mRNA_L-elsbetiae_contig7224.16078.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 433 bits (1114), Expect = 1.630e-146 Identity = 219/277 (79.06%), Postives = 248/277 (89.53%), Query Frame = 1 Query: 169 CCAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-ESGEELARQAGLIIATALGEE-GVPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLE 993 CCAVVYVSEGRN+ LLDALA+AA PG+AGLIRQFRD QYHRTGFTIGG CP AVARASVEVSR+A+R+IDL HEA HPRIGVVDHVSVHPLG E +E+A++AGL IATALG++ G+PVLLYGDL NGRRLAEVRRSTPYF G++PATIDADLGPNEVDASRG+ TVGCTPLVTNYNILLSTDDKR+ASKVT+S+RE+DGGLPWVE+LTL+R+DG +EAACNLLRP++TT A VLA AEEQAA +GIRVV+HYETGLT+E A AAISRL E Sbjct: 35 CCAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSE 311
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 218 bits (554), Expect = 6.690e-63 Identity = 127/277 (45.85%), Postives = 163/277 (58.84%), Query Frame = 1 Query: 172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLH-EANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGEEG-VPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATID-ADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLE 993 C VYVSEGRN LLD L A + PG L+++F D YHR+ FT+GG P V ++ V +A +D+ H +A HPR+GVVDHVS HPLG + E+AR+A + +G + VPVLLYG N + LA+VRRST YF A + AD GP +VD GL+ G P V N+NI L T +K++A+ VTK+VR RDGG VEALTLR E G E ACNLL T A VL A + A G+ V E Y G+T + A ++LE Sbjct: 16 CCKVYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILAETKHVLLE 290
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 205 bits (522), Expect = 1.200e-57 Identity = 124/279 (44.44%), Postives = 163/279 (58.42%), Query Frame = 1 Query: 181 VYVSEGRNTHLLDALADAA--TAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGES---GEELARQAGLIIATALGEEGVPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLG-IRVVEHYETGLTEEGASAAISRLMLEGR 999 +YVSEGR+ ++ L + A + L+ +F D Y+RT F G +V+R EV+ A+ S++L HEA+HPRIGVVDH+SVHPLGE+ EE AR+ G T E+G+P+L YG L NG+RL+ VRRST YF G + ADLGP VD RG + VG P V NYN+ D++ + +++RE+DGGLP VEA+ LR G YEAACNLL + P VLAAA AA G I V Y GLT + ++R L GR Sbjct: 57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHYS-SVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGETMVFAEEAAREIGAYFGT---EKGIPILFYGSL-NGKRLSAVRRSTSYFRGGQ-DREVAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARA-LAGR 328
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO) HSP 1 Score: 203 bits (517), Expect = 2.240e-57 Identity = 128/290 (44.14%), Postives = 170/290 (58.62%), Query Frame = 1 Query: 181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEEL--ARQAGLIIATALGEE--GVPVLLYGDL-KNGRRLAEVRRSTPYF----------ASGDI-PATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLEGRK 1002 VY+SEG LL+ L A+ D G+A L+ F D+ Y+RTGFT+ P +AR +V ++R AL +IDLRLH A+HPR+GVVDH+S HPLG +G L A +A +I LGE VPV LYG KN + LA++RR+ YF ASG I P + D GP +D SRGL TVG P V NYN+LL TDD +++ ++ ++V R GGLP VEA+ L E G E ACNLL ++P V AA ++ A GI V + Y TG T E +++ K Sbjct: 15 VYISEGSKLALLEQLKGVAST-DTGTA-LVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLG-TGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHE-GGVEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEELCTLAEQILAAQTK 300
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC) HSP 1 Score: 186 bits (473), Expect = 5.650e-51 Identity = 120/284 (42.25%), Postives = 161/284 (56.69%), Query Frame = 1 Query: 160 STGCCAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-ESGEELARQAGLIIATALGEE--GVPVLLYGDLKNGRR-LAEVRRSTPYFASG-----------DIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDG---AYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957 ++GC VY+SEG + L+ L A GSA L+ F D+ Y+RTGFT+ P +A + V ++R AL +IDLR H A+HPR+GVVDH+S HPLG ++ A + I T LGE VPV LYG + +R LA++RR+ YF +PA + D GP+E+D RGL TVG P V N+NILL TDD ++A ++ ++V R GGLP VEA+ L E+G E ACNLL + V A+ +E A GI V Y TG T E Sbjct: 5 ASGCN--VYISEGLRSTLVQQLKVCADKCISGSA-LVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPE 285
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE) HSP 1 Score: 176 bits (445), Expect = 2.550e-47 Identity = 113/269 (42.01%), Postives = 146/269 (54.28%), Query Frame = 1 Query: 181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALG--EEGVPVL---LYGDLKNGRR-LAEVRRSTPYFASG------------DIPATIDA-----DLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGI 918 VY+SEGR+ L+ L +AA A PG A L+ F+DE YHRTGFT+ P + A V +SR AL+ +DLR H+A+HPR+GVVDH+++HPLG A + + T G EE VP L YG RR LA++RR YF +PA D DLGP A G+VT+G TP V NYN+ LS D A K+ K++ ER GGLP V+A+ L+ DG E ACNLL P + A E A G+ Sbjct: 3 VYISEGRDKALIGKL-EAAAQATPGVA-LVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO) HSP 1 Score: 169 bits (428), Expect = 5.390e-45 Identity = 108/261 (41.38%), Postives = 137/261 (52.49%), Query Frame = 1 Query: 181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-----ESGEELARQAGLIIATALGEEGVPVLLYGDLK-NGRRLAEVRRSTPYF---ASGDIPATID------ADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGI 918 VY SEG N LL L + + L+ +F D Y+R+ FT+ A A+ E+++ A+ ++DLR HEA+HPR+GVVDH+S HPL E LAR G I+ PV LYG GRRLA++RRS YF A ID DLGP V G+V VG + +TNYNILL+T D K+ + V ER GGLP V+A+ LR +GA E ACNLL T P VL AA GI Sbjct: 2 VYXSEGXNVKLLKTLEQLVSGRN--GVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAAAMEDAAALARSIGSIVXAE--PTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGI 258
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A804P0U8_MAIZE (Uncharacterized protein n=14 Tax=Zea mays TaxID=4577 RepID=A0A804P0U8_MAIZE) HSP 1 Score: 166 bits (419), Expect = 3.240e-43 Identity = 108/281 (38.43%), Postives = 144/281 (51.25%), Query Frame = 1 Query: 172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTI------GGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGEE-GVPVLLYGDL-KNGRRLAEVRRSTPYFA-----------SGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957 C +Y+SE RN+ L A+ AA A P A L+ F D+ Y+R G+T+ GG P + AS V A+ ++DL H HPR+GVVDHV+ HPL + E +A +G+ VP LYG ++GR LA +RR YF + D + D GP AS G+V VG TP V NYN+ L+T D VA ++ ++V ER GGL V+A+ L DGA E ACNLL P V AA LG+ V + Y T L+ E Sbjct: 9 CCKLYISEARNSGALRAIEHAAAALRP-LAVLVNTFADDAYNRVGYTLVSPLAGGGASP-PLRCASFRVVAAAIEAVDLDAHAGAHPRLGVVDHVAFHPLASAHLEDVTALARAVAADIGDRLQVPTYLYGAAHRDGRTLASIRRQLGYFTPTSPGGEQWHGAPDSLLPVAPDAGPRTSSASNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSRE 287
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A7S1SLQ1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLQ1_9CHLO) HSP 1 Score: 162 bits (410), Expect = 2.180e-42 Identity = 98/243 (40.33%), Postives = 135/243 (55.56%), Query Frame = 1 Query: 265 LIRQFRDEQYHRTGFTIGGVCPLAVARASV---EVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGES---GEELARQAGLIIATALGEEGVPVLLYGDLKNG-RRLAEVRRSTPYFA-------SGDIPAT--IDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETG 945 L+ F E YHRT FT+ C ++ SV +++ A+ +DL +H+A HPR+GVVDH+S HPLG S GE + + G P LYG G RRLA++RR+ YF SG I + + AD GP +VD G+V VG TP V N+N+LL++ D + ++K+V +R GGLP VE++ LR G E ACNLL + + P VL E AAT G+ V + YE G Sbjct: 6 LLNNFGGEPYHRTSFTL---CSPSIHELSVVASSIAKAAIARLDLTVHQATHPRLGVVDHISCHPLGVSASLGEAASLAHAIGSCVGGGPHPAPTFLYGAADGGGRRLADLRRAFGYFDGAAGGQWSGAIRGSEALRADFGPTDVDERVGIVAVGATPWVVNFNVLLNSTDMTLGRSISKAVSQRGGGLPAVESMALRHTGGLIEVACNLLDYKISGPDAVLKRVTELAATEGVEVKQWYEIG 245
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A811SGE6_9POAL (Hypothetical protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A811SGE6_9POAL) HSP 1 Score: 157 bits (397), Expect = 5.810e-40 Identity = 104/289 (35.99%), Postives = 142/289 (49.13%), Query Frame = 1 Query: 172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLA---------VARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGE--EGVPVLLYGDL-KNGRRLAEVRRSTPYFASGDI---------------PATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957 C +Y+SE RN L A+ AA P +A L+ F D+ Y+R G+T+ V PLA + RA+ V AL ++D H HPR+GVVDHV+ HPL + E +A +G+ + VP LYG K+GR LA +RR YF + P + D GP S+G+V VG T V NYN+ + T D A ++ ++V ER GGL V+A+ L DGA E ACNLL P V AA +G+ V E Y T ++E Sbjct: 8 CCKLYISEARNAGALRAIERAAAGLRP-AAVLVNAFADDDYNRVGYTL--VSPLAGDVAASPPPLHRAAFRVVAAALEAVDFGAHAGAHPRLGVVDHVAFHPLAGARLEDVAALTRAVAADIGDKLQAVPTYLYGAAHKDGRTLASIRRQLGYFTPTSLGGEQWRGAPDSWPSSPLPVAHDAGPGTPSRSKGVVVVGATAWVDNYNVPVRTADVGAARRIARAVSERGGGLASVQAMGLAHGDGAAEVACNLLDPAAVGAEQVQERVRRLAAEMGVGVGEGYFTDFSQE 293 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7224.16078.1 >prot_L-elsbetiae_contig7224.16078.1 ID=prot_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp MLSLHRGSFLATKSADRVRFTITRHALSTGCCAVVYVSEGRNTHLLDALAback to top mRNA from alignment at L-elsbetiae_contig7224:2925..6437- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7224.16078.1 ID=mRNA_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3513bp|location=Sequence derived from alignment at L-elsbetiae_contig7224:2925..6437- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7224:2925..6437- >mRNA_L-elsbetiae_contig7224.16078.1 ID=mRNA_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig7224:2925..6437- (Laminarionema elsbetiae ELsaHSoW15)back to top |