mRNA_L-elsbetiae_contig725.16115.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig725.16115.1
Unique NamemRNA_L-elsbetiae_contig725.16115.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: UPI000C78772E (dnaJ homolog subfamily C member 9-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78772E)

HSP 1 Score: 99.0 bits (245), Expect = 3.460e-23
Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQLILYTTHDAIR 357
            EYWR LFPK+TV DI+ F KKYKGSEEEK D+ +AY + +G M  I+DS++L +  DEDRFR +ID  I+ KEV  F A+    K +  ++K AAK++A   +    ++ L  T D+++
Sbjct:  100 EYWRVLFPKVTVKDIQEFEKKYKGSEEEKEDLKKAYLEGEGSMDFILDSVLLCSVEDEDRFREIIDQMIKKKEVKKFKAYSTEDKKAVNARKRAAKKEADEAEQARKEMGLDDTDDSLK 218          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: A0A1W0A4M0_9STRA (J domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4M0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.610e-21
Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKA 297
            EYWR LFPK+TV DIE+F   Y+ SEEE +DVL+AY+K+KGKM +I+D IML T  D +RF  +I  AI+++EV  + AF+K  K    +KK+ A+ KA
Sbjct:   98 EYWRALFPKVTVKDIENFETSYRDSEEEAQDVLKAYEKYKGKMQSILDVIMLSTENDIERFSDIIQRAIDAEEVPMYPAFKKKPKAKRNNKKAEAEAKA 196          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: T0R0U8_SAPDV (J domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R0U8_SAPDV)

HSP 1 Score: 91.3 bits (225), Expect = 6.400e-20
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAF-QKAAKTSAGSKKSAAKRKA 297
            +YWR LFPK+T  DI+SF ++Y+GS+EE RDVL AY+K+KGK  +I+D +ML +  D DRF  +I  AI++ EV  + AF +K  KT + SKK AA+ KA
Sbjct:   99 DYWRNLFPKVTTKDIQSFEQEYRGSDEEARDVLNAYEKYKGKWTSIMDVVMLSSDDDMDRFSKIIQEAIDANEVPLYPAFTKKTIKTRSKSKKVAAEAKA 198          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: K7G8A0_PELSI (DnaJ heat shock protein family (Hsp40) member C9 n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7G8A0_PELSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.550e-19
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQLILYTTHDAIR 357
            EYWR LF KIT+ DIE F KKYKGSEEE  D+  AYK  KG M  I++S++    ADE R R VI  AIES EV S+  F K +K    ++K  A+ +AK  + T  +L L    D ++
Sbjct:   73 EYWRLLFKKITIKDIEDFEKKYKGSEEELADIKAAYKDFKGDMDKIMESVLCVDYADEPRIRKVIQQAIESGEVPSYKVFVKESKQKMNARKRRAQEEAKEAEKTREELGLGEGEDDLK 191          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: UPI001B7EEBE2 (dnaJ homolog subfamily C member 9 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7EEBE2)

HSP 1 Score: 87.0 bits (214), Expect = 2.140e-18
Identity = 47/119 (39.50%), Postives = 77/119 (64.71%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQLILYTTHDAIR 357
            EYWR LF K+TV DI++F  KYKGSEEEK D+ +AY   +G M +I++S++  T+ DE R R +++ AIE++E+ +++AF K +     ++K    R+AK  +    +L L    D+++
Sbjct:   99 EYWRLLFKKVTVADIKNFEDKYKGSEEEKADIKQAYLDFEGDMDSIMESVLCSTSGDESRIRVILETAIEAEELPAYTAFTKESTNKQRARKRRGDREAKEAEAARQELGLEDGSDSLK 217          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: A0A3P8XFM7_ESOLU (DnaJ heat shock protein family (Hsp40) member C9 n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XFM7_ESOLU)

HSP 1 Score: 86.3 bits (212), Expect = 3.750e-18
Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQL 327
            EYWRT+FPKIT+ DI  F K YK SEEEK D++ AY++HKG M  I+++++  T  DE R R ++  A++SKE+    AF       +  KKS  KRKA  ++  A ++
Sbjct:   97 EYWRTMFPKITLQDILDFEKSYKDSEEEKHDLMRAYEEHKGDMDKIMENVLCATQEDEPRIRAILQCALDSKELPPHRAFT----NESAKKKSVRKRKADKERKEAEEM 201          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: A0A8C8RKL9_9SAUR (DnaJ heat shock protein family (Hsp40) member C9 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8RKL9_9SAUR)

HSP 1 Score: 85.9 bits (211), Expect = 5.990e-18
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQLILYTTHDAIR 357
            EYWR LF KITV DIE F KKYKGSEEE  D+  AYK  KG +  I++S++    ADE R R +I  AI+S EV S+  F K +K    ++K  A+ +AK  + T  +L L    D ++
Sbjct:   99 EYWRLLFKKITVKDIEDFEKKYKGSEEELADIKAAYKDFKGDVDKIMESVLCVDYADEPRIRKIIQEAIDSGEVPSYKLFVKESKQKMNARKRRAREEAKEAEKTREELGLGEGEDDLK 217          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: E4X3N5_OIKDI (J domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X3N5_OIKDI)

HSP 1 Score: 85.9 bits (211), Expect = 6.180e-18
Identity = 41/80 (51.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAF 240
            +YWR ++PKIT+  I+ F+++Y+GS+EE+ D+L+AYKKHKGKMG I++ I   T  DEDRF  ++  AI+ KE+ S+ AF
Sbjct:  101 DYWRQVYPKITLDQIKKFTEEYQGSDEERIDLLDAYKKHKGKMGKIMEEIPASTFEDEDRFVIILKQAIKDKELKSYKAF 180          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: A0A7M4EU20_CROPO (DnaJ heat shock protein family (Hsp40) member C9 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4EU20_CROPO)

HSP 1 Score: 85.5 bits (210), Expect = 6.880e-18
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAKVDKVTAPQLILYTTHDAIR 357
            EYWR LF KITV DI+ F KKYKGSEEE  D+  AYK  KG M  I++S++     DE R R +I  AI+S EV S+ AF K AK    ++K  A+ +AK  + +  +L L    D ++
Sbjct:   99 EYWRLLFKKITVKDIQDFEKKYKGSEEELTDIKSAYKDFKGDMDRIMESVLCVDYTDEPRIRKIIQQAIDSGEVPSYKAFIKEAKQKMDARKRRAEEEAKEAEKSREELGLGEGEDDLK 217          
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Match: A0A8C6SLT3_9GOBI (DnaJ (Hsp40) homolog, subfamily C, member 9 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6SLT3_9GOBI)

HSP 1 Score: 85.1 bits (209), Expect = 1.010e-17
Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query:    1 EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSIMLGTTADEDRFRTVIDAAIESKEVSSFSAF 240
            EYWR LFPKIT+ DI  F +KYKG++EE+ DVL+ Y + +G M AI++S +  T  DE R  ++I  AIE+KEV++FSAF
Sbjct:   97 EYWRVLFPKITLQDIREFERKYKGTDEERADVLQLYVQFEGNMNAIMESALCSTLEDEPRICSIIQDAIENKEVTAFSAF 176          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig725.16115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C78772E3.460e-2346.22dnaJ homolog subfamily C member 9-like n=1 Tax=Eur... [more]
A0A1W0A4M0_9STRA5.610e-2152.53J domain-containing protein n=1 Tax=Thraustotheca ... [more]
T0R0U8_SAPDV6.400e-2052.00J domain-containing protein n=1 Tax=Saprolegnia di... [more]
K7G8A0_PELSI3.550e-1947.06DnaJ heat shock protein family (Hsp40) member C9 n... [more]
UPI001B7EEBE22.140e-1839.50dnaJ homolog subfamily C member 9 n=1 Tax=Carcharo... [more]
A0A3P8XFM7_ESOLU3.750e-1844.04DnaJ heat shock protein family (Hsp40) member C9 n... [more]
A0A8C8RKL9_9SAUR5.990e-1845.38DnaJ heat shock protein family (Hsp40) member C9 n... [more]
E4X3N5_OIKDI6.180e-1851.25J domain-containing protein n=1 Tax=Oikopleura dio... [more]
A0A7M4EU20_CROPO6.880e-1845.38DnaJ heat shock protein family (Hsp40) member C9 n... [more]
A0A8C6SLT3_9GOBI1.010e-1753.75DnaJ (Hsp40) homolog, subfamily C, member 9 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig725contigL-elsbetiae_contig725:21157..22305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.2
Seed ortholog evalue8.8e-17
Seed eggNOG ortholog112098.XP_008606265.1
KEGG koko:K09529
Hectar predicted targeting categoryother localisation
EggNOG free text desc.heat shock protein binding
EggNOG OGsCOG2214@1,KOG0719@2759
Ec32 orthologEc-24_000680.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Ec32 ortholog descriptionDnaJ domain
Ec32 orthologEc-24_000680.1
Exons2
Model size357
Cds size357
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816808.0932198-CDS-L-elsbetiae_contig725:21156..214441622816808.0932198-CDS-L-elsbetiae_contig725:21156..21444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig725 21157..21444 -
1691683828.9720705-CDS-L-elsbetiae_contig725:21156..214441691683828.9720705-CDS-L-elsbetiae_contig725:21156..21444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig725 21157..21444 -
1622816808.1054046-CDS-L-elsbetiae_contig725:22236..223051622816808.1054046-CDS-L-elsbetiae_contig725:22236..22305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig725 22237..22305 -
1691683828.9856687-CDS-L-elsbetiae_contig725:22236..223051691683828.9856687-CDS-L-elsbetiae_contig725:22236..22305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig725 22237..22305 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig725.16115.1prot_L-elsbetiae_contig725.16115.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig725 21157..22305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig725.16115.1

>prot_L-elsbetiae_contig725.16115.1 ID=prot_L-elsbetiae_contig725.16115.1|Name=mRNA_L-elsbetiae_contig725.16115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
EYWRTLFPKITVIDIESFSKKYKGSEEEKRDVLEAYKKHKGKMGAIVDSI
MLGTTADEDRFRTVIDAAIESKEVSSFSAFQKAAKTSAGSKKSAAKRKAK
VDKVTAPQLILYTTHDAIR
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mRNA from alignment at L-elsbetiae_contig725:21157..22305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig725.16115.1 ID=mRNA_L-elsbetiae_contig725.16115.1|Name=mRNA_L-elsbetiae_contig725.16115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1149bp|location=Sequence derived from alignment at L-elsbetiae_contig725:21157..22305- (Laminarionema elsbetiae ELsaHSoW15)
GAGTACTGGCGCACCTTGTTCCCCAAAATCACCGTAATTGACATCGAGTC TTTCAGCAAGAAGTACAAGGTGAGCGGCGGCGATTCGAAAAGGGAGAGAA CGCATACAACTTACGTACTCCGGACCCTTACCGCTGGACTGAGCGAGCAT ATAAGAAGTAAGACACACCATGAGTACAAGCCAAAAACGTGGCACGAGTA AGAGCTGCGTGGTGTGTGGCAATTTCCTGGACTAAGAGAACACCAGAGCC TCTTTCCTTCAACCCGCTCGCCCCTTCCACCATCCCGCGGAGAATGGAGT GCTTGATAGTCTTGGCGTGGGATGGTTGGTTAGACTAGGGGGCTCGATTA CTACGGTTGGTGTCTCATCAGGAGCACGCACCCGCCGCGTGTACAACTTC CGCGTCCAGTTATGTAGAGAATAATCACAGCAGTACGTGCAGCATGTGAC GCTACCGGTTTGCATTAGAGGCTATAGTAATGAGCCGAACCAAGCCGACG GTTGTACGTGTGGATTTCAGCCAGAGGAAGGCATGGGATGGCAGTGTTGA AGTTAGAGTTGCGGATAAAAGCAAAGAAAGGGCTGCATGGCAGAGCAAGG AAAGCTATAGGCCCTACTTGCGTACCCTGGAGCTTGGTATGTAGCTTTAC TAGCGCTCGCAGAGAACTACAAGTAACCTGAAATGAGAGGTTTCGGGACG AGTGGTTTCGAGAAAAAAAATGGAATATCGCCAGTTGCAGAGGCAAACCA CAGTGTGACTGTTGTGGTGTCGCCACCCCCCCCCTTTATGGGTTCAGGTG GGAATGATGCGCTTTACAAACCTCGCCAGCACATACACATGTATGTCTGC TTTCTTGCCAGGGCTCTGAGGAGGAGAAGCGAGATGTTCTCGAAGCGTAC AAGAAGCATAAGGGGAAGATGGGCGCAATCGTGGACTCGATAATGCTCGG TACGACGGCGGACGAGGACCGGTTTAGGACTGTGATCGACGCCGCGATTG AGTCGAAAGAGGTTTCTTCTTTCTCAGCATTCCAGAAAGCAGCAAAGACC AGTGCGGGATCTAAGAAGTCCGCAGCAAAGCGGAAAGCAAAGGTTGACAA GGTAACTGCACCACAGCTAATACTGTACACCACGCATGATGCCATCCGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig725:21157..22305-

>mRNA_L-elsbetiae_contig725.16115.1 ID=mRNA_L-elsbetiae_contig725.16115.1|Name=mRNA_L-elsbetiae_contig725.16115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig725:21157..22305- (Laminarionema elsbetiae ELsaHSoW15)
GAGTACTGGCGCACCTTGTTCCCCAAAATCACCGTAATTGACATCGAGTC
TTTCAGCAAGAAGTACAAGGAGTACTGGCGCACCTTGTTCCCCAAAATCA
CCGTAATTGACATCGAGTCTTTCAGCAAGAAGTACAAGGGCTCTGAGGAG
GAGAAGCGAGATGTTCTCGAAGCGTACAAGAAGCATAAGGGGAAGATGGG
CGCAATCGTGGACTCGATAATGCTCGGTACGACGGCGGACGAGGACCGGT
TTAGGACTGTGATCGACGCCGCGATTGAGTCGAAAGAGGTTTCTTCTTTC
TCAGCATTCCAGAAAGCAGCAAAGACCAGTGCGGGATCTAAGAAGTCCGC
AGCAAAGCGGAAAGCAAAGGTTGACAAGGTAACTGCACCACAGCTAATAC
TGTACACCACGCATGATGCCATCCGTGGCTCTGAGGAGGAGAAGCGAGAT
GTTCTCGAAGCGTACAAGAAGCATAAGGGGAAGATGGGCGCAATCGTGGA
CTCGATAATGCTCGGTACGACGGCGGACGAGGACCGGTTTAGGACTGTGA
TCGACGCCGCGATTGAGTCGAAAGAGGTTTCTTCTTTCTCAGCATTCCAG
AAAGCAGCAAAGACCAGTGCGGGATCTAAGAAGTCCGCAGCAAAGCGGAA
AGCAAAGGTTGACAAGGTAACTGCACCACAGCTAATACTGTACACCACGC
ATGATGCCATCCGT
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