mRNA_L-elsbetiae_contig734.16211.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D7FMR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR8_ECTSI) HSP 1 Score: 203 bits (517), Expect = 1.380e-53 Identity = 116/253 (45.85%), Postives = 157/253 (62.06%), Query Frame = 3 Query: 990 LRKIEHYSQLAGDTLESYSGPVTAELSKASTILAYLHGFMGNREKFEEQLEFSNSILAAFVKQASTDTPTMGIAEMIHHRETAEWC--NVDLGEIESFRAPH-GPPQIVGATDERESYTSAIQSFRVFEENVYAKAVRMHDSGRSRSDELCKGEEGTASRPGSLYPPRTRPLAETVSRAMVKEMHEENLIQFERLEEAVDRPTIRKGIGSLIISGTLVFNKAAKGDACGTLERISCCVEVYERYLGLCRCMMR 1739 L + Y + A +L+SY+GP E++KA TIL YL+GFMG+ KFEE L F++S L A + + S DT G AE++H ++T + C N+D ++ESF A H P+I A ++ E Y QSF+VF++ YAKA S R SD+ C+ E G + PL + V AM + +I+F++LEE +RP IR G+G LII+GTLVF +AAKGDA GTLERI CVEV+ERY GLCRC MR Sbjct: 79 LESVASYFRWARVSLDSYTGPANPEVAKAWTILGYLYGFMGDMAKFEEYLGFADSFLTASINEGSADTLPAGFAEIVHRKDTVKVCSDNLDPADMESFCARHRDAPRICEAVNDGELYRYVTQSFKVFQQVAYAKACAKSASRRRLSDDQCRAEGGEG-----VSAKDCGPLEDDVLDAMATGLRG-YVIEFDQLEETANRPRIRAGVGGLIINGTLVFERAAKGDAEGTLERIRHCVEVFERYPGLCRCTMR 325
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 198 bits (504), Expect = 2.210e-49 Identity = 109/203 (53.69%), Postives = 131/203 (64.53%), Query Frame = 2 Query: 212 GMRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRR-HPKQQGQRQQRQQTRPAGVHPTKVLLHSTSGAVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSVRPLSGSPHGSWDRGDRFDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGALVRGSPVESVMIY 817 GMRKSC CGR K+ CDG PC RCL + CTYSKR+ H Q G++ QR+ PAGV + S SG +L GM+P KR +LSASP TGLVGM+EN FLSDFF CVGF+P TS+SHIR AMV++MAR + + G+ H S ++ DT T G + G QL PS CTFWCAV MGAL +GSPVESV Y Sbjct: 17 GMRKSCGACGRKKRKCDGLMPCSRCLRAGVRCTYSKRKPHQPQLGRQHQRRPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDG---------ITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANY 210
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.120e-48 Identity = 111/209 (53.11%), Postives = 136/209 (65.07%), Query Frame = 2 Query: 197 RPSMQGMRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRRHPKQQGQRQQRQQTRPA--GVHPTKVLLHSTSGAVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSVRPLSGSPHGSWDRGDRFDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGALVRGSPVESVMIY 817 RP++ GMR+SC CGR KK CDG+ PCRRC+GS +C Y RR + +QQ Q RP G H +VL + GA++ GM+P KR RLSASP TGLVGM+EN FLSDFF CVGF+PLTS SHIRE MV++MA P+ PL S G T+ +++ S QLPMD STCTFWCA+A+GAL +GSPVESV Y Sbjct: 23 RPTLPGMRRSCTECGRKKKRCDGQQPCRRCVGSGGQCAYIMRRWHLLKPHQQQHQSQRPDRDGAHGREVLQSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPA--PLQQSAIGG--ACSEVGTMVRAP-CWNEASER----NQLPMDASTCTFWCAIALGALAKGSPVESVAKY 222
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.820e-47 Identity = 106/204 (51.96%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 215 MRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRR--HPKQQGQRQQRQQTRP-AGVHPTKVLLHSTSGAVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSVRPLSGSPHGSWDRGDRFDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGALVRGSPVESVMIY 817 MR+SC C R+KK CDG PC RC+G+ +C Y KR+ HP Q Q++QQ R AG T++ HS SGA LA +P KRCRLSASP TGLVGM+EN FLSDFF CVGFLPLT++SH+R AMV++MA + + + H + D+G +F + FS+ + G QL PS CTFWCAV +GALV+G P ESV IY Sbjct: 17 MRRSCCECARHKKKCDGLTPCSRCIGAGVQCIYIKRKSTHP----QYQRKQQLRGLAGTQSTELQRHSLSGAFLARDTLPLKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRSHVRGAMVRMMAHSAAQHQLRARHDTPDQG-QFGAI------FSEDG--ITTGNQLSTGPSACTFWCAVGVGALVKGRPAESVTIY 207
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 189 bits (480), Expect = 2.100e-46 Identity = 260/934 (27.84%), Postives = 340/934 (36.40%), Query Frame = 2 Query: 212 GMRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRRHPKQQGQRQQRQQTR-PAGVHPTKVLLHSTSGAVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSVRPLSGSPH---GSWDRGDR--FDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGALVRGSPVESVMIYFDDLCLPGRRRFDVLRLSCMI*SPILSGTSYLNNPRPPSYVVAPRVNPLAVRAYFLVVAEDRTLLSTGGRYAGKLLGSSYRGVVEGINYPGLSSWFHGEQGEV*GAAGIFQLDSGCFRQASVDGYTDNGDSRDDSSQGDRRVVQRGSRRDRVVSRPARPAAD-----SRSHRR-EGVVYK--CD---PIVPGV*GECLRESGEDA**RALEERRALQGRRRHSIEARKPVPPPDQAPG*DGVEGHGERNARRE-PHPVRAAGRSGRPPHHPERHRQPHHQRNPRLQQGRQRRRLWHPGENILLRRGVRAVPWVVSLHDEVVSDRLVLASPGQAKTKGVCAGCCSWVLALLHVFFR-EGFCRQPAPSTSHAPFFFLSPYAQALQRATVPVALYVCGQRWSLAPVPLF*ETPGDEKGPVIPPVGQVACPHLHLPYLPALQRTHIAHVLLGALAALGGSSAAELHARLRTTYNRYRPFGSLPVPPLEEWRGISSFCQEFHCRTLECFIMREGLEVFSPPPEREATNFCSAGDE-PHDFTE--QQQSSTRLVPEGGT-EGPVPVPVAAPCSGGAGLEAPADARSMDQHPVQGGRPACSTPSAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAPTSRKAVMGPHGKGGPDSFGGRSDEAFVSRGFSEVGGLQCVTGDAGIARPDWLDVTHAMLSAVD 2944 GMR+SC CGR K+ CDG PC RCL S +CTYSKR+ + Q Q Q +++ R PA + T++L HS+SGA+ A GM+P KR RLSASP TGLVGM+EN FLSDFF CVGFLPLT+ SHIR MV++M LS +PH S+D ++ FD + T + G QL PS CTFWCAV +GALV GSPVE V Y G R D L + T +N A A+ YF D T + LG S + + I AG ++ + +V Y N D+ G RR RD + PA D ++SH E +V++ C+ I P E + G P P QA G R+ + H A RS +R+G+ + +++ L L G KG G + + VF R G CR C W H++H +LGALAA+ S A EL+ RLR YN R SLP PPLEEWRG+S+FC +F CR E I + L VFS P + S G + D+ + +Q T +VP G E + APCS G + + ++Q P P S P P R AV G G G + + +V G+ TGD I DWLDVTHAML +D Sbjct: 17 GMRRSCCECGRKKRKCDGMAPCSRCLRSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMT------LSTAPHQLGASYDSPEQCQFDAIL--------TEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNY------SGLAR-DALN----------AYTGPVN---------AEVAKAWAILGYFYGFMGDTTTFQ-------EYLGLSDSFLTDSIERGSTDIL----------PAGFAEI---IRHKQTVKVYAGNLDAAYIDFLGARR-------RDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCG----------------------SPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRSN-------------------------------------IRQGIGGL---------LINMNLALQKAG----KGDAGGALERLRHCVEVFERYPGVCR--------------------------------CMMLWC-----------------------------------------HVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTSIVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPA----PQMSPPVGP-----------------------------------------------------SLSTSHVHCCEPDRGAVEGCGGGGVSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAMLGEID 681
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 184 bits (466), Expect = 2.710e-46 Identity = 105/211 (49.76%), Postives = 135/211 (63.98%), Query Frame = 2 Query: 200 PSMQGMRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRRH--PKQQGQRQQRQQTRPAGVHPTKVLLHSTSG-AVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSV--RPLSGSPHGSWDRGDRFDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGALVRGSPVESVMIY 817 P++ GMR+SC CGR KK CDG PC RC+ + CTYSKRR P+ GQ+ Q + +R H +VLL S+ A+++ +P KR RLSASP GLVGM+E+ FLSDFF CVGFLPLT++S IREAMV++MA P+ RP G G D FD + G + + G Q PM+P +CTFWCA+A+GAL +GSP ESV Y Sbjct: 18 PTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSNCTYSKRRWHLPQPHGQQHQPRPSRRDRTHRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVG---GGCDEEALFDAIARGEDLINASEG-----HQHPMNPRSCTFWCAIALGALAKGSPFESVAKY 220
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.650e-43 Identity = 109/252 (43.25%), Postives = 149/252 (59.13%), Query Frame = 3 Query: 990 LRKIEHYSQLAGDTLESYSGPVTAELSKASTILAYLHGFMGNREKFEEQLEFSNSILAAFVKQASTDTPTMGIAEMIHHRETAEWC--NVDLGEIESFRAPHGPP-QIVGATDERESYTSAIQSFRVFEENVYAKAVRMHDSGRSRSDE-LCKGEEGTASRPGSLYPPRTRPLAETVSRAMVKEMHEENLIQFERLEEAVDRPTIRKGIGSLIISGTLVFNKAAKGDACGTLERISCCVEVYERYLGLCRCM 1733 + ++ +Y QLA D L++Y+GPV AE++KA IL YL+ +MG+ EK+EE L+ S S L ++Q STD G AEM+HH+ETA+ NVD + S A H P QI A E + + QS FE+ V+ K+ + R SD+ LC G A+ G P E VS AMV ++ LI+FE L++ VDRP + GI L+I+ TL + KAA GDA G LER CV+V+ERY G+CRCM Sbjct: 72 IEEVANYLQLARDALDAYTGPVNAEVAKAWAILGYLYSYMGDTEKYEEYLKLSASFLIDSIEQGSTDMLPAGFAEMVHHKETAKAYSGNVDATDNGSLGAHHQHPLQINPAASEGDVFRYVAQSLIAFEQVVFEKSCENSAARRHSSDDKLCDETTGGATPLGHT------PQVEEVSDAMVAGF-KDGLIEFEYLQDTVDRPNVGTGIVGLLINMTLAYQKAANGDAGGALERFGQCVDVFERYPGVCRCM 316
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI) HSP 1 Score: 177 bits (448), Expect = 4.020e-43 Identity = 106/198 (53.54%), Postives = 126/198 (63.64%), Query Frame = 2 Query: 197 RPSMQGMRKSCDRCGRNKKGCDGEWPCRRCLGSRKECTYSKRRHPKQQGQRQQ--RQQTRPAGVHPTKVLLHSTS-GAVLAYGMVPFKRCRLSASPGTGLVGMKENVFLSDFFTCVGFLPLTSQSHIREAMVKVMARPSVRPLSGSPHGSWDRGDRFDTLTSGGGAFSDTSGALGGGKQLPMDPSTCTFWCAVAMGAL 781 RP + G+R+SC CGR KK CDG+ PCRRC+ S +CTYSKRR Q +Q RQ R G H +V LHST GA+ G +P R LSASP TGLVGM+EN FLSDFF CVGFLPLT+QSHIRE MV +M P++R G + G FD++ GG +S SG G QLPM+PSTCTFW MG L Sbjct: 22 RPILPGIRRSCSECGRKKKRCDGQRPCRRCVRSGSQCTYSKRRRRLLQTHKQTHLRQPDRD-GAHGGEVPLHSTPPGALATSGRLPLARFGLSASPATGLVGMQENAFLSDFFGCVGFLPLTTQSHIRETMVNIMVSPAIR--QSFVGGDFGAGGPFDSIA-GGVEWSKASG----GHQLPMNPSTCTFWAWAIMGYL 211
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.740e-40 Identity = 108/256 (42.19%), Postives = 143/256 (55.86%), Query Frame = 3 Query: 984 SLLRKIEHYSQLAGDTL-ESYSGPVTAELSKASTILAYLHGFMGNREKFEEQLEFSNSILAAFVKQASTDTPTMGIAEMIHHRETAEWCNVDLGE--IESFRAPHG--PPQIVGATDERESYTSAIQSFRVFEENVYAKAVRMHDSGRSRSDELCKGEEGTASRPGSLYPPRTRPLAETVSRAMVKEMHEENLIQFERLEEAVDRPTIRKGIGSLIISGTLVFNKAAKGDACGTLERISCCVEVYERYLGLCRCMM 1736 S + + Y++LA L S S P E++KA ILA LHGFMG+ E FE+ L S+S + + +++ STD +G AE++ +E A N GE +E F PPQ+ E E Y QS R FE VY A +R ++C E + RP + P +A +S AM + + I FE LEEAVDRP+IR GIG+L+I+G LVF KAAKGD TLERI C+EV ERY GLCRCM+ Sbjct: 95 SPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKEFA---NASCGEWPLECFSVQENNPPPQLSVVATEAELYQYVAQSCRAFERAVYTTATEQS----ARGGDMCDSE--SHGRPDGVRPSPQDFMAGDLSNAMGVLLENGSCIHFEPLEEAVDRPSIRGGIGALLINGILVFEKAAKGDLRATLERIGRCIEVLERYPGLCRCMI 341
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 168 bits (426), Expect = 7.250e-40 Identity = 104/254 (40.94%), Postives = 145/254 (57.09%), Query Frame = 3 Query: 984 SLLRKIEHYSQLAGDTLESYSGPVTAELSKASTILAYLHGFMGNREKFEEQLEFSNSILAAFVKQASTDTPTMGIAEMIHHRETAEWC--NVDLGEIESFRAPHG-PPQIVGATDERESYTSAIQSFRVFEENVYAKAVRMHDSGRSRSDELCKGEEGTASRPGSLYPPRTRPLAETVSRAMVKEMHEENLIQFERLEEAVDRPTIRKGIGSLIISGTLVFNKAAKGDACGTLERISCCVEVYERYLGLCRCMM 1736 S + + +YS+LA D L++Y+GPV AE++ A IL Y +GFMG+ F+E L ++S L +++ ST+ G AE+I +T + ++D I+ + G PPQ+ A +E + + QS FEE V+ KA R SD+ E+ G P P AE VS AMV + ++ LI FE L+E VDR IRKGIG L+I+ L F KA KGDA G LER+ CVE +ERY G+CRCMM Sbjct: 129 SPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDR-----GGGSPHGAAPQAEDVSDAMVMGL-QDGLIDFEHLQETVDRSNIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMM 376 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig734.16211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig734.16211.1 >prot_L-elsbetiae_contig734.16211.1 ID=prot_L-elsbetiae_contig734.16211.1|Name=mRNA_L-elsbetiae_contig734.16211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp MFTYPALALCILTERAIVTERNYIEPLLALGFEPRRGGRMETSTAAATAAback to top mRNA from alignment at L-elsbetiae_contig734:16047..25790- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig734.16211.1 ID=mRNA_L-elsbetiae_contig734.16211.1|Name=mRNA_L-elsbetiae_contig734.16211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9744bp|location=Sequence derived from alignment at L-elsbetiae_contig734:16047..25790- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig734:16047..25790- >mRNA_L-elsbetiae_contig734.16211.1 ID=mRNA_L-elsbetiae_contig734.16211.1|Name=mRNA_L-elsbetiae_contig734.16211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1722bp|location=Sequence derived from alignment at L-elsbetiae_contig734:16047..25790- (Laminarionema elsbetiae ELsaHSoW15)back to top |