mRNA_L-elsbetiae_contig7223.16077.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7223.16077.1
Unique NamemRNA_L-elsbetiae_contig7223.16077.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7223.16077.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 2.900e-103
Identity = 200/289 (69.20%), Postives = 228/289 (78.89%), Query Frame = 1
Query: 1075 GVGEGGKAFVEGASKALAVNRERVMGWMKELRPKDWSPKDAGPEAEAESLQELRRAVRRIYLDAPDPAVHTAMVVARARPPAPKLGEVAEDVGSD-------AAAVGGSAGAGAEVGTAVRGVDRVIGTGADRQLTQLVWFRSSTGGGFAEIKGVDGPYYQPSADDVGMRICIKCTLAGAALSLGGTGG---LSPVG-GKGRRGRHARGGRRGGSRTPSRSPLRHQAQVTFAEVGPIVLDAAVGAEVDRLVAAEGAAVFEGLVRRDVPGEVVRIRVEVGPEQVRVLAEP 1908
            GVGEGGKAFVEGASKALAVNRER+MGWMKELRPKDWSPK+A    E ES+QELRRAVRR+YLDAPDPA+HTA++VARARP APK    A +  ++       AAAVG  A    E G     VDRVIGTGAD++LT+LVWFRSS+GGGFAEIKGV+GP+YQPSADD+G RICIKCTLAG AL+LGGTG    LSP   GK RRGRH R          SRSP R Q QV+FAEVGPIVLD+AVGAEVD+L++A+G AVF GLVRRD PGE VR+RVEVG EQ+RV+A+P
Sbjct:  332 GVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAERAVEEESIQELRRAVRRLYLDAPDPAIHTAIIVARARPSAPKSAAAAAEXXAEGPTAEEAAAAVGEVAETPKEAGA----VDRVIGTGADKRLTKLVWFRSSSGGGFAEIKGVEGPFYQPSADDLGSRICIKCTLAGTALNLGGTGSGGFLSPTNRGKERRGRHGR----XXXXXXSRSPQRQQDQVSFAEVGPIVLDSAVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAQP 612          
BLAST of mRNA_L-elsbetiae_contig7223.16077.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 4.500e-76
Identity = 154/247 (62.35%), Postives = 172/247 (69.64%), Query Frame = 3
Query:   30 MAEERDDTGISPGISEDEDSDDEVSLLVVDEDELQTALDAAGISIEVDAEGGAVELRVLSEDVSTFIMFTPEEEYLGAKVTGFVPREDGGLSALEMHGQLVEGDVLTHLNGSNARLLDFSDILKACRGPDRGGLPRPLVMKFSRPETLPAPASPSPPASP--AAGRGEIGASKAADGGVGA----------GASSLLADLDDFMGGLSLPGFASGVAAGGADSATPAAAATPAEEPRRATGMSHIKG 734
            M + + + G+ P +  D+DSDDEVSLLVVDEDEL T L+ AGI ++VDAEG +VE+ VLSEDVSTF+MF PEEEYLGAKVTGFVPREDGGLSALEMHGQL+EGDVLTHLNGSNARLLDF+DILKACRGPDRGGLPRPLVMKFSR E L  PASP+P       A RG+  A  +                 GASSLLADLDDFMGGLSLPG  +                       R  GMSHIKG
Sbjct:    1 MEDGKGNVGMDPDM--DDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAPXXXXXXTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPGGEA-----------------------RIPGMSHIKG 222          
BLAST of mRNA_L-elsbetiae_contig7223.16077.1 vs. uniprot
Match: D7FUZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ4_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 7.690e-51
Identity = 109/155 (70.32%), Postives = 123/155 (79.35%), Query Frame = 1
Query: 1456 LTQLVWFRSSTGGGFAEIKGVDGPYYQPSADDVGMRICIKCTLAGAALSLGGTGG---LSPV-GGKGRRGRHARGGRRGGSRTPSRSPLRHQAQVTFAEVGPIVLDAAVGAEVDRLVAAEGAAVFEGLVRRDVPGEVVRIRVEVGPEQVRVLAEP 1908
            +  LVWFRSS+GGGFAEIKGV+GPYYQPSADD+G RICIKCTLAG AL+ GGTG    LSP  GGKGRR     GG R GSR    SP R Q QV+FAE GPIVLD+ VGAEVD+L++A+G AVF GLVRRD PGE VR+RVEVG EQ+RV+AEP
Sbjct:    8 VAALVWFRSSSGGGFAEIKGVEGPYYQPSADDLGSRICIKCTLAGTALNFGGTGSGGFLSPTNGGKGRRXXXXXGGGRSGSR----SPQRQQDQVSFAEGGPIVLDSPVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAEP 158          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7223.16077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE2.900e-10369.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI4_ECTSI4.500e-7662.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUZ4_ECTSI7.690e-5170.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7223contigL-elsbetiae_contig7223:2773..9062 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_008780.1
Exons11
Model size2136
Cds size1161
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.3930037-UTR-L-elsbetiae_contig7223:2772..30211622816804.3930037-UTR-L-elsbetiae_contig7223:2772..3021Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 2773..3021 -
1691683826.108913-UTR-L-elsbetiae_contig7223:2772..30211691683826.108913-UTR-L-elsbetiae_contig7223:2772..3021Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 2773..3021 -
1622816804.4064507-UTR-L-elsbetiae_contig7223:3757..39041622816804.4064507-UTR-L-elsbetiae_contig7223:3757..3904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 3758..3904 -
1691683826.120279-UTR-L-elsbetiae_contig7223:3757..39041691683826.120279-UTR-L-elsbetiae_contig7223:3757..3904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 3758..3904 -
1622816804.422033-UTR-L-elsbetiae_contig7223:4382..46581622816804.422033-UTR-L-elsbetiae_contig7223:4382..4658Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 4383..4658 -
1691683826.1366518-UTR-L-elsbetiae_contig7223:4382..46581691683826.1366518-UTR-L-elsbetiae_contig7223:4382..4658Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 4383..4658 -
1622816804.432732-UTR-L-elsbetiae_contig7223:5346..56031622816804.432732-UTR-L-elsbetiae_contig7223:5346..5603Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 5347..5603 -
1691683826.1502364-UTR-L-elsbetiae_contig7223:5346..56031691683826.1502364-UTR-L-elsbetiae_contig7223:5346..5603Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 5347..5603 -
1622816804.444336-UTR-L-elsbetiae_contig7223:5908..59251622816804.444336-UTR-L-elsbetiae_contig7223:5908..5925Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 5909..5925 -
1691683826.1712697-UTR-L-elsbetiae_contig7223:5908..59251691683826.1712697-UTR-L-elsbetiae_contig7223:5908..5925Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 5909..5925 -
1622816804.5467572-UTR-L-elsbetiae_contig7223:9033..90621622816804.5467572-UTR-L-elsbetiae_contig7223:9033..9062Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 9034..9062 -
1691683826.2534657-UTR-L-elsbetiae_contig7223:9033..90621691683826.2534657-UTR-L-elsbetiae_contig7223:9033..9062Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7223 9034..9062 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.4549022-CDS-L-elsbetiae_contig7223:5925..60411622816804.4549022-CDS-L-elsbetiae_contig7223:5925..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 5926..6041 -
1691683826.1842158-CDS-L-elsbetiae_contig7223:5925..60411691683826.1842158-CDS-L-elsbetiae_contig7223:5925..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 5926..6041 -
1622816804.4669864-CDS-L-elsbetiae_contig7223:6136..64791622816804.4669864-CDS-L-elsbetiae_contig7223:6136..6479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 6137..6479 -
1691683826.1948524-CDS-L-elsbetiae_contig7223:6136..64791691683826.1948524-CDS-L-elsbetiae_contig7223:6136..6479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 6137..6479 -
1622816804.4799654-CDS-L-elsbetiae_contig7223:6714..67831622816804.4799654-CDS-L-elsbetiae_contig7223:6714..6783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 6715..6783 -
1691683826.203989-CDS-L-elsbetiae_contig7223:6714..67831691683826.203989-CDS-L-elsbetiae_contig7223:6714..6783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 6715..6783 -
1622816804.4947102-CDS-L-elsbetiae_contig7223:7226..74281622816804.4947102-CDS-L-elsbetiae_contig7223:7226..7428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 7227..7428 -
1691683826.2150624-CDS-L-elsbetiae_contig7223:7226..74281691683826.2150624-CDS-L-elsbetiae_contig7223:7226..7428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 7227..7428 -
1622816804.508663-CDS-L-elsbetiae_contig7223:7840..79741622816804.508663-CDS-L-elsbetiae_contig7223:7840..7974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 7841..7974 -
1691683826.2256844-CDS-L-elsbetiae_contig7223:7840..79741691683826.2256844-CDS-L-elsbetiae_contig7223:7840..7974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 7841..7974 -
1622816804.5215967-CDS-L-elsbetiae_contig7223:8393..85521622816804.5215967-CDS-L-elsbetiae_contig7223:8393..8552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 8394..8552 -
1691683826.2358966-CDS-L-elsbetiae_contig7223:8393..85521691683826.2358966-CDS-L-elsbetiae_contig7223:8393..8552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 8394..8552 -
1622816804.5349834-CDS-L-elsbetiae_contig7223:8895..90331622816804.5349834-CDS-L-elsbetiae_contig7223:8895..9033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 8896..9033 -
1691683826.2447755-CDS-L-elsbetiae_contig7223:8895..90331691683826.2447755-CDS-L-elsbetiae_contig7223:8895..9033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7223 8896..9033 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7223.16077.1prot_L-elsbetiae_contig7223.16077.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7223 5926..9033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7223.16077.1

>prot_L-elsbetiae_contig7223.16077.1 ID=prot_L-elsbetiae_contig7223.16077.1|Name=mRNA_L-elsbetiae_contig7223.16077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
MAEERDDTGISPGISEDEDSDDEVSLLVVDEDELQTALDAAGISIEVDAE
GGAVELRVLSEDVSTFIMFTPEEEYLGAKVTGFVPREDGGLSALEMHGQL
VEGDVLTHLNGSNARLLDFSDILKACRGPDRGGLPRPLVMKFSRPETLPA
PASPSPPASPAAGRGEIGASKAADGGVGAGASSLLADLDDFMGGLSLPGF
ASGVAAGGADSATPAAAATPAEEPRRATGMSHIKGVLRAELQAQGMLGGG
GGGEEGDAGGEGGNGNTSPQGEGIFLNMLRRLEQVDVMGEDSPRAAAAAA
AAAASAVPENSAGGTDGDAGDCGEEAGGRAGAAAAAAAGGVGSSFAGVGR
GGGREGFCGGGFESSGGEPREGDGLDEGAEAQGLVP*
back to top

mRNA from alignment at L-elsbetiae_contig7223:2773..9062-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7223.16077.1 ID=mRNA_L-elsbetiae_contig7223.16077.1|Name=mRNA_L-elsbetiae_contig7223.16077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6290bp|location=Sequence derived from alignment at L-elsbetiae_contig7223:2773..9062- (Laminarionema elsbetiae ELsaHSoW15)
GGCCGAACCGCTGCTACTCGCGCTGCTGGATGGCTGAAGAAAGGGACGAC ACGGGAATCAGCCCTGGCATCTCGGAGGACGAAGATTCTGACGATGAGGT GTCTTTATTGGTTGTCGACGAGGATGAGCTTCAAACAGCACTCGACGCTG CGGGCATCTCCATCGAGGTACAAGCAAGATGCTTCAGTAGTAGCGCGCCG ACGACAGCTCACACATATGATGCTTTGTACCAGGACATTCGGAGAGTCGA ACTGTCTCTTCGTTGACTCCCGCCATCTGTGGTGATGTATCGATTTCTCC TTCGTTGTGAAGTAAGTGTGCAGAGACAAGAGACAGAGAATGGCACGTTT GAGAATAAAAAGAGACCGCGCGGCTGTACAATATCAGAACGAAGGAACGC GTTCCGAGAATGGACATGCCGCTACATACATACATGTGTGATATAGGAGT GCATTTCTGCTACACGCCAATGTCCCTCCCTCCTGCCCCCCCCCCCCCCC CCTGCACCAGGTGGATGCAGAAGGTGGTGCCGTGGAACTGCGCGTTTTAA GCGAGGATGTCTCGACCTTTATCATGTTTACCCCCGAGGAGGAGTACCTG GGCGCGAAGGTAACGGGCTTCGTGCCGCGGGAGGACGGCGGACTCAGCGC CCTCGAAATGCATGGCCAGGTGAATACATATGGTGTGCAGGGCGGCCACA CTTGAGCGGGTCTGCTCACGGCCGAATTGCGTTCCTAGTCGGCTCAGGAC GCACGCATTGAGAGCAGCACCGGCCGCTAGCGAGGGTAGGTGGCATTCCT ATTCAAATCAGCATCTCCATGGGCACTCTCGGCGTACGTGCGGAAACGCC TCGTCCGGTTTATTTTTTTGTATGCTCAAAAACTGCAAAACCTTGGTGTG TATTGCAGTCTAGACATACTAGAGAAAACTCTCTTCATGATGTGCCTTAC TGCTGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCCGTTGCAAGAG CAAAGCATTTGCTTCACGGCCGGCTCTTCCCTTCATTTTTGTGTTGCCTG GCCTCTTGACCCTGATCAAATTATCACATACATACAAGCTCGTGGAGGGC GACGTGCTCACGCACCTCAACGGGAGCAACGCTCGCCTCCTGGACTTCTC CGACATCCTCAAGGCCTGCAGGGGGCCGGATAGGGGCGGCCTCCCTCGCC CTCTCGTCATGAAGTTTTCCAGGTCAGCAAACAACGGACCGGGTGTGGCT AGAGACAGCGTTGCGCGGGGGTGCGCATGCGGGCGTGTACAAGGGATATC TGTGCGCGTGTACAGTGTCAGCAGCAGCAGCAGCGTTGTGAAGCAGATGC GTGCCAATTGCGGAGGAAGGGTACATTTTCCCCCCGCGTGTCCCAACAAT TTATCAGGAGCCATTTCTTGCCTTGGCGCGTTGTTTAGGTTTTGCCCATC CTCGACCAAAACGCACGAGCAGCTGTTAGCACCGTCCGTGTGTGTAGTAT GGTACCTCTTACGGCCACCCCCGAAGCCTTTCCCCTCCCCCTCCATTGTG TTGCTTCCCTCCCGACCCTCTCTTGCCTTTCCGTCCCACCCAATCGCCGC CTGGCACACCTTCCCGGCCTGTCGGCGAGAGAAGGCCCGAAACGCTCCCG GCCCCGGCTTCCCCGTCTCCTCCCGCCTCGCCCGCCGCCGGGCGGGGAGA AATCGGCGCAAGCAAGGCCGCGGACGGGGGCGTTGGTGCCGGGGCGTCGT CGCTACTGGCAGACCTTGACGACTTCATGGGGGGGTTGAGCTTGCCGGGG TTCGCCTCCGGCGTGGCCGCGGGAGGTGCAGACTCGGTGAGCCAGGCGAA AAGACAGGCCCGAGGTTTTGCTGCTGTTCTTGCGAAAGGCTGCAGTGTGT CCGGTTGTTTTCGTTTGCCTGGTAATGCAACGGCGACGGAGACGGTGGCG GCGACAGCATTAAAGCGAATGAGCCAGGCGAAAAGACAGGCCCGAGGTTT TGCTGCTGTTCTTGCGAAAGGCTGCAGTGTGTCCGGTTGTTTTCGTTTGC CTGGTAATGCGACGGCGACGGAGACGGTGGCGGCGACAGCAGTAAAGCGA ATGCGAGTGTTTTGATGCGCCGGCCCTGTTGTGGTTTACGAGCACGCCCG GTGACAGGGAGGGCGGGTGCGCCTTTTGGAGGCTGTGTTCTCCCGCGGCA GGCGTCATGAGTCGTGCACTTTTGCTGATGTGGTGCTTTTGCGTCTCTCT CGTGTCGCGGCAATACTGCCTTGCAGCAGGCGACACCGGCGGCCGCGGCG ACACCGGCGGAGGAGCCGCGACGAGCGACTGGAATGTCGCACATCAAGGT GCGTGTTTTTCGTTGGTACATGCATCTGCATGTACGTACTTTCCAGCCCG TCTGTGCGCTTCCTCGCCGAGGCCACCACCGCGTGTTAAAGCTCTGAGAA CGAAAGGGTATTCTACTCTATGTAGCGTTCGTCTAGTCTCACCCAAGCCG CTCGCTCTCCGTGTCTTGAGATGCAATTTGAGGCAAACGGCACGCGCAAG ACAAATCCTCCGGCCGGCTCTTGTCCCTGTCAGGGGGTCTTGCGTGCCGA GCTCCAGGCCCAAGGCATGCTAGGAGGAGGAGGAGGAGGTGAGGAGGGAG ATGCCGGCGGCGAGGGTGGGAACGGGAACACCTCCCCGCAAGGAGAGGGT ATATTCCTGAATATGCTGCGTCGACTGGAGCAAGTCGACGTGATGGGAGA GGACAGCCCCCGGGCGGCAGCGGCAGCGGCGGCGGCGGCAGCCTCGGCGG TTCCCGAAAACAGCGCAGGAGGTACCGACGGAGATGCCGGAGACTGCGGC GAAGAAGCAGGCGGAAGAGCCGGGGCGGCGGCGGCGGCCGCGGCGGGGGG GGTCGGGTCATCGTTTGCCGGCGTGGGTGCCAAGCTCCGTTCCAAGTTTA GAAAGCCCGGCGGCGGGTTTGGGCTTGCTCAAGGCGGCGGCGGCCAGGCG GCGGGGGGCGGGGCTGCCGAGGGCGTGGGGGAGGGCGGGAAGGCTTTTGT GGAGGGGGCTTCGAAAGCTCTGGCGGTGAACCGCGAGAGGGTGATGGGCT GGATGAAGGAGCTGAGGCCCAAGGACTGGTCCCCTAAGGATGCGGGACCA GAAGGTCAGCGCGAGTTTGTACTATAATACATGTATGTTGGGCTCGACAG CTTCTGGGGTTGTGTCGGAGTTTAGGCTTTCTCTTGGTTTCACGGTGAAG ACCGTTTCTCCCCAGAACTACCACGGTCCATACCTATAATACCTCTCAAG AAGATCTCCCTTCGTTCCTAGCCTCCCCCCCCATCACGCTAGTTCCCATC TGCCGGTTGGCGTATCGGTTTTATCTTTTATGTTTGTACATATATGGCCG TCTCTTCGACGACCACGGCCCCAACACGATGTTTACCGACCAATCACGTG CGTCCACAGCGGAGGCAGAATCACTCCAAGAATTGCGCAGAGCGGTGCGG CGTATCTACCTCGATGCGCCCGATCCCGCCGTGCACACGGCCATGGTGGT GGCGCGCGCACGACCGCCGGCGCCGAAGCTGGGCGAGGTGGCGGAGGATG TGGGATCTGATGCGGCGGCGGTCGGCGGCAGTGCGGGAGCGGGGGCGGAG GTGGGAACGGCAGTCCGCGGGGTGGACCGGGTCATCGGCACGGGAGCGGA CAGGCAGCTTACCCAGGTAGGGCGGCCGTGCAGTAGTCAGCAGCACTGCA GTGTCGGGATATATTTTGATAAGAGAGAGAGGGAGAGGGGGGCGGGGGCG CGGGGGTGCTTGGGTGCAACACAAGCGGTTTCTTTTCGCGCGTGTGTCGG TTTTGGGCTTCGCAAGGATCAATGGTGTTGTTCACGGATGGCGGCCCGTC CGAAACGGCCCCGTGTCGGGCTGCTTCTGTCACCTTCATAGCGGCGGGGG GGGGGGGGGGGGCTCGCCCCCCCGGGCCCCCCCCAACGGGGCCTCGGGGC ACCGGCGGGCGGCGCATCCAGGGCCTCCACCCTCGNNNNNNNNNNGTGGG TGTGTGGGGGCGTGGGGCGGCGGCCCGGGCGGCGGGGGCCGGGGGGGGCT CCTTTCCCCCGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTCTGCAC CTGCCGATTGCGCCGAACCGGTGCTCGCGGCATTGCGTTGCTGCAACTGC AGTGCTTCCCCACTAGCTTGTCTTCCCCGTTTTCCTTTCCTCGAATGATG GTTCTCGCCCCCCGCCGAACCAAACCGCCTTGCATGGCGACGAAACCTCA CCTCCTGGCAACGAACGGCCTAAAACAAAACGTCAAGAACCCGCGCCGCG CGCCTCCGCCTCGACCAAAACCCTTGCCCCCCTCGAAAAAACAAACAAAA AAAGCTTGTTTGGTTCCGGTCTTCCACGGGCGGGGGCTTCGCGGAGATCA AAGGCGTTGACGGTCCGTACTACCAGCCCAGCGCCGACGACGTCGGCATG CGCATCTGCATCAAGTGCACGCTCGCGGGGGCCGCGCTCAGCTTGGGTGG TACCGGCGGTTTGTCGCCGGTGGGCGGGAAGGGGAGGCGCGGCCGTCATG CTCGCGGCGGCAGGAGAGGGGGGTCGCGAACGCCGTCACGGAGCCCCCTG CGGCACCAGGCTCAAGTCACGTTCGCCGAGGTGAGGGCGGGTGCCAGTTT CGGCGTGTTGATAGATATGTTTGTAGGTTTCGTTTTTGGGGGTGCAGTAG TGGTACAGAAGTGGTAGGGTTGCTCGCGGAGCGAGCCGCTTTGTTTTCTT CTCCGGTGTGTCCTGGTGCTTTGATTTCCACGCGGTTCCGCGTTCCTTCT CCTACCTCTAGCTTACTCTAAAATGGGCAGGCCTGTTGAAGCAGCAGGCA GAACAAAACGTTGTTTGTTGAACTGAGACTGCCTTTTACAGTTTCCACGC GATTTCGCGTTCCTTCTCCCGCCCTATGTAGCTTGCTTACTCTATAACGG GTCCCTTTTTTCAAAAGAAATCGATAAATCAAGGAGAGAACGTCCCAATA TTTGAGGTGAAACTTTTTTTCGATGGCCGGTCGGTGTCGGTGCCCCTACA ACATTCGCCCCCCCCCCCCCCCTCCCTATTTCATGCTGTGCTGCGGTGCC CCGAAAAGGTTGGCCCGATAGTCTTGGACGCCGCGGTGGGGGCGGAGGTG GACAGGCTTGTCGCGGCGGAGGGCGCTGCCGTGTTCGAGGGGCTCGTGAG GAGGGATGTCCCGGGCGAGGTCGTGCGCATTCGCGTCGAGGTTGGCCCAG AGCAGGTAACAATGCGCCGGGAGATCGTGTGCGTCTTGCTAACCCCTATT TGCACGACGCGCGCGTGCAAATAACAACGTGCACGTCTCGTGTCTGATTG GCCGAAGACCCGCCGCGCGGTTTTTGCACCAGCGCCAACTGAACGCGCGG CGAAGCCACGCAGAGGCGACTTTCGCACCCGATCACCCCAGAGATCACAC GTTTGGGTTGGGGTTAGGGTGAGGGGTGGGGTTGGGTCGGGAGCGGCATA AACTCGCAAAGTGTTGCCGCGACGCGTGCAAAAGAGGCGTTCGAAGCGTG CACGTCTTATTTGTACGCACGTCGTACAAAAAGGGGATGCCGTCTTGCTT GTGTTTGTGTGGTCGTCCATGATACCAACCCCGGGATTTTTTCGGCGGAG TACATACATACATACGTTCCCGCCGAATTTTGTTTTGTTTGGAAACAGAT ACTCCTAATTCGCAACTCGATGATACTTTGGGGATCTTAAGGCAGGCCTA AACTTCGACAGCTTCGCCGTCTGTGCGTCTTGTGTTGTTGGTATAGCGGC GGTCGTGGGATGTCAAGGCTCCAATCGGGCCGAGAGAAAAAGGCGTTGAT ACGACAGCATATTTATACATAAAAGTATGTAGCTGTTACGTTTTGCCGTC CATTTTTCCCCTTCGTTTGTGCTGATATATTCCACGGGTGCGCTTTTGCT CGTCGTGTTCCCGCGTGTACATTCCTGCCGGCGGTGAGCAGGTGCGAGTA CTGGCAGAGCCCAGCACGACGACGACAACAGACGCTACCACCCCGGTCAC CCCCGCGAGCAACAGCCACGGAGGGCTGAATGCCAGCAGCGGTGATGCTG CACAGCGGGCTGAGACCCCAGGTACCGCGGTGGCCGAACCGCCCTCGTCG ACAGCAACAGAAGTTGCCCCGAAAGGCGAGGCCGGGGCTGGTGAGGCAGA GGCGGGAGAGAACGACGGCGGAGTGCTGGTAGCAGAGGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7223:2773..9062-

>mRNA_L-elsbetiae_contig7223.16077.1 ID=mRNA_L-elsbetiae_contig7223.16077.1|Name=mRNA_L-elsbetiae_contig7223.16077.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig7223:2773..9062- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGAAGAAAGGGACGACACGGGAATCAGCCCTGGCATCTCGGAGGA
CGAAGATTCTGACGATGAGGTGTCTTTATTGGTTGTCGACGAGGATGAGC
TTCAAACAGCACTCGACGCTGCGGGCATCTCCATCGAGATGGCTGAAGAA
AGGGACGACACGGGAATCAGCCCTGGCATCTCGGAGGACGAAGATTCTGA
CGATGAGGTGTCTTTATTGGTTGTCGACGAGGATGAGCTTCAAACAGCAC
TCGACGCTGCGGGCATCTCCATCGAGGTGGATGCAGAAGGTGGTGCCGTG
GAACTGCGCGTTTTAAGCGAGGATGTCTCGACCTTTATCATGTTTACCCC
CGAGGAGGAGTACCTGGGCGCGAAGGTAACGGGCTTCGTGCCGCGGGAGG
ACGGCGGACTCAGCGCCCTCGAAATGCATGGCCAGGTGGATGCAGAAGGT
GGTGCCGTGGAACTGCGCGTTTTAAGCGAGGATGTCTCGACCTTTATCAT
GTTTACCCCCGAGGAGGAGTACCTGGGCGCGAAGGTAACGGGCTTCGTGC
CGCGGGAGGACGGCGGACTCAGCGCCCTCGAAATGCATGGCCAGCTCGTG
GAGGGCGACGTGCTCACGCACCTCAACGGGAGCAACGCTCGCCTCCTGGA
CTTCTCCGACATCCTCAAGGCCTGCAGGGGGCCGGATAGGGGCGGCCTCC
CTCGCCCTCTCGTCATGAAGTTTTCCAGCTCGTGGAGGGCGACGTGCTCA
CGCACCTCAACGGGAGCAACGCTCGCCTCCTGGACTTCTCCGACATCCTC
AAGGCCTGCAGGGGGCCGGATAGGGGCGGCCTCCCTCGCCCTCTCGTCAT
GAAGTTTTCCAGGCCCGAAACGCTCCCGGCCCCGGCTTCCCCGTCTCCTC
CCGCCTCGCCCGCCGCCGGGCGGGGAGAAATCGGCGCAAGCAAGGCCGCG
GACGGGGGCGTTGGTGCCGGGGCGTCGTCGCTACTGGCAGACCTTGACGA
CTTCATGGGGGGGTTGAGCTTGCCGGGGTTCGCCTCCGGCGTGGCCGCGG
GAGGTGCAGACTCGGCCCGAAACGCTCCCGGCCCCGGCTTCCCCGTCTCC
TCCCGCCTCGCCCGCCGCCGGGCGGGGAGAAATCGGCGCAAGCAAGGCCG
CGGACGGGGGCGTTGGTGCCGGGGCGTCGTCGCTACTGGCAGACCTTGAC
GACTTCATGGGGGGGTTGAGCTTGCCGGGGTTCGCCTCCGGCGTGGCCGC
GGGAGGTGCAGACTCGGCGACACCGGCGGCCGCGGCGACACCGGCGGAGG
AGCCGCGACGAGCGACTGGAATGTCGCACATCAAGGCGACACCGGCGGCC
GCGGCGACACCGGCGGAGGAGCCGCGACGAGCGACTGGAATGTCGCACAT
CAAGGGGGTCTTGCGTGCCGAGCTCCAGGCCCAAGGCATGCTAGGAGGAG
GAGGAGGAGGTGAGGAGGGAGATGCCGGCGGCGAGGGTGGGAACGGGAAC
ACCTCCCCGCAAGGAGAGGGTATATTCCTGAATATGCTGCGTCGACTGGA
GCAAGTCGACGTGATGGGAGAGGACAGCCCCCGGGCGGCAGCGGCAGCGG
CGGCGGCGGCAGCCTCGGCGGTTCCCGAAAACAGCGCAGGAGGTACCGAC
GGAGATGCCGGAGACTGCGGCGAAGAAGCAGGCGGAAGAGCCGGGGCGGC
GGCGGCGGCCGCGGCGGGGGGGGTCGGGTCATCGTTTGCCGGCGTGGGGG
GTCTTGCGTGCCGAGCTCCAGGCCCAAGGCATGCTAGGAGGAGGAGGAGG
AGGTGAGGAGGGAGATGCCGGCGGCGAGGGTGGGAACGGGAACACCTCCC
CGCAAGGAGAGGGTATATTCCTGAATATGCTGCGTCGACTGGAGCAAGTC
GACGTGATGGGAGAGGACAGCCCCCGGGCGGCAGCGGCAGCGGCGGCGGC
GGCAGCCTCGGCGGTTCCCGAAAACAGCGCAGGAGGTACCGACGGAGATG
CCGGAGACTGCGGCGAAGAAGCAGGCGGAAGAGCCGGGGCGGCGGCGGCG
GCCGCGGCGGGGGGGGTCGGGTCATCGTTTGCCGGCGTGGGGCGTGGGGG
AGGGCGGGAAGGCTTTTGTGGAGGGGGCTTCGAAAGCTCTGGCGGTGAAC
CGCGAGAGGGTGATGGGCTGGATGAAGGAGCTGAGGCCCAAGGACTGGTC
CCCTAAGGCGTGGGGGAGGGCGGGAAGGCTTTTGTGGAGGGGGCTTCGAA
AGCTCTGGCGGTGAACCGCGAGAGGGTGATGGGCTGGATGAAGGAGCTGA
GGCCCAAGGACTGGTCCCCTAA
back to top