mRNA_L-elsbetiae_contig7297.16165.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: D7FPH4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH4_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.990e-31 Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = 2 Query: 2 LRARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGFQGHRMK 178 LRARMDAARGGLGFWPGVRHA ELASVM YLH+DA+PGMC+LHRDLKPDNLGF+G+ MK Sbjct: 38 LRARMDAARGGLGFWPGVRHAVELASVMAYLHDDAMPGMCILHRDLKPDNLGFRGNVMK 96
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A6H5JJZ2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ2_9PHAE) HSP 1 Score: 114 bits (286), Expect = 7.230e-29 Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = 2 Query: 2 LRARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGFQGHRMK 178 LRARMDAARGGLGFWPGVRHA ELASVM YLH+DA+PGMC+LHRDLKPDNLGF+G+ MK Sbjct: 177 LRARMDAARGGLGFWPGVRHAVELASVMAYLHDDAMPGMCILHRDLKPDNLGFRGNVMK 235
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A6H5KVG2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG2_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.370e-12 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 2 Query: 2 LRARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 LR R+D GGLG P V++ +LAS ++Y+H+ +PG+ ++HRDLKPDN+GF Sbjct: 231 LRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGF 283
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: D7FJD0_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD0_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 1.760e-12 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 2 Query: 2 LRARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 LR R+D GGLG P V++ +LAS ++Y+H+ +PG+ ++HRDLKPDN+GF Sbjct: 287 LRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGF 339
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 7.320e-8 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 2 Query: 53 VRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 +R+A +AS M Y H DA+PG VLHRDLKPDN+GF Sbjct: 316 LRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGF 351
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.520e-7 Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 2 Query: 62 ATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 A +A M YLH+DAIPG VLHRDLKPDN+GF Sbjct: 495 ARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGF 527
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 1.200e-6 Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 2 Query: 5 RARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 R R R L + + HA LA + Y H A+PG VLHRD+KPDN+GF Sbjct: 148 RRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGF 199
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE) HSP 1 Score: 53.1 bits (126), Expect = 1.230e-6 Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 2 Query: 53 VRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 +R +LA + Y+HN+A+PG V+HRDLKPDN+GF Sbjct: 395 LRQGLQLAEALQYMHNEAMPGKLVVHRDLKPDNIGF 430
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 1.670e-6 Identity = 18/37 (48.65%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 53 VRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGFQ 163 +++A ++A + Y+H++A+PG V+HRDLKPDN+GF+ Sbjct: 309 LKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFK 345
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Match: A0A7S3DWF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWF4_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.800e-6 Identity = 26/52 (50.00%), Postives = 29/52 (55.77%), Query Frame = 2 Query: 5 RARMDAARGGLGFWPGVRHATELASVMNYLHNDAIPGMCVLHRDLKPDNLGF 160 R R R F +R A +A M YLH AI G VLHRDLKPDN+GF Sbjct: 6 RRRRFWKRKQFSFVDVLRIARSIAEAMTYLHESAIMGSIVLHRDLKPDNIGF 57 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7297.16165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7297.16165.1 >prot_L-elsbetiae_contig7297.16165.1 ID=prot_L-elsbetiae_contig7297.16165.1|Name=mRNA_L-elsbetiae_contig7297.16165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp SEGEDGRGEGRAGFLAGGPARDGAGVGDELPAQRRHPGDVRLAPRPEAGQback to top mRNA from alignment at L-elsbetiae_contig7297:184..363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7297.16165.1 ID=mRNA_L-elsbetiae_contig7297.16165.1|Name=mRNA_L-elsbetiae_contig7297.16165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=180bp|location=Sequence derived from alignment at L-elsbetiae_contig7297:184..363+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7297:184..363+ >mRNA_L-elsbetiae_contig7297.16165.1 ID=mRNA_L-elsbetiae_contig7297.16165.1|Name=mRNA_L-elsbetiae_contig7297.16165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=360bp|location=Sequence derived from alignment at L-elsbetiae_contig7297:184..363+ (Laminarionema elsbetiae ELsaHSoW15)back to top |