mRNA_L-elsbetiae_contig7237.16098.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7237.16098.1 vs. uniprot
Match: D8LN18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN18_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.600e-48 Identity = 138/273 (50.55%), Postives = 160/273 (58.61%), Query Frame = 1 Query: 748 DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLEVSTLSRQREEMLALNRERNGEWLRLVRMEESCRRLGEREREASRRWASEEKAWRKQLSEAQEQYRVERDRTE----------------------------------FRLGSMTERLNSELEGERAKSGDLEEKLRMLREDLAAAEDKSERLTPRVKALEEANEALRGELAAVSGRCSDAELELSRLQVYRPLVEHADSIDRRRGEAEEGLRAATAELGRERESSAAAKEEATQLRSRL 1464 DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLE S + +RR EE+AWRKQL + QEQ R ERDR E FR G++TERLN+E+E ERAKS LE+KLR+L E+LA A RL P VK+++ ANEALR EL S R S+ ELEL++L+VYRPLVE AD IDRRR AEEGLRAATAEL RER++ AAAK+ A +LR L Sbjct: 114 DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLEASA-------------------------------------DTARRCTREEEAWRKQLRDMQEQCRAERDRAEELAALEPALAKARSEAVAXXXXXARDEAGRAEAEFRAGTITERLNAEMERERAKSRGLEDKLRVLEEELAGAN----RLIPEVKSIQGANEALRAELVVASERRSEVELELAQLKVYRPLVERADFIDRRRVAAEEGLRAATAELSRERDALAAAKDGAAELRLAL 345 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7237.16098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7237.16098.1 >prot_L-elsbetiae_contig7237.16098.1 ID=prot_L-elsbetiae_contig7237.16098.1|Name=mRNA_L-elsbetiae_contig7237.16098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp MPSEREPPPRRRKTPTTTTTTATTAAAAARPCRVTPPSPAPRRRRRRREQback to top mRNA from alignment at L-elsbetiae_contig7237:2150..7513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7237.16098.1 ID=mRNA_L-elsbetiae_contig7237.16098.1|Name=mRNA_L-elsbetiae_contig7237.16098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5364bp|location=Sequence derived from alignment at L-elsbetiae_contig7237:2150..7513+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7237:2150..7513+ >mRNA_L-elsbetiae_contig7237.16098.1 ID=mRNA_L-elsbetiae_contig7237.16098.1|Name=mRNA_L-elsbetiae_contig7237.16098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2340bp|location=Sequence derived from alignment at L-elsbetiae_contig7237:2150..7513+ (Laminarionema elsbetiae ELsaHSoW15)back to top |