mRNA_L-elsbetiae_contig730.16170.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig730.16170.1
Unique NamemRNA_L-elsbetiae_contig730.16170.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI)

HSP 1 Score: 850 bits (2195), Expect = 2.000e-308
Identity = 435/461 (94.36%), Postives = 449/461 (97.40%), Query Frame = 1
Query:    1 MAMNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLMSKLGKQITTTLQ 1383
            MAMNV +AV FYVDKIV+DPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA+HEPMQHLKAVYFIRPTKENIQTLC EIS+PRF EYHVFFCSICP+ELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPA A  LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDIS+QIQADQIFDFRRQQGP+LLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVR+DLEEVVLS TQDDFFA+NRFSNFGDLGVAVK LMD+YQKAT+LNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACAD+HVLHYRELMEKL+SSRIKAPDKLRLAMLYALRYED GNLRAVKSRLLDSGL PEKVDLLDALLQYSGNA+RG GLFGQDNLMSKLGKQITTTLQ
Sbjct:    1 MAMNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKENIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGNLRAVKSRLLDSGLTPEKVDLLDALLQYSGNAARGPGLFGQDNLMSKLGKQITTTLQ 461          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA)

HSP 1 Score: 580 bits (1496), Expect = 3.240e-202
Identity = 303/462 (65.58%), Postives = 372/462 (80.52%), Query Frame = 1
Query:    7 MNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAAD-EHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGN--LRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLMSKLGKQITTTLQ 1383
            MNV  AV  YVD+IV+D ++ GMK LLLD+ TTQ+V+MVYSQSQ++EKEVYLVE + A  + M HLKA  FI+PT E++  LC E+S PRFSEYHVFF ++   +LLQQLA+AD EHEVVRQV EYYA+F A+NEDFF+AN    ++    +P   A    +RN +A+LS+LL++K+KP+ IRYA SS  AR++A + SSQI AD IFDFRRQ GPLLL+LDR+DDPVTPLLSQWTYQAMVHELLGL DNR VL+GAPGVR++LEEVVLS TQDDFFA+NR++NFGDLG AVK LMD+YQ+ ++LNENI +IEDMQAFLER+PAF+SQSLNVSKHVAVLSELARLVD   LLDVSQ EQELAC+D+   H R L+EK++S RI+  DKLRLAMLYALRYED  N  +R++K +L D G+ P+K  LLDAL+ + G A RG GL+GQ NLMS +GK IT++LQ
Sbjct:    1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTAN----VRRGPSQPSGSAP--FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQ 456          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA)

HSP 1 Score: 536 bits (1381), Expect = 1.010e-184
Identity = 262/462 (56.71%), Postives = 356/462 (77.06%), Query Frame = 1
Query:   10 NVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAM-ANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQ-IFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLMSKLGKQITTTLQAS 1389
            +V  ++ FYVDK+V+DP I GMK LLLD+ TT++V+MVYSQ+QILEKEVYLVE++  NHE M HLKA  +I+PT+ N + L  E+  P+F EYH+FF +I P ++L +L   DEH+++ QVHEYY ++ A+NE+FF     ++L L+ P   ++ A  +  RN + VLSVLL++K+ PS IRY GSS  AR LA DIS  I+ +  +FDFRRQ+GPLLLILDRRDDPVTPLL+QWTYQAMVHELLGLN+NRVVL+G PG+ ++LEEVVLS TQD FFA NR +NFGDLG AVK+L+++YQ+  + NENI+SIEDMQAF+ERYP FRS+S+NVSKHVAV+SEL+RL DV  LLD+S+ EQE++CA++H LH +EL+ ++ + ++K+ DKLRLA+LY LRYE    ++ +K+ L + GL  +++ LLDALL Y+G+A R  GLF   ++M+K+ K  T T+  +
Sbjct:    8 DVIASIRFYVDKVVSDPSIGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGKNHEGMNHLKAALYIQPTEANYELLVRELQAPKFKEYHIFFSNIVPGDMLTRLGRLDEHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRRQEGPLLLILDRRDDPVTPLLTQWTYQAMVHELLGLNNNRVVLRGVPGIAKELEEVVLSPTQDAFFATNRHANFGDLGAAVKSLLEEYQRYAKKNENISSIEDMQAFMERYPDFRSKSINVSKHVAVISELSRLTDVCQLLDISELEQEISCANDHNLHKQELVTRIRNGKVKSADKLRLALLYLLRYESYNEVKEIKNLLAEKGLTGQQLSLLDALLAYAGDAKRAAGLFNSGSIMAKMAKTFTNTVHGA 469          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A7S4D657_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D657_HETAK)

HSP 1 Score: 520 bits (1338), Expect = 8.150e-180
Identity = 272/456 (59.65%), Postives = 342/456 (75.00%), Query Frame = 1
Query:   10 NVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDAN-------HEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVR-RDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLD--SGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLM 1347
            +V  A  FY+DKIV+DPKI GMKVLLLD +TTQVV+ VYSQ+Q+LEKEVYLV+R+D          E + HLKA  F RPT+EN+  L  E++RPR+ EYH+FF ++ P +LLQQLA ADEHEVVRQV EYYA+F AVNED  + N    L L          T LS+N  AVLS+LLALKKKPS IR+   S   R+ A ++++ + AD I DFRRQ+GPLLL+LDRRDDPVTPLL+QWTYQAMVHELLGL+++R VL+GAPGVR RDLEEVVL+  QD+FFAR+R SNFGD+G+AVK L+D +Q+ +++NENI S+EDMQAFLERYPAFR++S  VSKHVAVL EL R V+   L+ +S  EQ+LAC D+H   YR+LM+KL  +R+   DKLRLA LYALR+E  GNL +V+ RL D  +G+ P+K  L+DALL+Y+G A R  GL+G   LM
Sbjct:    3 DVIEATRFYIDKIVSDPKIGGMKVLLLDELTTQVVSTVYSQTQVLEKEVYLVDRLDGGGKGGVKKDERLPHLKAAVFCRPTRENLDLLRQELARPRYLEYHLFFSNVVPQDLLQQLAEADEHEVVRQVQEYYADFVAVNEDLVTLNQRHALTLLQETASVSGETQLSQNVAAVLSLLLALKKKPSQIRFPARSGACRQAAAEVAAALAADGIHDFRRQEGPLLLLLDRRDDPVTPLLAQWTYQAMVHELLGLHNHRAVLRGAPGVRHRDLEEVVLAPAQDEFFARHRTSNFGDVGMAVKGLVDQFQQESKVNENIQSVEDMQAFLERYPAFRARSNQVSKHVAVLGELGRRVEAGGLMALSALEQDLACRDDHAAQYRQLMDKLQDARVAPADKLRLAALYALRHEAQGNLHSVRQRLADPDTGVGPQKAALIDALLRYAGEARRAPGLYGAGGLM 458          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A7S1YX83_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YX83_TRICV)

HSP 1 Score: 494 bits (1273), Expect = 6.180e-169
Identity = 267/489 (54.60%), Postives = 346/489 (70.76%), Query Frame = 1
Query:    4 AMNVATAVSFYVDKIVA-DPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMD-ANHEP--------------------MQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANT---LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNE--NINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQ--DNLMSKLGKQITTTLQ 1383
            AM+   A+  YV+++++ D +  GMKVLLLDA TTQ V+ V+SQS IL +EVYLV R+D +N  P                      HLKAV F+RPT  N   L  E++ PRF+EYH+FF  + PS LL+ LA  DE+EVVRQV E+Y +F  VNED  + NC +TL ++     A       L  RNR  +  +LL+LK+ P+ +RY G S  A+ LA D+S  ++ DQIF FR     LLLILDRRDDPVTPLLSQWTYQAMVHELLGLN+NRVVLKGAP V +DLEEVVLS++QD+FF +NR SNFG+LG AVK+L+DDYQ+ T  ++   ++S+E+MQAF+E++P  +SQS NVSKHVA++ ELARLVDV  L+DVSQFEQELACAD+H  HYRELM+KL S  +K PDKLRL MLYALRYED GN+ AVKS + + G+ PE+++L+D +L+Y+G   RG GL+G+  +N M K  K I T++Q
Sbjct:    5 AMDGVDAIRSYVERVISGDGRCHGMKVLLLDASTTQSVSCVWSQSDILAREVYLVARIDDSNSNPNLSTVDDEGRELSNRTGRDRTSHLKAVCFLRPTDANAGLLVKELTNPRFAEYHLFFSGVVPSGLLRMLAENDENEVVRQVQEFYGDFLPVNEDLLTLNCRNTLAMSAASGTAWERDHAHLYERNRRGLEGMLLSLKRTPTAVRYRGGSPLAKRLAADVSESMRTDQIFHFRGG-AVLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNNNRVVLKGAPNVTKDLEEVVLSASQDEFFRKNRHSNFGELGEAVKSLLDDYQRQTATHDVSKLSSVEEMQAFMEKFPELKSQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHSAHYRELMDKLRSPAVKIPDKLRLGMLYALRYEDNGNVNAVKSAMEEGGVLPEQIELIDQILRYAGRGVRGPGLYGEKAENAMQKFTKSILTSVQ 492          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: F0XW02_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW02_AURAN)

HSP 1 Score: 494 bits (1273), Expect = 2.120e-168
Identity = 264/465 (56.77%), Postives = 341/465 (73.33%), Query Frame = 1
Query:    7 MNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--NHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVR-RDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDT--GNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQD-NLMSKLGKQITTTLQ 1383
            MNV  AV  YVDKIV DP   GMKVLLLD  TT+ VAMVYSQ++IL+++VYLVER+D   NHE M+HLKA  F+RPT  N   L  E+ R +FSEYHVFF ++ P + L+ LA ADE+EVVRQV EYYA+F  VN + FS N   +L+L+     A    + +RN + +LS LL+LK +PS IRYAG+S  A+ +A + +SQI AD IF F R + P        +D   PL SQWTYQAMVHELLGLN NRV LKGAPGV+ +DLEEVVLS+T D F+A N+F+NFGDLG+AVK L+DDYQ+ T++NENI+SIEDMQ+F+ERYPAFRS+SLNV+KHVA++ EL+RLVDVY L+DVSQ EQ++AC D+    +RE++ KL+ + +KAPDKLRLAMLYALRYE         +K  L ++ + P+KV LLDALL Y G  +RG GLF  + +L++K  KQ+ ++L+
Sbjct:    5 MNVMAAVRSYVDKIVGDPNCPGMKVLLLDEWTTKTVAMVYSQTEILDRDVYLVERLDQAQNHEVMKHLKACVFVRPTPANFAVLTQEVRRAKFSEYHVFFSNVVPGDALKALAEADENEVVRQVQEYYADFVPVNAELFSLNQRQSLRLSTELRDAFHQDMFARNVNGLLSALLSLKLQPSVIRYAGASRVAKAVAAECASQIAADGIFHFARLESPRF-----EEDAALPLRSQWTYQAMVHELLGLNSNRVKLKGAPGVKDKDLEEVVLSATDDAFYAENKFANFGDLGMAVKDLLDDYQRQTKMNENISSIEDMQSFMERYPAFRSKSLNVTKHVALIGELSRLVDVYKLMDVSQLEQDVACNDDKSAQWREVLAKLNDAAVKAPDKLRLAMLYALRYESAQASTTDRLKLSLEENRVNPDKVALLDALLAYGGKRARGPGLFDSNKSLLAKFSKQVKSSLE 464          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH)

HSP 1 Score: 492 bits (1267), Expect = 6.550e-168
Identity = 240/434 (55.30%), Postives = 326/434 (75.12%), Query Frame = 1
Query:   73 MKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLMSKLGKQITT 1374
            MKVLLLD  T +VV+MVYSQ+Q+LEKEVYL+E +   HE M HLKA  F++PT+ N   L  E++ P++ EYH+FF ++ P ++L +LA  DE E++ Q+ EYYA++ A+NEDFF     ++L L+       +  +  RN + +LSVLL+LKK PS IRY  SS  AR LA D+ + I+  + FDFRRQ G +L+ILDRRDDP+TPLL+QWTYQAMVHELLGLN+NRV+L+GAPG+ ++LEEVVLS+TQDDFF R+RF+NFGDLGVAVK L+DDYQK T+ NENINSIEDMQ+FLERYP FRS+S+NVSKHVAV+SEL+RL D+  LLD+S+ EQE+AC ++   H ++L+ ++ + ++K  DK+R+++LY LRYE   +LR +K  L + G+    + LLDA+L+Y+G A R  GLF Q  +M+KL K   +
Sbjct:    1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLGVRHESMSHLKAAVFVQPTEANYDLLVRELAEPKYKEYHLFFNNVVPQDMLARLARLDEQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRRQDGVMLMILDRRDDPITPLLTQWTYQAMVHELLGLNNNRVILRGAPGITKELEEVVLSATQDDFFRRHRFANFGDLGVAVKQLLDDYQKLTKKNENINSIEDMQSFLERYPDFRSKSINVSKHVAVISELSRLTDLCQLLDISEVEQEIACNNDRSTHKQDLLGRIRNPKVKMADKVRMSILYILRYESYDDLREIKQALAEKGVQVASLSLLDAVLEYAGEAKRAPGLFSQGGIMAKLTKTFNS 434          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 5.210e-167
Identity = 262/470 (55.74%), Postives = 345/470 (73.40%), Query Frame = 1
Query:    7 MNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--NHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQ------GPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRD--LEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQD-NLMSKLGKQITTTLQ 1383
            MNV  A   YVD+IV+DP   GMKVLLLDA TT+ VA VYSQ++IL+++V+LVER+D    HEPM+HLKA  F+RPT  N   L  E++ PRF EYH++F ++ P   L++LA +D+ EVVRQV E+YA+F  VN+  F+ N    L+L   RP A    LL RN D VLS LLALK +P+TIRY+ +S+ A+ +A ++   + AD IF F+R+       GPLLLILDR DD VTPLLSQWTYQAMVHELLG+N+NRV LKG    R D  L+EVVLS+  D F+A+++ +NFGDLG AVK L+DDYQ+ T+LNENI SI+DMQ+FLERYPAFRS+SLNVSKHVA++SEL+RLV+ + L+DVSQ EQELAC D+     RE++ ++   RI   DKLRLA+LYALRYE TGN+  +K  L +  +AP++V L+DALL+Y G ++R  GLFG D +L++K  KQ+ ++L+
Sbjct:    1 MNVLAATRAYVDRIVSDPNNPGMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELADPRFGEYHLYFANVAPRAQLRELAESDDLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTA---DLLRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTGGPLLLILDRADDCVTPLLSQWTYQAMVHELLGVNNNRVRLKGTASARGDPNLDEVVLSAAADPFYAQHQHANFGDLGTAVKQLLDDYQRQTKLNENIKSIDDMQSFLERYPAFRSKSLNVSKHVALISELSRLVETHSLMDVSQLEQELACHDDGASQRREVLARIGDGRIGGEDKLRLALLYALRYEQTGNVEGLKLALAEHRVAPDRVSLVDALLRYGGRSARTAGLFGGDTSLLAKFSKQVKSSLE 467          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 5.990e-165
Identity = 253/466 (54.29%), Postives = 347/466 (74.46%), Query Frame = 1
Query:    7 MNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDA--NHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALP----RPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFG-QDNLMSKLGKQITTTLQ 1383
            MNV  A   YVD+IV+D    GMKVLLLD  TT+ V+ VYSQ+QILE++V+LVER++   +HE M+HLKA  F+RPT  NI+ LC E++ P+FSEYHVFF ++ P+E+L++LA ADE E VRQV E+YA++ AVNED F+ N   +L+L+            N ++ RN  A+LS LL+LK +PS+IRY  SS  AR +A   S +++ D I+ F+ +   +LLILDR DDPVTPLLSQWTYQAMVHELLGLN+NRV +       + +EEVVLS TQD FFA++R+SNFGDLG AVK L+D+YQ  T +NE I++IEDMQ F++RYPAFRSQSLNVSKHV+++SEL RLVD+  L++VSQ EQ++AC ++    +R ++EKL++ +IKAPDKLR+A+LY LRYED+ NL  +K+ L D+ L PEK+ L+DA+L+Y+G  +RG GLFG   ++++K+   + T+L+
Sbjct:    1 MNVIAATRSYVDRIVSDSNNPGMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAAPKFSEYHVFFANVLPNEMLRRLAEADETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFKNR-NTMLLILDRADDPVTPLLSQWTYQAMVHELLGLNNNRVKIPVHADSNKKVEEVVLSCTQDSFFAKHRYSNFGDLGGAVKQLLDEYQAQTHMNERISTIEDMQQFVQRYPAFRSQSLNVSKHVSLVSELGRLVDICDLMEVSQLEQDIACNEDRTTQWRSVLEKLANPQIKAPDKLRIALLYCLRYEDSVNLDRLKAALDDAHLPPEKIILIDAILKYAGKRARGPGLFGAHKSVLAKMTHSLKTSLE 465          
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Match: A0A7S2N3U2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3U2_9STRA)

HSP 1 Score: 486 bits (1251), Expect = 1.020e-164
Identity = 262/495 (52.93%), Postives = 345/495 (69.70%), Query Frame = 1
Query:    7 MNVATAVSFYVDKIVA-DPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMD----------------------ANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFFCSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAMANT---LLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISSQIQADQIFDFRRQQGP------LLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDYQKATQLNE--NINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRYEDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFG--QDNLMSKLGKQITTTLQ 1383
            M+   A+  YVD++V  D +  GMKVLLLDA TTQ V+ VYSQ++IL +EVYLV R+D                       +H    HLKAV F+RPT+ N   +  E++ PRF+EYH+FF  I PS LL+ +A  D  E+VRQV E+Y +F  VNED  + NC +T+ + +    A A     L  RN + V S+LLAL+++P+ IRY  SS+ A +LA D++  I ADQIF FRR +G       LLL+LDR DDPVTPLLSQWTYQAMVHELLGLN+NRVVL+GAP + RDLEEVVLS+ QD+FF +NR +NFG+LG ++K L+DDYQK T+ +   N+N+IEDMQ F+E++P  RSQS NVSKHVA++ ELARLVDV  L+DVSQFEQELACAD+H  H REL++KLSS  +K PDKLRL +LYALRYE  GN+  +KS +   G+ PE ++ +D +L+Y+G+ SRG GL+G    +L+SK+ K I T++Q
Sbjct:    1 MDGVAAIRSYVDRLVTGDGRCRGMKVLLLDASTTQTVSCVYSQTEILSREVYLVSRIDDGGQNPNIERHDDKGGKPRSEQKDHHQTSHLKAVCFLRPTEINAGLIVKELANPRFAEYHLFFSGIVPSGLLRLIAENDGRELVRQVQEFYGDFLPVNEDCLTLNCRNTVAMTMSAGTAWARDHAHLYQRNLEGVQSMLLALRRQPARIRYQASSALAGQLARDVADSIAADQIFHFRRGKGGDGYGNLLLLVLDRLDDPVTPLLSQWTYQAMVHELLGLNNNRVVLRGAPNIARDLEEVVLSAQQDEFFRKNRHANFGELGESIKKLLDDYQKQTRTHNVSNLNTIEDMQNFMEKFPELRSQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHGAHVRELLDKLSSPSVKIPDKLRLGLLYALRYEKNGNVPMIKSEMEKGGVPPESIEFVDTILKYAGSKSRGPGLYGVGSKDLVSKMTKSILTSVQ 495          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig730.16170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK3_ECTSI2.000e-30894.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSG2_9STRA3.240e-20265.58Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3M2G5_9STRA1.010e-18456.71Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4D657_HETAK8.150e-18059.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1YX83_TRICV6.180e-16954.60Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
F0XW02_AURAN2.120e-16856.77Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482SMX5_9ARCH6.550e-16855.30Sec1 family protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A8J2SE02_9STRA5.210e-16755.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JXK3_9STRA5.990e-16554.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2N3U2_9STRA1.020e-16452.93Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig730contigL-elsbetiae_contig730:6877..12254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score851.7
Seed ortholog evalue1.6e-244
Seed eggNOG ortholog2880.D7FJK3
Preferred nameVPS45
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03495,ko:K12479,ko:K20367
KEGG ReactionR08701
KEGG Pathwayko04138,ko04144,map04138,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000011,GO:0000139,GO:0000149,GO:0000325,GO:0001505,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006873,GO:0006885,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006896,GO:0006897,GO:0006898,GO:0006906,GO:0006907,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007596,GO:0007599,GO:0008021,GO:0008104,GO:0008150,GO:0009611,GO:0009705,GO:0009987,GO:0010008,GO:0010638,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0016482,GO:0017156,GO:0019725,GO:0019898,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030004,GO:0030133,GO:0030641,GO:0031090,GO:0031201,GO:0031224,GO:0031334,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0031984,GO:0032258,GO:0032501,GO:0032588,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034058,GO:0034613,GO:0034622,GO:0035542,GO:0035543,GO:0042060,GO:0042592,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045851,GO:0046903,GO:0046907,GO:0048193,GO:0048210,GO:0048227,GO:0048284,GO:0048308,GO:0048489,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050817,GO:0050878,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055067,GO:0055080,GO:0055082,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098771,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140029
EggNOG free text desc.vesicle docking involved in exocytosis
EggNOG OGsCOG5158@1,KOG1299@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03016,ko03036,ko04131
Ec32 ortholog descriptionSec1-like protein
Ec32 orthologEc-04_006430.1
Exons9
Model size1392
Cds size1392
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.5064244-CDS-L-elsbetiae_contig730:6876..69461622816813.5064244-CDS-L-elsbetiae_contig730:6876..6946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 6877..6946 +
1691683833.243612-CDS-L-elsbetiae_contig730:6876..69461691683833.243612-CDS-L-elsbetiae_contig730:6876..6946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 6877..6946 +
1622816813.5174024-CDS-L-elsbetiae_contig730:7063..73511622816813.5174024-CDS-L-elsbetiae_contig730:7063..7351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 7064..7351 +
1691683833.26332-CDS-L-elsbetiae_contig730:7063..73511691683833.26332-CDS-L-elsbetiae_contig730:7063..7351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 7064..7351 +
1622816813.5295377-CDS-L-elsbetiae_contig730:7498..76981622816813.5295377-CDS-L-elsbetiae_contig730:7498..7698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 7499..7698 +
1691683833.2770696-CDS-L-elsbetiae_contig730:7498..76981691683833.2770696-CDS-L-elsbetiae_contig730:7498..7698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 7499..7698 +
1622816813.5432305-CDS-L-elsbetiae_contig730:10272..103611622816813.5432305-CDS-L-elsbetiae_contig730:10272..10361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10273..10361 +
1691683833.2876427-CDS-L-elsbetiae_contig730:10272..103611691683833.2876427-CDS-L-elsbetiae_contig730:10272..10361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10273..10361 +
1622816813.5554414-CDS-L-elsbetiae_contig730:10518..106721622816813.5554414-CDS-L-elsbetiae_contig730:10518..10672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10519..10672 +
1691683833.2986584-CDS-L-elsbetiae_contig730:10518..106721691683833.2986584-CDS-L-elsbetiae_contig730:10518..10672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10519..10672 +
1622816813.567797-CDS-L-elsbetiae_contig730:10836..110001622816813.567797-CDS-L-elsbetiae_contig730:10836..11000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10837..11000 +
1691683833.309665-CDS-L-elsbetiae_contig730:10836..110001691683833.309665-CDS-L-elsbetiae_contig730:10836..11000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 10837..11000 +
1622816813.5785549-CDS-L-elsbetiae_contig730:11379..115621622816813.5785549-CDS-L-elsbetiae_contig730:11379..11562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 11380..11562 +
1691683833.321027-CDS-L-elsbetiae_contig730:11379..115621691683833.321027-CDS-L-elsbetiae_contig730:11379..11562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 11380..11562 +
1622816813.5911093-CDS-L-elsbetiae_contig730:11843..119951622816813.5911093-CDS-L-elsbetiae_contig730:11843..11995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 11844..11995 +
1691683833.3440888-CDS-L-elsbetiae_contig730:11843..119951691683833.3440888-CDS-L-elsbetiae_contig730:11843..11995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 11844..11995 +
1622816813.6034653-CDS-L-elsbetiae_contig730:12162..122541622816813.6034653-CDS-L-elsbetiae_contig730:12162..12254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 12163..12254 +
1691683833.3541076-CDS-L-elsbetiae_contig730:12162..122541691683833.3541076-CDS-L-elsbetiae_contig730:12162..12254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig730 12163..12254 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig730.16170.1prot_L-elsbetiae_contig730.16170.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig730 6877..12254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig730.16170.1

>prot_L-elsbetiae_contig730.16170.1 ID=prot_L-elsbetiae_contig730.16170.1|Name=mRNA_L-elsbetiae_contig730.16170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MAMNVATAVSFYVDKIVADPKISGMKVLLLDAVTTQVVAMVYSQSQILEK
EVYLVERMDANHEPMQHLKAVYFIRPTKENIQTLCTEISRPRFSEYHVFF
CSICPSELLQQLAAADEHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLA
LPRPPAMANTLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDIS
SQIQADQIFDFRRQQGPLLLILDRRDDPVTPLLSQWTYQAMVHELLGLND
NRVVLKGAPGVRRDLEEVVLSSTQDDFFARNRFSNFGDLGVAVKTLMDDY
QKATQLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVY
HLLDVSQFEQELACADEHVLHYRELMEKLSSSRIKAPDKLRLAMLYALRY
EDTGNLRAVKSRLLDSGLAPEKVDLLDALLQYSGNASRGQGLFGQDNLMS
KLGKQITTTLQAS*
back to top

mRNA from alignment at L-elsbetiae_contig730:6877..12254+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig730.16170.1 ID=mRNA_L-elsbetiae_contig730.16170.1|Name=mRNA_L-elsbetiae_contig730.16170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5378bp|location=Sequence derived from alignment at L-elsbetiae_contig730:6877..12254+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATGAATGTGGCCACGGCCGTGAGCTTCTACGTCGACAAGATCGT CGCTGACCCCAAGATATCAGGTTTGCGCAGCTTTTATAGGAGCTTGAGAT ATCCATTGTTTGGGTGGGAGCTGTTCGGGTTCGTGTTTTGAGAGTTTTCA TTTTTTTGCTTACTTTCGCGCTTTGTTCTTCTGGCAGGCATGAAGGTCCT TCTGCTTGATGCGGTGACAACACAAGTGGTGGCAATGGTGTACTCCCAGT CGCAAATCCTGGAGAAGGAGGTATACCTCGTGGAGAGAATGGACGCAAAT CATGAGCCGATGCAGCATCTCAAGGCCGTTTACTTCATCCGGCCTACGAA GGAGAACATCCAGACTCTGTGCACCGAAATCTCCAGGCCGCGATTCTCGG AATATCACGTGTTCTTCTGCAGCATCTGCCCAAGCGAACTGCTGCAACAG CTTGCAGCCGCCGACGAGCACGAAGGTGGGCATACATCGTGTAGCGCAGA ATTACATCTTCAAATCATTATGCGTCACTTCTGTTAAAGGTATACTACTG GTGCACAACATACGAATTGTTGTGGCGTGGCGGGGGCCAAACCTCATGAA AACCTGTCGGTCGGTCTCGAAGTCGTGCGCCAGGTACACGAGTACTACGC GGAGTTTTGCGCCGTGAACGAGGACTTCTTCTCCGCCAACTGCCCGGATA CTCTTCAGCTTGCGTTGCCCAGGCCGCCTGCGATGGCCAATACGCTTCTC TCGCGCAACAGAGATGCTGTGCTCTCCGTGCTTCTTGCGCTTAAAAAGAA GCCTTCTACGATCAGATACGCGGTGAGAAGCCGGAACGACGATCACTCCG GCACTTGCGGCACCCTACAATATACATAGCGCAGCACAGTGGTTCTCGGA GTGTGCCCTTGAGAAGAAAAACGCGAGAAATGCCATCCATTCCCTCTCAA CTCTGAACGAAGTTCATGTGTCGCCCCCGAAGGCCTACTCTTCGGGCTGC GCAGACATCCTCTTCTCGAAAAGTGGTGGGACGATCCACTGTTGGTCTTT GCAACCCCCGGTCCATTCCACGGAGACAGTGCGTGGTAGCGTGAAGGGTG GGTGCTGTGTCCCTCAAGTGAGAATCCGAGATCCAGCTCTGTTGTTTTTA TGAGGTTTTAAAAATAAACAAAGAATCAAAGATGGAACCTAACCCACACT AGAGGAAAGACTTGACATGGGGTTCAAACGGTATTCCAAACAGAGACGTA ATATTTGGCGAAGCGAGCAGAAAAAAATTAAATAGTAGTATTTCACTGCT GTTCAACTTGTACTCCTGGGCTTGAACCCTGTCTCACTATGCTGATCCTA CATAGAGTGACATTAGTGCCCAATGAAGCTCTTCGTTGCTGGAAGACACC TTTTTAGAGTAGACGAGATTAACGTTTGGGAGCTCTCAACATGCATGACG TCTACAGCTGGAGAGAGAGGGCGACAGAACTGTTGTGCTTTCTGCTCACG CCGTTGGGATCATCGATTGTATCTACTATTATGAGCCGCACACCAACCAC AGCACCGGCTCAATATCTTGTAGTAGTCTGGCCCACCCACCACCACCCGT GGACCCACGGCCCCAACACCACCCAACCTACCCAGTAGTGATGACGTGGA GTGCCACGACATGCGGTCACTTAGTTTCAGTTGATACCACACCGTTGTGG CTCGAGCTCCATTCTCTGCGTTCTGGCGAGAAAATCAATTCCTGCCAGCG CACAACTGCCTGCTGGTGTGTGTTGAGCTATGTGCTAAAAGTGCTATCAC CTGACTCCTTGTCTCTCTGTCTCTCTTGGGCGCACACACCCAGACACACC CACCGATTTTGACTGTCTTCCCTTAGTGAAAAAAAGGTTATTCCGAATAG TCAACCATTGTGAAGTTAATTCGTCGAGGAGAGGTGCACCAAAGAGCTCC GAACAAAGAGCGCGAGTAGAGCTGTCGATACATCTGCTCAGTTTCGCCAG GAAAGACTAATGAGAAGCAGGCACATGAAAGTTTGTTTGTCTCTCTCTGT CTCTTTTGTCACGCACATCACGCGCGAACGTTCGAATTAAATATTTCCGC CGTTGTGCCATCAGCACTACATCTAGCACCGTATCCCTGCATGATCAGTA AACCCATGCCGACCTTCCCCCGCCAGTGTGGTCTCGCTCTTCCGTCATCC TAGCGTGGGTGCTGTGTGCTACCCCACATGTACATCTCTGCCTCAGTTTC GGCGAGACTGTCAATAAATGATCTCCGGTTGGTTCCCTTCGTCGTGTGAA ACCCCGGGGTTCCTTCTGACATGGCCCAGGGTCTCCGATCGAAATCTCGA CAAGCACTCGTGTATCACGGCCAACTCTTGTCGGAGCACAACTATACCGA CGTGACAACCAGTTGCCTATTTTTTTTTCCCTTCAGAAGGCAACAGATCG CCAGTCGGTGCTCTATGGACCTGATTCTGATCAGAAAGGAGGGTCATTTC GGTCGCCCGGTTAATCAAGTTTGAGGGCGCTACACGCGGTCGGAGGAACT TTGGCCGATATATACAATATAGAGCTTTTCTTTTCCCTCCTGGGGGATGA AGGGTAAAAAAGGTTGCGGCTTCGCCGCTCCGCAGCTCATTACAACATAC GTAGCATGCGTCGCGTCTGGTACTACGTAAGTTAGCAGACAGAGCGAGTC CACTACCAACCTACGGCGATCGTTGCCCTGCGCCTTCTTCCGTCTTCCCG TTTATTTTTAGTAAGTGTGCTGCAATTCTATGTTAAGGGTTGGTGGTTAA GTCTTAGAGTGGTGCGCTTTTGTTTGTTTCAGGGTTGGGGAGGAGTCGCA TCCGTGTCTCCGTATACGCTCTCTTCATGCGCAATTTGAAAGTAATTTTA TGCCAGGTAGATAAATGATGTCCTTTTCTTTTTTGAGATCCGCGCTTTGG CGTTAAGACTATGTGCTTTTGGTGAAGACGAACAGCAAAGTGTAAACTTG CAGGGTACTATAAAACTGTAATGGTCTCTGAGTTCCCCCGGGGGTATTAA TATTTTTGAAAGCCGGTTTTCTTCGCAAAGGGTGGGTTGCTCTTGCCGAG CAAAGGGCCCTTGGAAGGATCTCGCCGAGATCTTCTCAATTTTGAACGCT TTTGTTATTCGTACCCTCTCGGTTGTGGAGAAAATGGCTTTGAAAAAATA TCTGTACATCCCCGGAGGATCTCAGAGACGATTCTGTATGTAGCGCAGCG ACAACGTTGATCATACTCGAGAGGGAAGGTAGCGCCCATAACTTAAGGAG TATGGTCGACGGAAAGGGAAGGTGGTTCCCAGCTCCCACTTTTGACCTGT ACTTTGTCGCCCCCCGCTTGTTTTCATGTTGGATTATTCTCCACAGGGTT CATCTTCGACCGCCCGCGAGCTAGCCATGGATATTTCGTCTCAGATCCAG GCAGACCAAATCTTCGATTTTCGACGACAGCAAGGGTGAGACGGTTTGTC GTGGAAGTTGTGGGATGTTCACTGCTGTAGAATCGGGTGGGCGCTATATG TGGCACTGGAAGAGCCAAGAGGGGTAGGTGTGTGTTTCACTGAGCTGCTG TTCCCTCTTCATGGTCGGCGTGTGCAATGTTTTGTCGAACAGACCCCTCT TGCTGATCTTGGATCGGCGTGATGATCCTGTGACGCCTTTGCTTTCGCAA TGGACATACCAAGCGATGGTGCACGAGCTCTTGGGACTCAACGACAACCG AGTGGTTCTTAAGGGGGCACCGGGGGTGCGAAGAGATCTAGAGGAGGTGA GCTTCGGCCTCCTCACCGACGCTGTTGTAAGATGTGTTGAAATGTCACCT AGAAATCAGCGAGTGATGCTCCCCAACTCCTCGCTGGCCGGTTCTCGAAT TGCGACGCTGTCCTCTTGTCCCGTACCTACTTGTCTGTGTTTCTTTTTGC GCATGCACAGGTGGTGCTTTCTAGCACACAGGACGATTTTTTCGCGCGCA ACCGATTCTCCAACTTCGGAGATCTAGGGGTGGCCGTTAAAACCCTGATG GACGATTACCAGAAGGCGACCCAGCTGAACGAAAACATCAACAGCATTGA AGACATGCAGGCGTTTCTAGAGCGGTATGTGTCACGAACCTATGCTGTCT TACTTGCGTATGTAGAGTACATCCATCTGGTTCAAACGGTAAAAAAACGA ATGTTTTGAGATCTCTTTTTCAGTCTGACGAAAAAAACCTGCGCCTATCC ACGCAATGCCCCAGGAAAAGCACGAGTAAGCGCTGGGGTTGCTGTTATAG TTACGGCCTTGGCGTTATGTGGCTCTAGTTTGACAGGTACCAAGCCTCAT ACTCAACAATAATAAACGCCCGCGCTCAATGTTGCTCCCGCAAAAGCCTT GGACACGCGTTGTCACCCATCTGGTCTTGCTTGACTCTACGACCAACTGA TGACCCTCCGCAACCCTCTGTACAAATATGATGCATCGCCACGATGCACG CAGGTATCCGGCTTTCCGATCGCAATCTCTCAACGTGTCCAAGCACGTTG CTGTATTGAGCGAACTAGCTCGTCTTGTTGACGTCTACCACTTGCTGGAC GTCAGCCAGTTTGAGCAAGAGCTGGCCTGCGCGGACGAGCACGTGTTGCA CTACCGTGAACTCATGGAGAAACTCAGCAGCTCAAGGTGTCAACAAGTGG ATTGAAGTTGCTGTGGATGCGCATGGGTTTAGAGCCCCGCCCAACAAATG GCTTGAAAATCACCGTGGTGACTCGTGCGGCCCATGGAGCGTTGCATTTT TTTGTTGTCTTGGGGTTCCTTTTTTTGCGAAGGAAGACTTGAAGGAAAAT AATGGCCCTCTTTTTCGTTTTTCTCTAGTCTAAAATATTGTATTTATGTC ATTTTTTTGTACAACAAATCGCATGATGGCTTGGTTCGATGTACACTGTT CTGCTGTGTGCTCGCAGGATTAAGGCGCCGGACAAACTTCGTCTGGCAAT GCTATACGCCTTGCGTTACGAGGACACGGGCAATCTTCGCGCGGTGAAAT CACGTCTTCTTGATTCCGGACTTGCTCCCGAGAAGGTGGACCTACTGGAC GCTCTCTTGCAATACTCAGGTGTGTCTTTTTTTCGCGCCACTAGCATTTC CGTGTGCTCCCCCTTATCTAATCATTATTGTGGTTGACAGCTGCGTCCAA GCATGAGAAGGCTGGCGGCCGCTGCGGGTGCGTCTCAACTGAAAGCGGGA GCTAACGGTGCGGGACTGCCTGTTTTTCGGGTGCAGGAAATGCCTCAAGG GGACAGGGTCTTTTCGGCCAAGACAACCTGATGTCCAAGCTGGGCAAGCA AATCACTACTACGCTCCAGGCAAGTTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig730:6877..12254+

>mRNA_L-elsbetiae_contig730.16170.1 ID=mRNA_L-elsbetiae_contig730.16170.1|Name=mRNA_L-elsbetiae_contig730.16170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2784bp|location=Sequence derived from alignment at L-elsbetiae_contig730:6877..12254+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATGAATGTGGCCACGGCCGTGAGCTTCTACGTCGACAAGATCGT
CGCTGACCCCAAGATATCAGATGGCGATGAATGTGGCCACGGCCGTGAGC
TTCTACGTCGACAAGATCGTCGCTGACCCCAAGATATCAGGCATGAAGGT
CCTTCTGCTTGATGCGGTGACAACACAAGTGGTGGCAATGGTGTACTCCC
AGTCGCAAATCCTGGAGAAGGAGGTATACCTCGTGGAGAGAATGGACGCA
AATCATGAGCCGATGCAGCATCTCAAGGCCGTTTACTTCATCCGGCCTAC
GAAGGAGAACATCCAGACTCTGTGCACCGAAATCTCCAGGCCGCGATTCT
CGGAATATCACGTGTTCTTCTGCAGCATCTGCCCAAGCGAACTGCTGCAA
CAGCTTGCAGCCGCCGACGAGCACGAAGGCATGAAGGTCCTTCTGCTTGA
TGCGGTGACAACACAAGTGGTGGCAATGGTGTACTCCCAGTCGCAAATCC
TGGAGAAGGAGGTATACCTCGTGGAGAGAATGGACGCAAATCATGAGCCG
ATGCAGCATCTCAAGGCCGTTTACTTCATCCGGCCTACGAAGGAGAACAT
CCAGACTCTGTGCACCGAAATCTCCAGGCCGCGATTCTCGGAATATCACG
TGTTCTTCTGCAGCATCTGCCCAAGCGAACTGCTGCAACAGCTTGCAGCC
GCCGACGAGCACGAAGTCGTGCGCCAGGTACACGAGTACTACGCGGAGTT
TTGCGCCGTGAACGAGGACTTCTTCTCCGCCAACTGCCCGGATACTCTTC
AGCTTGCGTTGCCCAGGCCGCCTGCGATGGCCAATACGCTTCTCTCGCGC
AACAGAGATGCTGTGCTCTCCGTGCTTCTTGCGCTTAAAAAGAAGCCTTC
TACGATCAGATACGCGTCGTGCGCCAGGTACACGAGTACTACGCGGAGTT
TTGCGCCGTGAACGAGGACTTCTTCTCCGCCAACTGCCCGGATACTCTTC
AGCTTGCGTTGCCCAGGCCGCCTGCGATGGCCAATACGCTTCTCTCGCGC
AACAGAGATGCTGTGCTCTCCGTGCTTCTTGCGCTTAAAAAGAAGCCTTC
TACGATCAGATACGCGGGTTCATCTTCGACCGCCCGCGAGCTAGCCATGG
ATATTTCGTCTCAGATCCAGGCAGACCAAATCTTCGATTTTCGACGACAG
CAAGGGGTTCATCTTCGACCGCCCGCGAGCTAGCCATGGATATTTCGTCT
CAGATCCAGGCAGACCAAATCTTCGATTTTCGACGACAGCAAGGACCCCT
CTTGCTGATCTTGGATCGGCGTGATGATCCTGTGACGCCTTTGCTTTCGC
AATGGACATACCAAGCGATGGTGCACGAGCTCTTGGGACTCAACGACAAC
CGAGTGGTTCTTAAGGGGGCACCGGGGGTGCGAAGAGATCTAGAGGAGAC
CCCTCTTGCTGATCTTGGATCGGCGTGATGATCCTGTGACGCCTTTGCTT
TCGCAATGGACATACCAAGCGATGGTGCACGAGCTCTTGGGACTCAACGA
CAACCGAGTGGTTCTTAAGGGGGCACCGGGGGTGCGAAGAGATCTAGAGG
AGGTGGTGCTTTCTAGCACACAGGACGATTTTTTCGCGCGCAACCGATTC
TCCAACTTCGGAGATCTAGGGGTGGCCGTTAAAACCCTGATGGACGATTA
CCAGAAGGCGACCCAGCTGAACGAAAACATCAACAGCATTGAAGACATGC
AGGCGTTTCTAGAGCGGTGGTGCTTTCTAGCACACAGGACGATTTTTTCG
CGCGCAACCGATTCTCCAACTTCGGAGATCTAGGGGTGGCCGTTAAAACC
CTGATGGACGATTACCAGAAGGCGACCCAGCTGAACGAAAACATCAACAG
CATTGAAGACATGCAGGCGTTTCTAGAGCGGTATCCGGCTTTCCGATCGC
AATCTCTCAACGTGTCCAAGCACGTTGCTGTATTGAGCGAACTAGCTCGT
CTTGTTGACGTCTACCACTTGCTGGACGTCAGCCAGTTTGAGCAAGAGCT
GGCCTGCGCGGACGAGCACGTGTTGCACTACCGTGAACTCATGGAGAAAC
TCAGCAGCTCAAGGTATCCGGCTTTCCGATCGCAATCTCTCAACGTGTCC
AAGCACGTTGCTGTATTGAGCGAACTAGCTCGTCTTGTTGACGTCTACCA
CTTGCTGGACGTCAGCCAGTTTGAGCAAGAGCTGGCCTGCGCGGACGAGC
ACGTGTTGCACTACCGTGAACTCATGGAGAAACTCAGCAGCTCAAGGATT
AAGGCGCCGGACAAACTTCGTCTGGCAATGCTATACGCCTTGCGTTACGA
GGACACGGGCAATCTTCGCGCGGTGAAATCACGTCTTCTTGATTCCGGAC
TTGCTCCCGAGAAGGTGGACCTACTGGACGCTCTCTTGCAATACTCAGGA
TTAAGGCGCCGGACAAACTTCGTCTGGCAATGCTATACGCCTTGCGTTAC
GAGGACACGGGCAATCTTCGCGCGGTGAAATCACGTCTTCTTGATTCCGG
ACTTGCTCCCGAGAAGGTGGACCTACTGGACGCTCTCTTGCAATACTCAG
GAAATGCCTCAAGGGGACAGGGTCTTTTCGGCCAAGACAACCTGATGTCC
AAGCTGGGCAAGCAAATCACTACTACGCTCCAGGCAAGTTGAGAAATGCC
TCAAGGGGACAGGGTCTTTTCGGCCAAGACAACCTGATGTCCAAGCTGGG
CAAGCAAATCACTACTACGCTCCAGGCAAGTTGA
back to top