mRNA_L-elsbetiae_contig7281.16149.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A6H5K7Y7_9PHAE (Signal peptidase complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Y7_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.580e-92 Identity = 131/155 (84.52%), Postives = 141/155 (90.97%), Query Frame = 1 Query: 1 RKVLELGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATARRSYRSMGKGMLVRTDFPRFDERFTVSVEERKPGSKPLEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLEKRARDKKK 465 + VLE+GYEEDHTLNNAKL+VMALACVFAVTAQFWPQPFPESRALLAVCC SYF CS LHLIVTYWEKDLILAT R S RS+GKG+ VRTDFPRFDE +TVSVEERKPGSKP+EE W+VG YFD+EGNFDEWGMGDAVK +V RLEKRARDKKK Sbjct: 30 KAVLEMGYEEDHTLNNAKLAVMALACVFAVTAQFWPQPFPESRALLAVCCFSYFTCSFGLHLIVTYWEKDLILATKRSSSRSLGKGIFVRTDFPRFDEIYTVSVEERKPGSKPIEEQWHVGKYFDYEGNFDEWGMGDAVKNLVTRLEKRARDKKK 184
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: K8YV93_NANGC (Signal peptidase complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV93_NANGC) HSP 1 Score: 132 bits (331), Expect = 1.340e-35 Identity = 69/154 (44.81%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 1 RKVLELGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATAR-RSYRSMGKGMLVRTDFPRFDERFTVSVEERKPGSKP-LEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLEKRARD 456 + +++ GYEE+ +N KL++M +ACVFA+ AQF+P PFPESR LL VCC +YF S + LIV+Y E+D IL T RS G+ + VRT FPRF + +TV VEE P + +++G FD EGNF E G+ V++++ R +K+ D Sbjct: 39 KAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVEEAGMQDPPTVSSKFSIGKVFDEEGNFYEEGLAREVQRLLDRYKKQMWD 192
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7R9Z7Z3_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7Z3_9STRA) HSP 1 Score: 131 bits (330), Expect = 7.660e-35 Identity = 71/150 (47.33%), Postives = 102/150 (68.00%), Query Frame = 1 Query: 28 EDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILAT-----ARRSYRS-MGK-GMLVRTDFPRFDERFTVSVE-ERKPG---SKP-LEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLE 441 EDHT++N KLS+MALAC FA+ AQF P PFP+SR +L CCA+YF S L L+ T+W+KD I+ T A+ S M K G+ +RT PRF E +TV +E ++K G ++P ++ETW+VG +FD EG FDE+G+ + ++++ R E Sbjct: 75 EDHTVDNIKLSIMALACTFAMVAQFAPLPFPDSRPVLGGCCAAYFVLSGFLQLVTTFWDKDCIMVTKAVEKAKNQKNSDMEKYGLRIRTSLPRFSEFYTVIIEFQKKYGDGENRPYVKETWSVGQFFDVEGMFDEYGLENEIEELYERFE 224
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7S1Y7Q9_9STRA (Signal peptidase complex subunit 2 n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y7Q9_9STRA) HSP 1 Score: 128 bits (321), Expect = 6.370e-34 Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 25 EEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILAT------ARRSYRSMGK-GMLVRTDFPRFDERFTVSVE-ERKPGSKPLEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLEKRARDK 459 +ED L+N KL++M LAC+FA AQF P PFP+SR +L +CC YF S L IVT+ +KD IL T A++S ++ + G+ VRTD PRF E + V +E E+ P + + +TW+VG++FD +G FDE GM +AV+ + RLEK DK Sbjct: 56 KEDFRLDNMKLAIMTLACLFACLAQFAPIPFPDSRPVLGICCCIYFVLSGVLQAIVTFLDKDCILITKPTDARAQKSNPNLHQYGIRVRTDLPRFSEYYKVILEFEKMPNTVKVVQTWSVGNFFDVDGYFDEIGMTEAVQGLYKRLEKGEYDK 208
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A8J2SMV2_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMV2_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.250e-33 Identity = 65/147 (44.22%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 1 RKVLELGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATARRSYRSMGKGMLVRTDFPRFDERFTVSVEERKPGSKPLEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLE 441 + VL GY+E H ++N K+S+M +AC+FA AQF P PFP+ R +L VCC YF S L+V Y E+D++L T ++ G+ VRTDFP+F + FT+ VE P + P EE VG +FD G F E G D V+K+V + E Sbjct: 38 KAVLAKGYDEVHFIDNLKISLMIIACLFACAAQFNPIPFPKVRPILGVCCGGYFVFSGIHQLVVKYVERDIVLITKPKNAEH---GLRVRTDFPKFQDLFTIIVEYDTPDAPPYEEKHCVGKFFDTGGYFWEAGFADTVQKMVAKFE 181
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7S3V7R4_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7R4_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.580e-33 Identity = 70/152 (46.05%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 16 LGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATAR--------RSYRSMGK-GMLVRTDFPRFDERFTVSVE-ERKPGSKPLEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLE 441 +G EDH L+N KL +MA+AC FA+ AQF P PFP R +L VCCA YF+ S L LI T+ +KD IL T ++ ++ K G+ VRT FPRF E +TV +E E S +++TW+VG +FD EG FDE+G+ AV+K+ + E Sbjct: 55 IGLHEDHRLSNIKLILMAVACAFAMVAQFSPLPFPNCRPILGVCCAVYFSLSGVLQLITTFLDKDCILITKALEGKPAVVKNNPNLAKYGLRVRTIFPRFSEFYTVRIEFEGLENSPFVKDTWSVGEFFDKEGMFDEYGLQYAVEKLYRKFE 206
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7S1Z321_TRICV (Signal peptidase complex subunit 2 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z321_TRICV) HSP 1 Score: 125 bits (314), Expect = 2.010e-32 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 28 EDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILAT-------ARRSYRSMGKGMLVRTDFPRFDERFTVSVEERK---PGSKP--LEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRL 438 EDH ++N KL++MA+AC FA+ AQF P PFP+SR +L CCA+YF S L ++ T+W+KD I+ T A ++ G+ +RT PRF E +TV +E +K P K ++ETW+VG +FD EG FDE+G+ D V+ + R Sbjct: 82 EDHAIDNIKLTIMAVACAFAMVAQFAPLPFPDSRPVLGGCCAAYFLLSGILQIVTTFWDKDCIMVTKPVEKGVAPKNLDMEKYGLRIRTILPRFSEYYTVIMEFQKKHEPDEKRKFVKETWSVGQFFDVEGMFDEFGLMDEVEDLYERF 230
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7S2CUY6_9STRA (Signal peptidase complex subunit 2 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUY6_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.670e-30 Identity = 62/142 (43.66%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 22 YEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATARRSYRSMGK-GMLVRTDFPRFDERFTVSVEERKPGSKP-LEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLE 441 Y+E+H +N KL +M +AC FA+ AQF+P PFPESR LL +CCA+YF S L IVTY E+D I+ T ++ ++ K G+ +RT FPRF +TV VE+ + + P + +T+ + YF +G FD G + V K V + E Sbjct: 81 YDENHYWDNVKLLLMVVACAFAMVAQFYPMPFPESRPLLGICCAAYFVASTVLQGIVTYIEQDTIMLTHAKNRQTAEKEGLRIRTTFPRFQYDYTVVVEKAETKNGPSVSQTYLITKYFTEDGWFDAEGFEEDVTKQVQKFE 222
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A7S2QZQ2_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZQ2_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.820e-29 Identity = 65/156 (41.67%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 16 LGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATARRSYRSMGK--------------GMLVRTDFPRFDERFTVSVEERKPGSKP-LEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRL 438 L EDH L+N KL +M L CVFA+ AQF P PFP+SR +L CCA+YF S L L+ T+ +KD I+ T S + K G+ VRT P+F E FTV +E + + P +++TW+VG +FD EG FDE+G+ + V+ + R Sbjct: 80 LALSEDHGLDNIKLFLMTLGCVFAMFAQFAPLPFPDSRFVLGACCATYFLISGVLQLMTTFLDKDCIMITKPVSSDIIKKHKMDASKNKDISKYGLRVRTQLPKFSEFFTVILEFQDMDNTPFVKQTWSVGKFFDVEGMFDEYGLVEQVEMLFRRF 235
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Match: A0A1E7FG03_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG03_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.840e-29 Identity = 69/168 (41.07%), Postives = 95/168 (56.55%), Query Frame = 1 Query: 25 EEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCASYFACSLALHLIVTYWEKDLILATA----------------------RRSYRSM------GKGMLVRTDFPRFDERFTVSVE-ERKPGSKPLEETWNVGSYFDFEGNFDEWGMGDAVKKVVGRLE 441 +ED+ +N KL +MA+AC FA+ AQF P PFPESR ++ VCCASYF S L LI T ++D IL T R+S + + G G+ VR+ F RF E +TV +E E+K + +E+ W+VG +FD EG FDE G+ V+K+ RLE Sbjct: 31 DEDYHFDNFKLLLMAIACAFAMVAQFAPLPFPESRIVIGVCCASYFVLSTVLQLITTIIDQDCILLTRPLPKDGKKDDPNDIDIIGRTIFRKSPKDIKNKDLFGYGVRVRSQFERFSEWYTVILEFEQKKDTPCVEQKWSVGQFFDTEGMFDEIGLQMEVEKLYRRLE 198 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7281.16149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7281.16149.1 >prot_L-elsbetiae_contig7281.16149.1 ID=prot_L-elsbetiae_contig7281.16149.1|Name=mRNA_L-elsbetiae_contig7281.16149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp RKVLELGYEEDHTLNNAKLSVMALACVFAVTAQFWPQPFPESRALLAVCCback to top mRNA from alignment at L-elsbetiae_contig7281:3881..8982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7281.16149.1 ID=mRNA_L-elsbetiae_contig7281.16149.1|Name=mRNA_L-elsbetiae_contig7281.16149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5102bp|location=Sequence derived from alignment at L-elsbetiae_contig7281:3881..8982- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7281:3881..8982- >mRNA_L-elsbetiae_contig7281.16149.1 ID=mRNA_L-elsbetiae_contig7281.16149.1|Name=mRNA_L-elsbetiae_contig7281.16149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=990bp|location=Sequence derived from alignment at L-elsbetiae_contig7281:3881..8982- (Laminarionema elsbetiae ELsaHSoW15)back to top |