mRNA_L-elsbetiae_contig7261.16131.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: D7G2R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R1_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 1.760e-14 Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 2 Query: 1046 KTGEKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQN 1180 + GEKHIGTGGMADTRDP+ ++H DPRKSISAAPSFAEYLKSKQN Sbjct: 165 QAGEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 209
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: D8LKW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW1_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.920e-13 Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 2 Query: 1031 AAQAKKTGEKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQN 1180 + + KT H GTGGMADTRDP PVNHADPRKSISAAPSFAEYLKSK+N Sbjct: 329 SGSSSKTAPGHKGTGGMADTRDPAPVNHADPRKSISAAPSFAEYLKSKKN 378
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: D7G2R0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R0_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 9.200e-13 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 1043 KKTGEKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQN 1180 K EKHIGTGGMADTRDP+ ++H DPRKSISAAPSFAEYLKSKQN Sbjct: 369 KAADEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 414
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A835YLE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.120e-12 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 2 Query: 1055 EKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQ 1177 EKH G GGMADTRDPEPV+H DPRKSIS AP+F EY+K KQ Sbjct: 33 EKHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 73
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A835YTB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.120e-12 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 2 Query: 1055 EKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQ 1177 EKH G GGMADTRDPEPV+H DPRKSIS AP+F EY+K KQ Sbjct: 35 EKHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 75
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A6H5JPP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP9_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 6.080e-11 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 1040 AKKTGEKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQN 1180 + KT H GTGGMADTRDP PV H DPRKSI AAPSFAEYLKSK+N Sbjct: 311 SSKTPPGHKGTGGMADTRDPAPVKHEDPRKSIPAAPSFAEYLKSKRN 357
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A7S2XX01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX01_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.550e-10 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 1049 TGEKHIGTGGMADTRDPEP-VNHADPRKSISAAPSFAEYLKSKQ 1177 TG H+G+GGMADTRDPEP +N +DPR+SISAAPSF EYLKS+Q Sbjct: 119 TGAGHVGSGGMADTRDPEPFINESDPRQSISAAPSFEEYLKSRQ 162
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A7S1Z902_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z902_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.850e-10 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 2 Query: 1061 HIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSK 1174 HIG+GGMADTR+P+ +NH DPRKSISAAPSF EYLKS+ Sbjct: 34 HIGSGGMADTRNPDALNHEDPRKSISAAPSFEEYLKSR 71
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: A0A7S2MQH4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQH4_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.800e-10 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 1061 HIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSK 1174 HIG+GGMADTRDP+ + H DPRKSISAAPSF EYLKS+ Sbjct: 33 HIGSGGMADTRDPDAMEHEDPRKSISAAPSFEEYLKSR 70
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Match: K0TRG6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRG6_THAOC) HSP 1 Score: 65.1 bits (157), Expect = 6.330e-9 Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 2 Query: 1052 GEKHIGTGGMADTRDPEPVNHADPRKSISAAPSFAEYLKSKQ 1177 GEK +G+GGMADTRDPE DPRKSISAAPSF EYLK ++ Sbjct: 90 GEKKLGSGGMADTRDPEAFEDEDPRKSISAAPSFEEYLKQRE 131 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7261.16131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7261.16131.1 >prot_L-elsbetiae_contig7261.16131.1 ID=prot_L-elsbetiae_contig7261.16131.1|Name=mRNA_L-elsbetiae_contig7261.16131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=365bp MEEERAAVHAANLERQKEAFDQESKPFVAPGSVSSASAPTAGGGGVSRPAback to top mRNA from alignment at L-elsbetiae_contig7261:1408..4922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7261.16131.1 ID=mRNA_L-elsbetiae_contig7261.16131.1|Name=mRNA_L-elsbetiae_contig7261.16131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3515bp|location=Sequence derived from alignment at L-elsbetiae_contig7261:1408..4922- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7261:1408..4922- >mRNA_L-elsbetiae_contig7261.16131.1 ID=mRNA_L-elsbetiae_contig7261.16131.1|Name=mRNA_L-elsbetiae_contig7261.16131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2190bp|location=Sequence derived from alignment at L-elsbetiae_contig7261:1408..4922- (Laminarionema elsbetiae ELsaHSoW15)back to top |