mRNA_L-elsbetiae_contig7284.16154.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A6H5L2L5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2L5_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 5.870e-133 Identity = 194/200 (97.00%), Postives = 198/200 (99.00%), Query Frame = 1 Query: 292 ERPKVPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQSVVTDRSKM 891 +RPKVPLLP TLSKAL+AGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVE CKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQ+VVTDR+KM Sbjct: 111 KRPKVPLLPTTLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVEKCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSAGSEPANGPRVMSGTVQTVVTDRAKM 310
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A836CMQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ9_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.280e-84 Identity = 138/198 (69.70%), Postives = 159/198 (80.30%), Query Frame = 1 Query: 286 KRERPKVPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA-----AAKKSAGSEPANGPRVMSGTVQ 864 +R R K + KAL+AG+FVLGIGTGVTVDSAINT+P+DLASRDAIDRNAPNP ICQTYGSSAMVVD+RVFVTFNPFS++V+QAD KPGCVLR SN V+VL+R R L+ + +VETCKGGMNTW +VGDLN PQLSCVYQSDDAQNEF+S+PK GLGEDVYDDDRAA AA+ A S GP+ V+ Sbjct: 100 ERRRDKGFFNSVKIPKALLAGIFVLGIGTGVTVDSAINTNPKDLASRDAIDRNAPNPGICQTYGSSAMVVDERVFVTFNPFSIYVAQADVKPGCVLRQSNFVQVLKR-RNLINDAEVETCKGGMNTWAFVGDLNGKPQLSCVYQSDDAQNEFVSDPKIGLGEDVYDDDRAAEQAARAARAVAASATKPGPQAQGMQVE 296
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7R9WGK2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGK2_9STRA) HSP 1 Score: 248 bits (634), Expect = 2.290e-77 Identity = 118/168 (70.24%), Postives = 144/168 (85.71%), Query Frame = 1 Query: 313 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 816 LP ++SKAL+AG+FVLGIGTGVT++S INT P+DLASRDAIDRNAPNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL R+R L+ + +V TCK +NTW +VGDL++ PQLSCVYQSDDAQNEFLSNPK G+GEDVYDDDRA+ +K A Sbjct: 16 LPESVSKALLAGIFVLGIGTGVTIESQINTSPKDLASRDAIDRNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-RERKLINDNEVRTCKQKVNTWAFVGDLDNMPQLSCVYQSDDAQNEFLSNPKLGIGEDVYDDDRASLERKRA 182
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7S2SJB4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJB4_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.380e-76 Identity = 127/198 (64.14%), Postives = 149/198 (75.25%), Query Frame = 1 Query: 250 DDVDDRFSAAPQKRERPK----------VPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKS 813 DDVDD + P ER L P L+ L+AGVFVLGIGTGVTVDSAINT+P+DLASRDAIDR APN +CQ YG+SAMV+DQR+FVTFNPF+++V+QADTKPGCVLRSSNVV VLQ K GLL +++ CK MNTWG+VG L+D PQLSCVY+S DAQNEFLSNPK GLGED+YD+ A K + Sbjct: 52 DDVDDFTRSGPSVDERKMREDAVVSGGLARLFPKQLTNYLLAGVFVLGIGTGVTVDSAINTNPKDLASRDAIDRAAPNAELCQQYGASAMVMDQRLFVTFNPFNVYVTQADTKPGCVLRSSNVVPVLQGK-GLLDRDEIAACKNNMNTWGFVGTLDDRPQLSCVYKSQDAQNEFLSNPKIGLGEDIYDNGIPGAGKNA 248
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7S3PTW4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTW4_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.490e-76 Identity = 121/177 (68.36%), Postives = 149/177 (84.18%), Query Frame = 1 Query: 313 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAA--AAKKSAGSEPANG 837 LP ++S AL+AGVFVLGIGTGVTVDS INT P+DLASRDA+D+ APNP +C TYG+SAM DQRVFV+FNPF+++V+QAD KP CVLR+SNVV VLQ RGL+ ++V +CK MNTW +VGDLND+PQLSCVY+S+DAQNEFLS+PKYG+GEDV+DDDR A AA+K + + NG Sbjct: 111 LPESVSTALLAGVFVLGIGTGVTVDSQINTSPKDLASRDAVDQAAPNPRLCSTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRASNVVPVLQ-DRGLINGKEVRSCKQNMNTWAFVGDLNDYPQLSCVYRSEDAQNEFLSDPKYGIGEDVWDDDRVAIEAARKGSVKKVKNG 286
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7S2UF23_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF23_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.090e-75 Identity = 117/166 (70.48%), Postives = 143/166 (86.14%), Query Frame = 1 Query: 313 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKK 810 LP ++SK+L+AG+FVLGIGTGVTVDSAINT+ RDLASRDAIDRNAPNP +C TYG+SAM DQRVFV+FNPF+++V+QAD KP CVLR +N+V +L R+R ++ + +V +CK MNTW YVGDL+D PQLSCVYQS+DAQNEFLSNPK G+GEDV+DDDRA A K Sbjct: 117 LPDSVSKSLLAGIFVLGIGTGVTVDSAINTNERDLASRDAIDRNAPNPELCSTYGASAMAFDQRVFVSFNPFAVYVAQADVKPACVLRPANIVPIL-RERNMINDAEVRSCKKNMNTWAYVGDLDDMPQLSCVYQSEDAQNEFLSNPKLGIGEDVWDDDRAKATGK 281
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7S4WJP8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WJP8_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.820e-74 Identity = 119/191 (62.30%), Postives = 148/191 (77.49%), Query Frame = 1 Query: 244 LYDDVDDRFSAAPQKRERPKVPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAAKKSA 816 L D DR + P LPA++SKAL+AGVFVLGIGTGVT+DS INT+P+DLASRDA+DRNAPNP +C TYG+ AM DQRVFV+FNPF+++V+QAD KP CVLR +NVV +L R++ L+ + +V +CK MNTW +VGDL D PQLSCVY+S+DAQNEFLSNPK G+GEDV+DDDR K +A Sbjct: 100 LGSDDSDRSMSVPSPFGLKSGWRLPASVSKALLAGVFVLGIGTGVTIDSQINTNPKDLASRDAVDRNAPNPELCTTYGAPAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANVVPIL-REKNLINDAEVRSCKQNMNTWAFVGDLQDMPQLSCVYKSEDAQNEFLSNPKLGIGEDVWDDDREKMMKNAA 289
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7S4I7G3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7G3_9STRA) HSP 1 Score: 241 bits (615), Expect = 4.170e-73 Identity = 115/176 (65.34%), Postives = 145/176 (82.39%), Query Frame = 1 Query: 313 LPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRAAAA-KKSAGSEPANG 837 LP ++SKAL+AG+FVLGIG GV ++S +NT P+DLASRDAID+NAPNP +C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV+VL ++R L+ + +V +CK +NTW +VGDL+ PQ+SCVYQSDDAQNEFLSNPK G+GEDVYDDDRAA KKS G + +G Sbjct: 117 LPDSVSKALLAGIFVLGIGAGVAIESQVNTSPKDLASRDAIDKNAPNPTLCAQYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRQSNVVQVL-KERNLINDNEVRSCKQKVNTWAFVGDLDSMPQISCVYQSDDAQNEFLSNPKLGIGEDVYDDDRAALERKKSTGKQIKSG 291
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: W7TER9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TER9_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.820e-72 Identity = 118/184 (64.13%), Postives = 141/184 (76.63%), Query Frame = 1 Query: 262 DRFSAAPQKRERPKV---------PLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLS-NPKYGLGEDVYD 783 DR P R RP+V +P LS AL+ G FVLG+GTGVTVDSA+NT+ +DLASRDAID+NAPNP CQ YG+S +V+D R+FV+FNPF ++V+QAD KPGCVLR++NVV+ LQ RGLLT+E+V CK G NTW YVGD+ND PQLSCVYQSDDAQNEFL NPK G+GEDVYD Sbjct: 89 DRVRPPPFSRGRPEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQG-RGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Match: A0A7R9WZG6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZG6_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.490e-71 Identity = 113/182 (62.09%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 250 DDVDDRFSAAPQKRERPKVPLLPATLSKALVAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYDDDRA 795 DD + + P + LPA++S+A++AGVFVLGIG GVT+DSAINT+PRDLASRDAID+ APN ++C YG+SAM DQRVFV+FNPF+++V+QAD KP CVLR SNVV +L ++R L+ +++V +CK MNTW +VG+L D PQLSCVY+S DAQNEFLSNPKYG+GED DDDRA Sbjct: 26 DDTESDYFDVPSSFGESQGWRLPASVSQAVLAGVFVLGIGLGVTIDSAINTNPRDLASRDAIDQAAPNSSLCANYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPIL-KQRNLINDDEVRSCKANMNTWAFVGNLGDAPQLSCVYKSADAQNEFLSNPKYGIGEDYLDDDRA 206 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7284.16154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7284.16154.1 >prot_L-elsbetiae_contig7284.16154.1 ID=prot_L-elsbetiae_contig7284.16154.1|Name=mRNA_L-elsbetiae_contig7284.16154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp MVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVback to top mRNA from alignment at L-elsbetiae_contig7284:3529..7029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7284.16154.1 ID=mRNA_L-elsbetiae_contig7284.16154.1|Name=mRNA_L-elsbetiae_contig7284.16154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3501bp|location=Sequence derived from alignment at L-elsbetiae_contig7284:3529..7029- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7284:3529..7029- >mRNA_L-elsbetiae_contig7284.16154.1 ID=mRNA_L-elsbetiae_contig7284.16154.1|Name=mRNA_L-elsbetiae_contig7284.16154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig7284:3529..7029- (Laminarionema elsbetiae ELsaHSoW15)back to top |