mRNA_L-elsbetiae_contig729.16157.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Match: A0A6H5L5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y8_9PHAE) HSP 1 Score: 1161 bits (3003), Expect = 0.000e+0 Identity = 589/842 (69.95%), Postives = 659/842 (78.27%), Query Frame = 2
Query: 8 SSIFRPRLLQRHTCPGERDWLDLPPGIDIDVHVVARGNTDNLRNTLTSLAQACYPEDAQLALHVWALTAHAQEVLTAQDGFLWTHGTFQFHTLTTEHGEVPPLEGWARMWADPSDNEVRLVLAEGLELSNLFYFWLSGTLDRYLGDTTTMEEREIFRENVFGISLSSTGLSEVSGKPLSWEAYEAADGRHPIFHTLPGARGTAFFGWQWRDFSAFMDARARVLESDSWEVRGESLLHVPGGEAMHSWAGSLERFLAEFSHGRGLGILHPNLNGAVSFARQVPSSGTGWEEEE-----------EMLPQTQTEGASTPTPTLRGMEEGE--REPETLIRTYKDANILVGKYPAVSSVPAYDLLFRRHPDLTHLRLLAYRFFQRLGASATRNKELESLWRRPGITKPIYRDAKYLVYQPQFGMGNQLRALEAALAVARVLRRMLVVPDYMADNGEGMPIRYDAIWEFGFLEELVGRNNVILQADFDALLQDGEAIEPPTKVYLADMPIKQLTGSNHYFGGIGWGELPQVPLPLANATEAGWAELQQMEDQVLAVSALFGMFQGWNEDSVGGDTHWHTMVKLHVSEEATWVHDFVDDSLERFRRKATEVAA--ERAKPVGQGEDGVETSRGGVDLAATQFMCAHVRRQDFKASCARYQEEYRSGSARDWVKEALGSGGVCWVEEGHFHDTVSVLLRRAPEQLGVVPSFVFATSDDALFLEEITLGNAVPVFTLDDVS-----------LPKYVTGRGVGTGLAETSASAAGQTITPEEIKAALPAIDVAVCSRGALLMLNYFSTYSALIKAKAKAQPNFVRGLYWMDPPALSNWWTMCLGWFRRK 2455
SSIF+P QR +C E DW +LP G+DID+HVVARGNT NLR TLTSLA+ACYPEDA+LALHVWALTAHA+EV+ AQDGF+WTHGT+QFHTLTT+HGEVPPLEGWARMW DP D EVRLVL EGLELSNLFYFWL+ TL RYLG TMEEREIFRENVFG+SLS+TGLSEVSG P SW AYEAAD + P+FHTLPGARGTAFFGW+ GE+L+HVPGGE SWAGSLERFLAEF HGRGLGILHPNLNG VSFARQ+P E LP +QT A TPTPTLRG ++G REPE L+ TY+DAN L+ KYP+VSSVPAYDLL RRH D+THLRL AYRFFQRL S RNK+LE LW+RPG+ KP Y AK+L+YQPQFGMGNQLRAL+AALAVARVL R+LVVPDY+ADNGEG +RYDAIWEFGFLEELVGR+NVILQADFD LLQD + + PPTKVYLADMPIKQL G++ YFG +GWGELP+VPLPLANATEAGW+ELQQMEDQVLA+SA+FGMFQGW DS GDTHWH MVKLHVSEEA+WVH+FVDDSLERFR KATE AA E+A G+G D + GG + AA +FMCAHVRRQDF+ SC+ Y+EEYR+GSARDWVKEAL GGVCWVEE F DTV VLLR AP +L V P FVFATSDDA FLE+I +GNAVPVFTLDDVS G G ++A+A G+ +TPEE++AALPAIDVAVCSRG LLMLNYFSTYSALIK KAKAQPNF RGLYW DPPALS W+ GWF RK
Sbjct: 82 SSIFKPSHRQRESCRDEIDWPELPHGVDIDLHVVARGNTHNLRTTLTSLAEACYPEDAELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSNLFYFWLASTLARYLGAGVTMEEREIFRENVFGLSLSATGLSEVSGVPSSWGAYEAADKKRPVFHTLPGARGTAFFGWK----------------------EGEALVHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXEALPLSQT--AHTPTPTLRGTDDGGGGREPEGLVLTYRDANNLIVKYPSVSSVPAYDLLSRRHRDVTHLRLQAYRFFQRLRTSVERNKDLEDLWKRPGMPKPNYALAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYIADNGEGRSVRYDAIWEFGFLEELVGRSNVILQADFDDLLQDCDVVLPPTKVYLADMPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAISAMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKATEAAAAAEQADSGGEGGDEELSDVGGRNPAAAEFMCAHVRRQDFEESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEQDFRDTVDVLLRWAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRVAAAXXXXXXXXXXXAGEGFRGPAESSAATAGGKAVTPEEVQAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCGWFLRK 899
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Match: D8LE24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE24_ECTSI) HSP 1 Score: 896 bits (2315), Expect = 5.920e-315 Identity = 500/871 (57.41%), Postives = 556/871 (63.83%), Query Frame = 2
Query: 158 QACYPEDAQLALHVWALTAHAQEVLTAQDGFLWTHGTFQFHTLTTEHGEVPPLEGWARMWADPSDNEVRLVLAEGLELSNLFYFWLSGTLDRYLGDTTTMEEREIFRENVFGISLSSTGLSEVSGKPLSWEAYEAADGRHPIFHTLPGARGTAFFGWQ------------------------------------WRDFSAFMDARARVLESDSWEVRGESLLHVPGGEAMHSWAGSLERFLAEFSHGRGLGILHPNLNGAVSFARQVPSSGTGWEEEEE--------------MLPQTQTEGASTPTPTLRGMEE---GEREPETLIRTYKDANILVGKYPAVSSVPAYDLLFRRHPDLTHLRLLAYRFFQRLGASATRNKELESLWRRPGITKPIYRDAKYLVYQPQFGMGNQLRALEAALAVARVLRRMLVVPDYMADNGEGMPIRYDAIWEFGFLEELVGRNNVILQADFDALLQDGEAIEPPTKVYLADMPIKQLTGSNHYFGGIGWGELPQVPLPLANATEAGWAELQQMEDQVLAVSALFGMFQGWNED----------------------------------SVGGDTHWHTMVKLHVSEEATWVHDFVDDSLERFRRKATEVAA--ERAKPVGQGEDGVETSRGGVDLAATQFMCAHVRRQDFKASCARYQEEYRSGSARDWVKEALGSGGVCWVEEGHFHDTVSVLLRRAPEQLGVVPSFVFATSDDALFLEEITLGNAVPVFTLDDVSLPKYVTGRGVGTGLAETSASAAGQ----------------TITPEEIKAALPAIDVAVCSRGALLMLNYFSTYSALIKAKAKAQPNFVRGLYWMDPPALSNWWTMCLGWFRRK 2455
+ACYPE A+LALHVWALTAHA+EV+ AQDGF+WTHGT+QFHTLTT+HGEVPPLEGWARMW DP D EVRLVL EGLELS+LFYFWLS TL RYLG TMEEREIFR+NVFG+SLS+TGLSEVSGKP SW AYEAAD + P+FHTLPGARGTAFFGW+ W DFSAFMDARARVLESDSWE GE+L HVPGGE SWAGSLERFLAEF HGRGLGILHPNLNG VSFARQ+P +L QT A TPTPTLRG + G REPE L+ TY+DAN LV + P +L P L AS R + Q G+ + R EA L ++ G P+RYDAIWEFGFLEELVGRNNVILQADF LLQD + + PPTKVYLADMPIKQL G++ YFG +GWGELP+VPLPLANATEAGW+ELQQMEDQVLAVSA+FGMFQ S GDTHWH MVKLHVSEEA+WVH+FVD SLERFR KATE AA E+A P G+G D + GG + AA +FMCAHVRRQDFK SC+ Y+EEYR+GSARDWVKEAL GGVCWVEE +F DTV VLLRRAP +L V P FVFATSDDA FLE++ +GNAVPVFTL+DVS G G A +TPEE++AALPAIDVAVCSRG LLMLNYFSTYSALIK KAKAQPNF RGLYW DPPALS W+ WF RK
Sbjct: 84 EACYPEGAELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSSLFYFWLSSTLARYLGAEVTMEEREIFRDNVFGLSLSATGLSEVSGKPSSWGAYEAADKKRPVFHTLPGARGTAFFGWKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGDFSAFMDARARVLESDSWEG-GEALAHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXXXTPLLSQT----AHTPTPTLRGTADDGGGGREPEGLVLTYRDANNLVTSGLDAPAAPGVPIL----PTL---------------ASVGREE------------------------QGPRGLVEKARGAEAELRARQI---------------PGRPVRYDAIWEFGFLEELVGRNNVILQADFYDLLQDCDVVRPPTKVYLADMPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVGDTHWHAMVKLHVSEEASWVHEFVDGSLERFREKATEAAAAAEQADPGGEGGDEELSDAGGRNPAAAEFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHNFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDVKVGNAVPVFTLEDVSRAAAAARGGGEEGAAAXXGXXXXXXXXXXXXXXXXXXXXXAVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTGWSRFCDWFLRK 891
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Match: A0A7S4DJ42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ42_HETAK) HSP 1 Score: 136 bits (342), Expect = 6.910e-31 Identity = 116/399 (29.07%), Postives = 181/399 (45.36%), Query Frame = 2
Query: 1202 YLVYQPQFGMGNQLRALEAALAVARVLRRMLVVPDYMADNGEGMPIRYDAIWEFGFLEELVGRNNVILQADFDALLQDGEAIE---PPTKVYLADMPIKQLTGSNHYFGGIGWGELPQVPLPLANATEAGW-AELQQMEDQVLAVSALFGMFQGWNEDSVGGDTHWHTMVKLHVSEEATWVHDFVDDSLER-FRRKATEVAAERAKPVGQGEDGVETSRGGVDLAATQFMCAHVRRQDFKASCARYQEEYRSGSARDWVKEALGSGGVCWVEEGHFHDTVSVLL--RRAPEQLGVVPSFVFA---TSDDALFLEEITLGNAVPVFTLDDVSLPKYVTGRGVGTGLAETSASAAGQTITPEEIKAALPAIDVAVCSRGALLMLNYFSTYSALIKAKAKAQ 2368
YLVYQP G+ NQ+ +L AA+ +A +L R+LVVP + +NG+G PI + A F L I A A++ E + P ++Y + + + + YF +GWG++P +P + A W QVLA+S+LF + H W D V+ R +R A V + VGQ + ++ G+ C HVRR DF+ C ++E S +AR ++ + + +C+V++ H T+ + R+ QL S VF +DD F ++ + +FTL D+ LP G G+ +TS G+ P+ LP +D +C+R LL+LN FSTYS IK A+ Q
Sbjct: 21 YLVYQPFGGLSNQMMSLHAAMELAFLLDRVLVVPHILTENGQGPPIPWSATQNFDAL---------IAAAPAGAIMNMDEFLTLNLRPERIYEISISARHVEQNLKYFTQLGWGDVPVERMPDVTFSPAAWHRRAGACGAQVLALSSLFNAYS-------------------HAERRKLWRADAVEKEWSRGLQRAARAVHPGIDRAVGQAFESLKEKANGI---LNHIACMHVRRGDFEGYCQDLKKEANSKNARPAMRRLIKTSNLCFVQKQHVFRTLDKVQWPRQEGGQLLNGSSEVFPIYMATDDLKFAKDPDFSRSYSIFTLIDL-LPSAKNG-----GIQKTS----GKDYIPDIW---LPIVDQHICARARLLVLNAFSTYSDSIKLIAETQ 375
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Match: A0A4P9YSI8_ROZAC (Uncharacterized protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YSI8_ROZAC) HSP 1 Score: 104 bits (260), Expect = 2.550e-19 Identity = 154/740 (20.81%), Postives = 280/740 (37.84%), Query Frame = 2
Query: 128 NLRNTLTSLAQACY---PEDAQLALHVWALTAHAQEVLTAQDGFLWTHGTFQFHTLTTEHGEVPPLEGWARMWADPSDNEVRLVLAEGLELSNLFYFWLSGTLDRYLGDTTTMEEREIFREN------VFGISLSSTGLSEVSGKPLSWEAYEAADGRHPIFHTLPGARGTAFFGWQWRDFSAFMDARARVLESDSWEVRGESLLHVPGGEAMHSWAGSLERFLAEFSHGRGLGILHPNLNGAVSFARQVPSSGTGWEEEEEMLPQTQTEGASTPTPTLRGMEE-------GEREPETLIRTYKDANILVGKYPAVSSVPAYDLLFRRHPDLTHLRLLAYRFFQRLGASATRNKELESLWRRPGITKPIYR-----------------------------DAKYLVYQPQFGMGNQLRALEAALAVARVLRRMLVVPDYMADNGEGMPI---------RYDAIWEFGFLEELVG------RNNVILQADFDALLQDGEAIEPPTKVYLADMPIK-QLTGSNHYFGGIGWGELPQVPLPLANATEAGWAELQ-QMEDQVLAVSALFGMFQGWNEDSVGGDTHWHTMVKLHVSEEATWVHDFVDDSLERFRRKATEVAAERAKPVGQGEDGVETSRGGVDLAATQFMCAHVRRQDFKASCARYQEEYRS--GSARDWVKEALGSGGVCWVEEGHFHDTVSVLLRRAPEQLGVVPSFVFATSDDALFLEEITLGNAVPVFTLD 2155
+L+ LTSL A Y D Q+ + A +EV+ D F W HG + T G + W+ SD+E + L + +E+S ++ ++ ++RY +FREN + GISL + +E+ PL W + +P + G +F WR+F + D R + + R + P + ++W S +R L + S+ RG +++PN +SF+ G + + T ++GA+ T + ++ E ++ +++ K N L + + +D+ R+ P + HL F LGA LE L+ TK +++ D KY+++QPQ G NQLRA E A+A A +L+R LV+P + N + + F + +E V R ++L+ + L + +E + D P+K ++ GSN Y E L +D +L+ + LF F + D+ + R+ + V+ G+ + ++ + F+C H RR DF+ C+ E + G + W++ S C+ ++ +S+ +++ ++ G V S +T+ F + L + VF D
Sbjct: 97 SLQRLLTSLTNALYFGVKVDIQINVDGDA----GEEVIALVDSFKWPHGDTIRNIRTDRLGLEKMIMS---AWSPASDDEYAIFLEDDIEVSKYYFGFILMNINRY-----------VFRENADVLSKMMGISLYTPRWNEIVHPPLKWIPSDIVQNSTLFMFQIPCSWGAVYFPKVWREFKEYYDWRTSEVAVRKFGSR----IIAPNAHS-NTWRRSWKRHLIDLSYARGWFMIYPNFPDQLSFSTNHREPGK-LSKAIQKGEHTGSKGAAGKTSSFTLTKKKLWVYTVSLHEDDSFLKSRKFWNDL---NKPIKDLDVFDIYHRKVPSVVHL------FETGLGA-------LEQLYHTNRNTKELFKRFYGINTVDGNNHCVLDLFGSLEREEPVSDEKYIIFQPQLGFNNQLRAYEDAIAYAHILKRTLVLPPVQSTNQSWFSLNSLFDINEDKLSQYINFTYFDEFVDLQLPPPRRMIVLEGLTNFLEPNNVLLEK----HGLDSPVKYRIQGSNRY--------------------EKDIKRLYGSCDDDILSFNTLFMGFYKF-------------------------------DTRTKNRQHSKAVS------------GLWNLKHSLNFGKSPFICIHARRGDFENYCSHLAERIKKEPGLLKTWLRGF--SIDKCYPS----NNVISLRIQKEIQKFGPVKSIYVSTNKPEEFSQSY-LNTTLNVFNSD 722
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Match: A0A7S3WST7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WST7_9SPIT) HSP 1 Score: 67.8 bits (164), Expect = 8.310e-9 Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2
Query: 1859 AATQFMCAHVRRQDFKASCARYQEEYRSGSARDWVKEALGSGGVCWVEEGHFHDTVSVLLRRAPEQLGVVPSFVFATSDDALFLEEITLGNAVPVFTLDDVSLPKYVTGRGVGTGLAETSASAAGQTITP--EEIKAALPAI-DVAVCSRGALLMLNYFSTYSALIKA 2353
++ + C HVRR DF SC Y+EE RSG AR WV G CW + + ++ A G V +F ++ + +F +L +++ K + + + + ++ G I+ E K+AL AI D VCSR + L+LN FST+S ++ A
Sbjct: 12 SSVRLACVHVRRGDFHESCMHYEEEARSGRARQWVVSHFERGFSCWQTDAELELNLQLVRANAAAN-GNVLAFYGSSDEPKVFTSA----------SLHQINVSKL---QRWASRIQQLESTVGGVIISSQGEVQKSALGAIIDQLVCSRASYLLLNIFSTFSQMVIA 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig729.16157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig729.16157.1 >prot_L-elsbetiae_contig729.16157.1 ID=prot_L-elsbetiae_contig729.16157.1|Name=mRNA_L-elsbetiae_contig729.16157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=712bp MWADPSDNEVRLVLAEGLELSNLFYFWLSGTLDRYLGDTTTMEEREIFREback to top mRNA from alignment at L-elsbetiae_contig729:1721..18237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig729.16157.1 ID=mRNA_L-elsbetiae_contig729.16157.1|Name=mRNA_L-elsbetiae_contig729.16157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=16517bp|location=Sequence derived from alignment at L-elsbetiae_contig729:1721..18237+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig729:1721..18237+ >mRNA_L-elsbetiae_contig729.16157.1 ID=mRNA_L-elsbetiae_contig729.16157.1|Name=mRNA_L-elsbetiae_contig729.16157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4272bp|location=Sequence derived from alignment at L-elsbetiae_contig729:1721..18237+ (Laminarionema elsbetiae ELsaHSoW15)back to top |