mRNA_L-elsbetiae_contig7294.16163.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: D8LQV8_ECTSI (Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV8_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.810e-30 Identity = 64/105 (60.95%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 216 RKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 ++VDMESNGKRVAQDGSVLPF S G PADF GYC SQCPVLLE +PV NH+E MSNFFAQPD+LAY +TAEELE EG PEW Sbjct: 355 QQVDMESNGKRVAQDGSVLPFDAGEIGFGEPGTNGQHSFYQLIHQGGVFPADFGGYCTSQCPVLLEGDPVPNHEEFMSNFFAQPDVLAYAKTAEELEKEGVPEWF 459
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A6U2AQ63_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2AQ63_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.020e-24 Identity = 58/115 (50.43%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 186 QHLRLLGLGGRKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 Q LR L ++VDMESNGKRV DG LP+ S +PADF+G+C+SQ P+ LE E V+NHDELMSNFFAQPD LAYG+T +L AEG PE L Sbjct: 166 QALRRLPAHIQQVDMESNGKRVGTDGFALPYPSGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQTPIQLEGESVSNHDELMSNFFAQPDALAYGKTLNDLAAEGVPEEL 280
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A7S0C7V0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7V0_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.630e-24 Identity = 60/115 (52.17%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 186 QHLRLLGLGGRKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 Q L+ L ++VDMESNGKRVA DG+ +PF+ S +PADFVG+C+SQ PV LE EPV NHDELMSNFFAQPD LAYG+T + AEG PE L Sbjct: 235 QALKRLPAHIQQVDMESNGKRVAIDGTPVPFQTGEINFGEPGTNGQHSFYQLMHQGRVVPADFVGFCESQSPVELEGEPVTNHDELMSNFFAQPDALAYGKTLADCVAEGIPEEL 349
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A662WKH9_9STRA (Glucose-6-phosphate isomerase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH9_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.440e-23 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 566 SVKNRKVFTGNRPSLSPFFSKLDGFSCGQLLAVYEHRTVVQGIVWGLNSFDQWGVELGKKLASE 757 +++N K+F GNRPS+S F KLD FSCGQLLA+YEHRTVVQG +WGLNSFDQWGVELGK LA + Sbjct: 460 ALRNHKMFPGNRPSISLLFQKLDAFSCGQLLALYEHRTVVQGSIWGLNSFDQWGVELGKVLAKQ 523
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A7S3VD10_9STRA (Glucose-6-phosphate isomerase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD10_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.180e-22 Identity = 56/115 (48.70%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 186 QHLRLLGLGGRKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 Q L+ L ++VDMESNGKRV +G+ LPF+ S +PADF+G+ +SQ P+ LE EPV+NHDELMSNFFAQPD LAYG+T ++E EG PE L Sbjct: 420 QALKRLPAHIQQVDMESNGKRVDIEGNPLPFQAGEINFGEPGTNGQHSFYQLMHQGRVVPADFIGFMESQAPISLEGEPVSNHDELMSNFFAQPDALAYGKTLNDVEQEGVPEEL 534
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A0P1B0P7_PLAHL (Glucose-6-phosphate isomerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0P7_PLAHL) HSP 1 Score: 107 bits (266), Expect = 1.300e-22 Identity = 55/105 (52.38%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 216 RKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 ++VDMESNGKRV +G LPF+ S +P DF+G+C+SQ PV LE EPV+NHDELMSNFFAQPD LA G+T E+L+AEG PE L Sbjct: 356 QQVDMESNGKRVTMEGGDLPFEAGEVNFGEPGTNGQHSFYQLIHQGRVVPCDFLGFCESQNPVQLENEPVSNHDELMSNFFAQPDALACGKTIEDLKAEGVPENL 460
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: K3WLR2_GLOUD (Glucose-6-phosphate isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLR2_GLOUD) HSP 1 Score: 106 bits (264), Expect = 1.560e-22 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2 Query: 569 VKNRKVFTGNRPSLSPFFSKLDGFSCGQLLAVYEHRTVVQGIVWGLNSFDQWGVELGKKLASE 757 ++N K+F GNRPS+S F KLD FSCGQLLA+YEHRTVVQG +WG+NSFDQWGVELGK LA + Sbjct: 465 LRNHKLFPGNRPSISLLFPKLDAFSCGQLLALYEHRTVVQGAIWGVNSFDQWGVELGKVLAKQ 527
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A6V2PJ91_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PJ91_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.850e-22 Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 186 QHLRLLGLGGRKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 Q LR L +++DMESNGKRVA DG+ LPF S +PADF+G+C+SQ PV L+ E V+NHDELMSNFFAQPD LAYG+T +L EG PE L Sbjct: 441 QALRRLPAHIQQLDMESNGKRVAMDGTPLPFYAGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQRPVELDGEQVSNHDELMSNFFAQPDALAYGKTFNDLIQEGVPEEL 555
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A7S1Q6B3_ALECA (Glucose-6-phosphate isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q6B3_ALECA) HSP 1 Score: 100 bits (248), Expect = 3.120e-22 Identity = 57/118 (48.31%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 216 RKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGE-------------IPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 +++DMESNGKRV DG+V P T + ++ PGT +PA+F+G+ SQ PV L EPVANHDELMSNFFAQPD LA G+TA+EL+AEG PE L Sbjct: 1 QQLDMESNGKRVQMDGTVCP-------------TTTGAIYFGEPGTNGQHSFYQLMHQGRVVPAEFIGFSASQNPVELPGEPVANHDELMSNFFAQPDALALGKTADELKAEGVPEKL 105
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Match: A0A067CVQ8_SAPPC (Glucose-6-phosphate isomerase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVQ8_SAPPC) HSP 1 Score: 105 bits (261), Expect = 3.860e-22 Identity = 56/105 (53.33%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 216 RKVDMESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVGYCQSQCPVLLE*EPVANHDELMSNFFAQPDILAYGRTAEELEAEGAPEWL 530 ++VDMESNGKRVA DGSVLPF S +P DF+ +C+SQ P L E V+NHDELMSNFFAQPD LA G+T EEL AEG PE L Sbjct: 356 QQVDMESNGKRVALDGSVLPFAAGEINFGEPGTNGQHSFYQLIHQGRVVPCDFIAFCKSQNPTHLSGEKVSNHDELMSNFFAQPDALANGKTVEELAAEGVPEAL 460 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7294.16163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7294.16163.1 >prot_L-elsbetiae_contig7294.16163.1 ID=prot_L-elsbetiae_contig7294.16163.1|Name=mRNA_L-elsbetiae_contig7294.16163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=63bp MESNGKRVAQDGSVLPFKGWRYRLLGLAPTASTSLSAYPPGTGEIPADFVback to top mRNA from alignment at L-elsbetiae_contig7294:6641..9888- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7294.16163.1 ID=mRNA_L-elsbetiae_contig7294.16163.1|Name=mRNA_L-elsbetiae_contig7294.16163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3248bp|location=Sequence derived from alignment at L-elsbetiae_contig7294:6641..9888- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7294:6641..9888- >mRNA_L-elsbetiae_contig7294.16163.1 ID=mRNA_L-elsbetiae_contig7294.16163.1|Name=mRNA_L-elsbetiae_contig7294.16163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=378bp|location=Sequence derived from alignment at L-elsbetiae_contig7294:6641..9888- (Laminarionema elsbetiae ELsaHSoW15)back to top |