG+ +NP VC++AFEAFG+  S+  +             T T+   G    E +++  + +  +P YGQ W ETTM KLKSLD  GL VAGVH+MAPG  PRRRA +LA+ G FG  R
Sbjct:   36 RPTPPVAAARVEFVVTLERAVVTDTEDGTLWKSGVFDAEIHPDLPPAGTMAGLVRYYLRRAKAAVFEMRPDRNSDSSSKGEKSTGSD--------------TDTVGRSVARDGIEGGYLVRTVPVQLSRQKA--RDAACADGVDAEGAKVPNVRPADALLLVSGSHPGRRLPFAKSFLMDVYDELRLATSMRNSGHLPKGLALWAVANPLTEVDEAGIDRVRKKVELGAEVILTQPPLAWELFERWLQGVHTSGALGGSAAARNDGLAKPGEGTDATMKMFEASGSTGEERSTRRPTAAAEGQRGGDSTARILVGLPVITAPKGLRFWLNLCGLHDNPGVCKQAFEAFGHPSSVVAR-------------TGTEEPHGHPAGEKQASAVAGSTPSP-YGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIQLAAAGFFGEPR 454          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: E1ZJ72_CHLVA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ72_CHLVA)

HSP 1 Score: 137 bits (346), Expect = 2.290e-32
Identity = 111/317 (35.02%), Postives = 150/317 (47.32%), Query Frame = 1
Query:  217 VTLERAGIETS--DDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGNNPVVCQEAFEAFGNS 1161
            + LERA  E    D +LW S  F AE++PDLP A T  +LLR   R  + A  ++   R                              E   + C    ER  + VRTV  Q+  + +LR  + +AAGVD  G    G RPA+ALL VSGSHP R LP   R L D +D L LA++MR+ G+LP  L+ WAV NPM+      V+R+R+K + GAEV+VTQP L+W+  +RW          A+ A    V  +                      V++GLP++ S   L FWL LC V   P   Q   ++F  S
Sbjct:   38 LCLERAVGEKHGIDQNLWDSCHFQAEIYPDLPLATTWRDLLR---RTVQTAGHESEVGR-----------------------------VEPPPKVCPA--ER--WTVRTVAAQLRSRDQLRSMMLSAAGVDPAGDPKPGVRPADALLFVSGSHPARHLPGAGRWLQDSFDLLLLASAMREEGYLPASLSLWAVENPMLAP----VKRLRQKADAGAEVVVTQPALLWDRVQRW----------ADEADRELVSHN--------------------VKVMLGLPIVPSIGNLDFWLRLCNVRGLPEA-QALLQSFPQS 283          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A8J9WJA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJA9_9CHLO)

HSP 1 Score: 136 bits (343), Expect = 8.040e-32
Identity = 101/299 (33.78%), Postives = 138/299 (46.15%), Query Frame = 1
Query:  217 VTLERAGIET---SDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLC 1104
            +TLER GI      D  LW +G F+  V+PDLP     ++ L +   R    + D    R                             S A G        R   LVRT  VQ+   ++LRRRL   AG++  G +  G RPA+ALLLVSGSHP RR      +L D    L LA S+RD G LP + + WAVANP+V+  +     + +KV  GAEVI+TQPPL++  FE W  GV   G  ++                              A +++G+P++TS R + FWL+LC
Sbjct:   40 LTLER-GIGAHLGKDTKLWGTGSFDVGVYPDLPAVMKWSDFLDFKKLRKTGKLQDLEKLR---------------------------IESAAGG--------REGLLVRTCGVQLRGHEQLRRRLLLRAGLEEDGRSAAGVRPADALLLVSGSHPLRRALAWSGVLQDSVSALHLAHSLRDQGLLPPQTSLWAVANPLVDTPDT----LERKVAAGAEVILTQPPLIYSKFESWFDGVDRLGVASK------------------------------AKIVIGIPMLTSSRSMLFWLELC 268          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A2P6TC01_CHLSO (Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC01_CHLSO)

HSP 1 Score: 137 bits (344), Expect = 5.850e-30
Identity = 110/308 (35.71%), Postives = 143/308 (46.43%), Query Frame = 1
Query:  205 RAFWVTLERAGIETS--DDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGNNP 1122
            RA  +TLERA  E    D +LW S  F A+V+PDLP A T  +LLR  ++ A  A                                        D        ER  + VRTV  Q+  + +LR  + +AAGV   G    G   A+ALL VSGSHP RRLP   R L   +D L LA++MR+ G+LP  L+ WAV NPM+      V+R+++K ++GAEV++TQPPL+WE           T A AE A    V E                       V++GLPV+ S   L FWL LCGV   P
Sbjct:  828 RAPLLTLERAVGEKHGVDGNLWDSCRFGAQVYPDLPLASTWRDLLRRTVQTAGRAA----------------------------------EPGSVDPPPAACPAER--WTVRTVAAQLRSRDQLRSMMLSAAGVGPDGEPRPGAARADALLFVSGSHPARRLPGAGRWLQSSFDLLLLASAMREEGYLPPALSLWAVENPMLSP----VDRLQQKADVGAEVVLTQPPLLWE----------RTAAWAEEAAARRVSEH--------------------IKVVLGLPVVPSVGNLDFWLRLCGVRGQP 1065          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A2P6VAW2_9CHLO (5,10-methylenetetrahydrofolate reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW2_9CHLO)

HSP 1 Score: 131 bits (329), Expect = 1.010e-29
Identity = 109/306 (35.62%), Postives = 145/306 (47.39%), Query Frame = 1
Query:  217 VTLERA-----GIETSDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDAN-GNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGN 1116
            +TLERA     GI   D +LW S  F AE++PDLP A T  +LLR   R  + A  D+  G  G +                               Q C    ER  + VRTV  Q+  + +LR  + +AAGVD++G    G   A+ALL VSGSHP R LP   + L   +D L LA++MR+ G+LP  L+ WAV NPM+      V R+ KK+E GAEVI+TQPPL+W     W           E A    + ++                      V++GLP++ S   L FWL LCGV N
Sbjct:   72 LTLERAVGDKHGI---DQNLWDSCHFRAEIYPDLPLATTWRDLLR---RTVQTAGRDSEAGWVGPA------------------------------AQACPA--ER--WTVRTVAAQLRSRDQLRAMMLSAAGVDASGDPKPGGSSADALLFVSGSHPARHLPGATKWLQSSFDLLLLASAMREEGYLPPSLSLWAVENPMLSP----VSRLDKKIENGAEVIITQPPLLWNRTALWF----------EQADKQRLSQN--------------------VKVVLGLPIVPSVGNLEFWLRLCGVRN 303          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A061R353_9CHLO (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R353_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 2.400e-28
Identity = 78/200 (39.00%), Postives = 105/200 (52.50%), Query Frame = 1
Query:  523 YLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGNNP 1122
            +LVRTV VQ   ++EL   +   A  +  G A +    ANALL VSGSHP R+L +M RLLP   D L +A  M+  G+LP  L  WAV NP++E D    +R+R+K+E GAEV+VTQPPL W+ F+RW       G L +                                ++VGLP+++S   L FWL LCG  + P
Sbjct:   24 WLVRTVGVQCRSRRELGEHILRQAFGNDDGDA-DQIGAANALLCVSGSHPVRQLSIMGRLLPSSLDTLAMAGEMKARGNLPGSLRLWAVENPLLEYD---AQRLRRKIEAGAEVVVTQPPLDWDSFQRWADDADRLGLLEQ------------------------------CQLVVGLPMLSSAGNLAFWLQLCGAHSAP 189          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A1D2A210_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A210_AUXPR)

HSP 1 Score: 123 bits (308), Expect = 5.330e-27
Identity = 108/339 (31.86%), Postives = 142/339 (41.89%), Query Frame = 1
Query:  133 AARGGYGLLSRTRRFRGR----SLP------PAARAFWVTLER-AGIET-SDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVG 1113
            A+R G  L +R+ RF  R    SLP      P  R   +TLER  G E  SD++LW+SG F A V PDLPPA T+ +L    LR     V ++      +                                        G   VR+V  Q+  +++LRRR+A A       A  EG  PA ALLL+SG HP R LP++   L +    LR A + R  G LP     WAVANP      E + R+  KVE GA  ++TQPPL+W     W+      G                                  A +++G+P+ITS   L FWL L G G
Sbjct:   23 ASRVGPRLYTRSARFIRRLASTSLPQDGNAVPLPRPLLLTLERKVGREAGSDEELWRSGAFGAGVVPDLPPATTLRQLAAQALRLPGGHVAESPTTAPPATCRAPAGLTPQQPP--------------------------GCITVRSVAAQLRSREDLRRRMAAAV------AGSEGHPPAQALLLLSGGHPVRTLPIVPHFLGNSLSMLRDAGTARSRGELPADTRLWAVANP----GSETLRRLAAKVEAGASTVLTQPPLLWRRSREWMERAAENGLTHR------------------------------ARIVLGVPLITSRSNLEFWLFLIGAG 295          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A383W723_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W723_TETOB)

HSP 1 Score: 120 bits (301), Expect = 8.930e-26
Identity = 99/297 (33.33%), Postives = 130/297 (43.77%), Query Frame = 1
Query:  250 DDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYL----VRTVPVQISRKKELRRRLATAAGVDSTGAALEGC--RP-ANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGNN 1119
            D DL  +G F AEVHPDLP A T   L +    R +          GT+                            AD   C+E  +         V TV  Q+S   ++   + TAAGV  +G   E    RP A+ALLLVSGSHP R LPL+++ LP     LR A+ ++  G LP++L  WAVANP++E D    E+   KV  GA+VI+TQPPL W  FE W+   R                                     A +LVG P+++S   + FW  LCG G N
Sbjct:   62 DLDLLATGAFGAEVHPDLPIATTWHGLYKQISSRLQ----------GTARRDALAAAAKAQSKAAAVQMM-------ADIASCEEAMDSQGLKPVLHVATVGAQLSSMADISDAMCTAAGVTPSGVRREASEHRPHADALLLVSGSHPVRTLPLLQQFLPGSVAMLRQASQLKQRGVLPQQLQLWAVANPVMEPDASYTEQ---KVAAGAQVILTQPPLDWARFEAWMEDARRRQL------------------------------HSAARLLVGFPLLSSAANVTFWGALCGAGGN 308          
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Match: A0A250WU83_9CHLO (Methylenetetrahydrofolate reductase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WU83_9CHLO)

HSP 1 Score: 118 bits (296), Expect = 7.260e-25
Identity = 109/334 (32.63%), Postives = 142/334 (42.51%), Query Frame = 1
Query:  193 PPAARAFWVTLERA-GIET--SDDDLWKSGVFNAEVHPDLPPAWTIAELLRY---YLRRAKEAVLDANGNRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXSEADGQFCQEGEERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAA-LEGCRPANALLLVSGSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEADEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLTTVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGVGNNPVVCQEAFEAFGNSPSIA 1173
            P  +R F ++LERA G+    SD++L  SG F+AEV PDLP A T   L R    +     E    +N   G S                            A  Q   E     +  V TV V +    E+ RR+  A+   ++    ++    + ALLLVSGSHP R LP + RLLP   D LR A  ++  G +P     WAVANP +E D   +E   KKVE GA  I+TQPP     FE WL  V   G L + A                              +LVG+P I+SP  L FWL L G    P  CQ+    F  + + A
Sbjct:  103 PLRSRHFILSLERAVGLHALGSDEELRASGAFSAEVIPDLPIATTWGALARASASWFTAGSELKQQSNKKDGPSSHQPVL----------------------AVSQLKAELSSVVTSRVNTVAVNLRSMAEVERRMIEASTSSASDQPHIKADSSSAALLLVSGSHPLRTLPGVNRLLPSSVDALRAAKKLKSRGLIPGATQLWAVANPNLERDASLLE---KKVEHGATTILTQPPFDMAAFEAWLTDVERRG-LPDHA----------------------------VNILVGMPFISSPGNLAFWLSLAGCSGRP-ACQQLLAGFQRAAAAA 381          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7343.16214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FNR3_ECTSI1.100e-12652.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L748_9PHAE5.850e-12050.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
E1ZJ72_CHLVA2.290e-3235.02Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A8J9WJA9_9CHLO8.040e-3233.78Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A2P6TC01_CHLSO5.850e-3035.71Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID... [more]
A0A2P6VAW2_9CHLO1.010e-2935.625,10-methylenetetrahydrofolate reductase n=1 Tax=M... [more]
A0A061R353_9CHLO2.400e-2839.00Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A1D2A210_AUXPR5.330e-2731.86Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A383W723_TETOB8.930e-2633.33Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A250WU83_9CHLO7.260e-2532.63Methylenetetrahydrofolate reductase n=1 Tax=Chlamy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7343contigL-elsbetiae_contig7343:4697..8327 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score142.5
Seed ortholog evalue5e-31
Seed eggNOG ortholog554065.XP_005846552.1
Hectar predicted targeting categorysignal peptide
EggNOG OGs2E0ZU@1,2S8CR@2759,34N70@3041,37XFJ@33090
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons6
Model size1813
Cds size1413
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7343.16214.1prot_L-elsbetiae_contig7343.16214.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7343 4757..7987 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.551519-UTR-L-elsbetiae_contig7343:4696..47561622816817.551519-UTR-L-elsbetiae_contig7343:4696..4756Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7343 4697..4756 +
1691683836.2972891-UTR-L-elsbetiae_contig7343:4696..47561691683836.2972891-UTR-L-elsbetiae_contig7343:4696..4756Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7343 4697..4756 +
1622816817.632878-UTR-L-elsbetiae_contig7343:7987..83271622816817.632878-UTR-L-elsbetiae_contig7343:7987..8327Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7343 7988..8327 +
1691683836.3884277-UTR-L-elsbetiae_contig7343:7987..83271691683836.3884277-UTR-L-elsbetiae_contig7343:7987..8327Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7343 7988..8327 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.5657318-CDS-L-elsbetiae_contig7343:4756..49651622816817.5657318-CDS-L-elsbetiae_contig7343:4756..4965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 4757..4965 +
1691683836.3089802-CDS-L-elsbetiae_contig7343:4756..49651691683836.3089802-CDS-L-elsbetiae_contig7343:4756..4965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 4757..4965 +
1622816817.5781777-CDS-L-elsbetiae_contig7343:5278..55731622816817.5781777-CDS-L-elsbetiae_contig7343:5278..5573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 5279..5573 +
1691683836.320728-CDS-L-elsbetiae_contig7343:5278..55731691683836.320728-CDS-L-elsbetiae_contig7343:5278..5573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 5279..5573 +
1622816817.588574-CDS-L-elsbetiae_contig7343:5911..60011622816817.588574-CDS-L-elsbetiae_contig7343:5911..6001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 5912..6001 +
1691683836.3405833-CDS-L-elsbetiae_contig7343:5911..60011691683836.3405833-CDS-L-elsbetiae_contig7343:5911..6001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 5912..6001 +
1622816817.6007965-CDS-L-elsbetiae_contig7343:6262..63601622816817.6007965-CDS-L-elsbetiae_contig7343:6262..6360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 6263..6360 +
1691683836.354994-CDS-L-elsbetiae_contig7343:6262..63601691683836.354994-CDS-L-elsbetiae_contig7343:6262..6360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 6263..6360 +
1622816817.6128228-CDS-L-elsbetiae_contig7343:6742..68951622816817.6128228-CDS-L-elsbetiae_contig7343:6742..6895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 6743..6895 +
1691683836.3649096-CDS-L-elsbetiae_contig7343:6742..68951691683836.3649096-CDS-L-elsbetiae_contig7343:6742..6895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 6743..6895 +
1622816817.6224062-CDS-L-elsbetiae_contig7343:7419..79871622816817.6224062-CDS-L-elsbetiae_contig7343:7419..7987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 7420..7987 +
1691683836.3766375-CDS-L-elsbetiae_contig7343:7419..79871691683836.3766375-CDS-L-elsbetiae_contig7343:7419..7987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7343 7420..7987 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7343.16214.1

>prot_L-elsbetiae_contig7343.16214.1 ID=prot_L-elsbetiae_contig7343.16214.1|Name=mRNA_L-elsbetiae_contig7343.16214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=471bp
MLCCGSRYLFTTVGVLSSSATSAAAARGGYGLLSRTRRFRGRSLPPAARA
FWVTLERAGIETSDDDLWKSGVFNAEVHPDLPPAWTIAELLRYYLRRAKE
AVLDANGNRGTSSSSGNGGGRRGRQAATTTGATTSSSSSEADGQFCQEGE
ERGSYLVRTVPVQISRKKELRRRLATAAGVDSTGAALEGCRPANALLLVS
GSHPGRRLPLMRRLLPDVYDELRLATSMRDSGHLPKRLAFWAVANPMVEA
DEEGVERVRKKVELGAEVIVTQPPLVWEFFERWLRGVRATGALAEGATLT
TVGEDGAGETTLLSTAPPAGDERGGAAVLVGLPVITSPRGLRFWLDLCGV
GNNPVVCQEAFEAFGNSPSIAQQPEPRKEGGEAGTTTTTDSSLGSFGRES
RSAPGSETARAPSYGQAWFETTMSKLKSLDDGGLRVAGVHVMAPGPGPRR
RASELASRGVFGTSRRRGRE*
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mRNA from alignment at L-elsbetiae_contig7343:4697..8327+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7343.16214.1 ID=mRNA_L-elsbetiae_contig7343.16214.1|Name=mRNA_L-elsbetiae_contig7343.16214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3631bp|location=Sequence derived from alignment at L-elsbetiae_contig7343:4697..8327+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGGCAAGGCTCGCACGCACAGCGTGTTTTCCCGTGCTAACCACTCGCC TTGATTTTCAATGCTGTGCTGCGGCTCCAGATACCTCTTTACAACCGTCG GCGTCCTGTCTAGCTCCGCAACCAGTGCTGCCGCCGCTCGGGGCGGTTAC GGTCTGCTGTCGAGGACACGGCGGTTCAGAGGTCGTTCTCTACCCCCAGC AGCACGCGCGTTCTGGGTGACTCTCGAACGCGCGGGCATCGAGACTTCGG ATGATGACCTGTGGAAAAGGTAATTGCGTTGCACGGTCGAGATCGTTTTA CGAGTGAGCAACGACGGCGGTGGCAGATAGTTGTGAACACACACCGACAG CAGTTTTCTGCAGTCTTTGCTGCCGTCCATCTCGTGTTCGCACATTGTAG AGTCGTCCACGTTGCTCCTCTGCTGCAAACGCGAGTTCAGCTCAGCTCTC ATTGTTGCATCGAGATGAACACCGCACGGTGTGCTCGAGAAGCGGACGAT TTCTCATTTTTTGGAGGAATTCCTCATCATGACAAACTTTCTGATGTTCA ACTCGGATGTGCCTCCTGTCACTGCAAACCAGCGGCGTGTTCAACGCCGA AGTCCACCCGGACCTTCCTCCGGCATGGACGATAGCGGAGCTCCTCCGCT ACTACTTGCGAAGAGCGAAAGAAGCCGTGCTCGACGCGAACGGAAATCGC GGCACCAGCAGCAGTAGCGGCAACGGCGGAGGTAGACGTGGACGTCAGGC GGCAACGACTACCGGAGCTACCACATCATCATCATCAAGTGAAGCTGATG GTCAATTTTGCCAAGAGGGAGAGGAACGGGGCAGCTACCTGGTCCGCACC GTCCCCGTGCAGATCTCACGAAAGAAGGTACTTATCGGTTGCGCAATTGT TGAGGTATCCTCCGAGGACGGGTTCGGCACCGAAATGATCCATGAGTACA GCAGCAGGTACAGCAGTAACTTTTAGTCTATGTGACTTCTACATGCGCGC GCTGGCTGCACTTTCTGGAGTACATAGGACGCAACTCGAATAATGACATA GCCTACCCTCACAGGAGGACGGCACGGAACGGAGGCTGAATGAGGCACGA TAATGCTCCTGTAAGGCATATGGACGAAATAGCGACACATGTGCTCGCCT CATTGGTCGCCGCCGACAACATCCGATCGCTGTTTCACGCCCACGTCGTA CTTTTACATATTTAGGAACTTCGACGGCGGCTGGCGACAGCGGCCGGCGT AGATTCCACAGGGGCCGCACTTGAGGGTTGCCGACCCGCCAACGCGCTGC TTTTGGTGAGTGCGACGCGCACAAAGCGCAAGCTGTATGTACATACTTCA AAGTACATACTTTCGGCCAAAGTGGGGGGATAGCAGTGGCTCGATCTGGC TTGAATTAACGTAAACGAGCGTTTAGTTTTTGCAACAAGTACAGGCGAGA GCCATGCTCAGCAGAGATGGTGTGTCCGGTTGCGCCTGCCAGTCGTGTGG AGCATTCTGGGGACTGATTGTGGCGAACAAACGCGTTCGCGATTTGTCGG CGCTGTCTCGTGGAAGGTGTCAGGGAGCCACCCTGGGCGACGCCTTCCAT TGATGAGACGTCTCCTTCCGGATGTTTACGACGAGTTGCGCCTGGCGACG AGCATGCGAGACAGGTGAGCACCCCTCTTCTCTGCCGGGATGCATACCGT ACGTTAATTCTCCGCACAGAGATCGGAACACCTATGCACCGCAGCGCGGC AGTAAACAACACAGTAGTCGTCAAGTACAAGCTGTCGGGCCGTGCTCACA GGACCGGATGTTTATCTGAGCGAAAGCCGTTTCCGTACTGGGTGTGACCA GAGCAACCACCAGAAAGTTCAACGTCGTTCGATATTCGGTATCCATGATC ATTCGGCTATGTATGTATTTTTTGCGATATTTGGGGTTCTATCTCGGCAA GAGGTCTCGGGTACCTTCGCCCCACACCAAGCCGCGCACGGTCTTGACGT TTTCACCATGCCCTCTACCTCCCGTCCCGTCTCCGTGTTGTTGCAGCGGT CATTTGCCGAAGCGGTTGGCCTTCTGGGCAGTGGCGAACCCCATGGTCGA AGCAGACGAGGAGGGCGTGGAACGGGTTCGAAAAAAAGTGGAGCTTGGGG CAGAGGTTATTGTCACACAGCCCCCCCTGGTTTGGGAGTTCTTCGAGCGG TGAGATAATGAAGAGTCGTAGGCGGAATCGGCTACTACTGTGTTGGATTG TAGTGTTTGAGAGTCTCTGCTCTACCGCTCTCCGCGCTGCACCGGCGGGC TGATCAGAAACTAGAATGGAGTCCAAAAGTTGAGCTACTAACTTGCATTG TCCCACCCTTTCTGCTTCGCCACTCGCCGCTCACGCTCGGCGCGTCTCAA TTTTCTCAGAGCACGAGACATCCTGAAAAAAAGCTCAAGCTTAAGTGACC CGCTGACCGTGTATAGGCTGTCGGAGCTTTGGCGCCACCTGTTGTTTCCT TCCAGCTTCCAACCTGTAACGACCATTTTCTCTATCAATCAATCAAACAA TCAGTCGATATGTATCGCTTTCGTTACAACTCGATGGGCTGTTCTCGGGA AAAAACGCCCCACCGGTGGCTTTCACGACACAAAAACAAAAAATCGACCC CGAGTTGCGTGTGCACATAATAAGACAGCAGTCGACTCAATAAAACCAAG CACGTGCTGCGACCTTTCGTCAGATGGCTGCGGGGTGTTCGCGCCACCGG AGCCCTAGCGGAAGGTGCCACGCTGACGACCGTCGGGGAAGATGGCGCAG GGGAAACGACGCTGCTGAGCACGGCTCCTCCGGCAGGAGATGAAAGAGGA GGAGCCGCTGTGCTTGTTGGACTGCCGGTGATCACGTCTCCACGGGGGCT CCGCTTCTGGCTCGACCTGTGCGGAGTGGGCAACAACCCGGTCGTTTGCC AGGAGGCGTTTGAGGCCTTCGGAAACAGCCCGTCGATTGCACAGCAGCCA GAACCGCGGAAGGAAGGAGGGGAAGCGGGTACTACTACTACTACCGACTC GTCTTTGGGCTCTTTTGGGCGGGAGTCACGATCGGCTCCGGGAAGCGAAA CTGCGAGAGCGCCGTCGTACGGACAGGCGTGGTTCGAGACCACGATGTCC AAGCTGAAGAGTCTCGACGACGGGGGGTTGAGAGTGGCGGGAGTGCACGT CATGGCTCCCGGCCCAGGGCCGAGGCGGCGAGCTAGCGAACTTGCCAGCA GGGGTGTTTTTGGGACGTCTCGGCGGAGAGGGCGAGAATGAAAGCCGGTC CGGTCCGGCTGCACCTGATGTGATGGCGGTGCTGCTGTGTCAAATCAAGT CGAAGTTATCGTCTGACATTAGATTTGTGTTTTAGGCCTTGTCAGACGTT CGGCCTCACATGCGCGTTGTGATGCATCGCATTGTGAGGGCATTTATTTG TAAGTTTTGTTTTGTTTTTAAGCACCACGGATCGTGCTGCCACGCAGCAC GACAGGCGGGCGCCGAATTTAGCGACAAGCAAGTTGGGACACCATACACG AAGCTTAAAAGCACACGCCGTTTCGTAACGGCATTCGGATTACCGTATAA CCGAAGGACAGCACACATGGTAAGCTTCCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7343:4697..8327+

>mRNA_L-elsbetiae_contig7343.16214.1 ID=mRNA_L-elsbetiae_contig7343.16214.1|Name=mRNA_L-elsbetiae_contig7343.16214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2826bp|location=Sequence derived from alignment at L-elsbetiae_contig7343:4697..8327+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTGCTGCGGCTCCAGATACCTCTTTACAACCGTCGGCGTCCTGTC
TAGCTCCGCAACCAGTGCTGCCGCCGCTCGGGGCGGTTACGGTCTGCTGT
CGAGGACACGGCGGTTCAGAGGTCGTTCTCTACCCCCAGCAGCACGCGCG
TTCTGGGTGACTCTCGAACGCGCGGGCATCGAGACTTCGGATGATGACCT
GTGGAAAAGATGCTGTGCTGCGGCTCCAGATACCTCTTTACAACCGTCGG
CGTCCTGTCTAGCTCCGCAACCAGTGCTGCCGCCGCTCGGGGCGGTTACG
GTCTGCTGTCGAGGACACGGCGGTTCAGAGGTCGTTCTCTACCCCCAGCA
GCACGCGCGTTCTGGGTGACTCTCGAACGCGCGGGCATCGAGACTTCGGA
TGATGACCTGTGGAAAAGCGGCGTGTTCAACGCCGAAGTCCACCCGGACC
TTCCTCCGGCATGGACGATAGCGGAGCTCCTCCGCTACTACTTGCGAAGA
GCGAAAGAAGCCGTGCTCGACGCGAACGGAAATCGCGGCACCAGCAGCAG
TAGCGGCAACGGCGGAGGTAGACGTGGACGTCAGGCGGCAACGACTACCG
GAGCTACCACATCATCATCATCAAGTGAAGCTGATGGTCAATTTTGCCAA
GAGGGAGAGGAACGGGGCAGCTACCTGGTCCGCACCGTCCCCGTGCAGAT
CTCACGAAAGAAGCGGCGTGTTCAACGCCGAAGTCCACCCGGACCTTCCT
CCGGCATGGACGATAGCGGAGCTCCTCCGCTACTACTTGCGAAGAGCGAA
AGAAGCCGTGCTCGACGCGAACGGAAATCGCGGCACCAGCAGCAGTAGCG
GCAACGGCGGAGGTAGACGTGGACGTCAGGCGGCAACGACTACCGGAGCT
ACCACATCATCATCATCAAGTGAAGCTGATGGTCAATTTTGCCAAGAGGG
AGAGGAACGGGGCAGCTACCTGGTCCGCACCGTCCCCGTGCAGATCTCAC
GAAAGAAGGAACTTCGACGGCGGCTGGCGACAGCGGCCGGCGTAGATTCC
ACAGGGGCCGCACTTGAGGGTTGCCGACCCGCCAACGCGCTGCTTTTGGA
ACTTCGACGGCGGCTGGCGACAGCGGCCGGCGTAGATTCCACAGGGGCCG
CACTTGAGGGTTGCCGACCCGCCAACGCGCTGCTTTTGGTGTCAGGGAGC
CACCCTGGGCGACGCCTTCCATTGATGAGACGTCTCCTTCCGGATGTTTA
CGACGAGTTGCGCCTGGCGACGAGCATGCGAGACAGGTGTCAGGGAGCCA
CCCTGGGCGACGCCTTCCATTGATGAGACGTCTCCTTCCGGATGTTTACG
ACGAGTTGCGCCTGGCGACGAGCATGCGAGACAGCGGTCATTTGCCGAAG
CGGTTGGCCTTCTGGGCAGTGGCGAACCCCATGGTCGAAGCAGACGAGGA
GGGCGTGGAACGGGTTCGAAAAAAAGTGGAGCTTGGGGCAGAGGTTATTG
TCACACAGCCCCCCCTGGTTTGGGAGTTCTTCGAGCGCGGTCATTTGCCG
AAGCGGTTGGCCTTCTGGGCAGTGGCGAACCCCATGGTCGAAGCAGACGA
GGAGGGCGTGGAACGGGTTCGAAAAAAAGTGGAGCTTGGGGCAGAGGTTA
TTGTCACACAGCCCCCCCTGGTTTGGGAGTTCTTCGAGCGATGGCTGCGG
GGTGTTCGCGCCACCGGAGCCCTAGCGGAAGGTGCCACGCTGACGACCGT
CGGGGAAGATGGCGCAGGGGAAACGACGCTGCTGAGCACGGCTCCTCCGG
CAGGAGATGAAAGAGGAGGAGCCGCTGTGCTTGTTGGACTGCCGGTGATC
ACGTCTCCACGGGGGCTCCGCTTCTGGCTCGACCTGTGCGGAGTGGGCAA
CAACCCGGTCGTTTGCCAGGAGGCGTTTGAGGCCTTCGGAAACAGCCCGT
CGATTGCACAGCAGCCAGAACCGCGGAAGGAAGGAGGGGAAGCGGGTACT
ACTACTACTACCGACTCGTCTTTGGGCTCTTTTGGGCGGGAGTCACGATC
GGCTCCGGGAAGCGAAACTGCGAGAGCGCCGTCGTACGGACAGGCGTGGT
TCGAGACCACGATGTCCAAGCTGAAGAGTCTCGACGACGGGGGGTTGAGA
GTGGCGGGAGTGCACGTCATGGCTCCCGGCCCAGGGCCGAGGCGGCGAGC
TAGCGAACTTGCCAGCAGGGGTGTTTTTGGGACGTCTCGGCGGAGAGGGC
GAGAATGAATGGCTGCGGGGTGTTCGCGCCACCGGAGCCCTAGCGGAAGG
TGCCACGCTGACGACCGTCGGGGAAGATGGCGCAGGGGAAACGACGCTGC
TGAGCACGGCTCCTCCGGCAGGAGATGAAAGAGGAGGAGCCGCTGTGCTT
GTTGGACTGCCGGTGATCACGTCTCCACGGGGGCTCCGCTTCTGGCTCGA
CCTGTGCGGAGTGGGCAACAACCCGGTCGTTTGCCAGGAGGCGTTTGAGG
CCTTCGGAAACAGCCCGTCGATTGCACAGCAGCCAGAACCGCGGAAGGAA
GGAGGGGAAGCGGGTACTACTACTACTACCGACTCGTCTTTGGGCTCTTT
TGGGCGGGAGTCACGATCGGCTCCGGGAAGCGAAACTGCGAGAGCGCCGT
CGTACGGACAGGCGTGGTTCGAGACCACGATGTCCAAGCTGAAGAGTCTC
GACGACGGGGGGTTGAGAGTGGCGGGAGTGCACGTCATGGCTCCCGGCCC
AGGGCCGAGGCGGCGAGCTAGCGAACTTGCCAGCAGGGGTGTTTTTGGGA
CGTCTCGGCGGAGAGGGCGAGAATGA
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