mRNA_L-elsbetiae_contig7207.16055.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 321 bits (822), Expect = 4.690e-99 Identity = 220/490 (44.90%), Postives = 273/490 (55.71%), Query Frame = 3 Query: 366 PWRREGVHGRYLDRRQSNIHANLAGLPVFSSGLSCSSDGFNYFSLSGKKLSVNATYVGLGCLSPALLRRLRSWHLASLRLPGAAWELDVKPLMKIISLLQRECRAEIATGDRQTITGVGKDGVAHAKP*FANAQLLDKHQALQRQDCTPLPSLQDSPEGSRQSERGFVKNPSNG*WPTTGSRHGGERYKRETHSAVPG*GSRAGQLPEPPRLGRLRSSGSDWDRHASPVTNPYYCIQGPVL*SQCIYYGRLRRIDKDPLFSFESPSLLGANPVLSVTCLSKF*LSSVKSLSR*LRCLLPRLDECITLLQRIDEPPIPYRVLYLNHTVSSQAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASPLGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMALVMQLTSG 1835 PWR++G HG + DRR S +HANL GLPVFS+GL+CSSD FNYFSLSGK+ SVNAT+VGLGCLSPALLRRLRSWHLA+L LPGAAWELDV PLMKII LLQ C+AEIA GD+QTIT + + G+ A LD +P+ SL W T +H H+A RA Q PR + NP Y I + S G L++ + +K +SR L ++PR +DE RV V Q+ALNA +KIM++V++AL S G+ ++R RFA R +LPP SP+ DITSAG W+ALTGQ+LW+VSSIFPFL APIF+ L VRA VV++VA I ++ T GKA VC AF+ L+KA SWSSF VRSPSF+ EGL+ L KS DQVKQ+ VM + G Sbjct: 3 PWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTAN--------LD----------SPMHSL----------------------W--TNQKH---------HNAKT---ERACQACTVPR---------------KDLGNPRYDIVK------------------------NARSADGLREDLALVASIEKRQEQLK-MSRALGVVVPRYPN------PLDEVTFD-RVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALG 391
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.030e-56 Identity = 111/214 (51.87%), Postives = 143/214 (66.82%), Query Frame = 3 Query: 87 DGHLVVVENRLLSVQTLGAAFKVGRTRGDRAPPEFVWELCKSPQEIRVRDIEGLCSVVQPG--AVVPEEEVYSTYTAMGFVGKRPGHAAYEKVRQPWRREGVHGRYLDRRQSNIHANLAGLPVFSSGLSCSSDGFNYFSLSGKKLSVNATYVGLGCLSPALLRRLRSWHLASLRLPGAAWELDVKPLMKIISLLQRECRAEIATGDRQTITGVG 722 +GHLVV NRLLS + +G +F R R ++ E +WEL P EIRV + G CSV+ PG + + + Y GFV + P PW ++G HGR+ D+R S +H NLAGLPV S+G++CSSD FNYFSLSG+K SVNAT+VG GC+SP LLRR R W+LA+L LPGAAWELD+ PLMKII LQ C+AEI+ G + T+T +G Sbjct: 396 EGHLVVRINRLLSRREVGHSFATKRRREEKY--EQLWELTNDPLEIRVGAMSGRCSVLVPGDTSEPSDGDAVPAYDGEGFVEQIPRTNELRLAMAPWTKQGYHGRFFDQRASGVHKNLAGLPVISAGIACSSDDFNYFSLSGRKYSVNATFVGCGCMSPTLLRRPRPWYLATLGLPGAAWELDILPLMKIIRRLQNGCKAEISVGTKLTVTIMG 607
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 172 bits (437), Expect = 4.270e-44 Identity = 95/164 (57.93%), Postives = 120/164 (73.17%), Query Frame = 3 Query: 1344 VSSQAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASPLGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMALVMQLTSG 1835 V Q+ALNA +KIM++V++AL S G+ ++R RFA R +LPP SP+ DITSAG W+ALTGQ+LW+VSSIFPFL APIF+ L VRA VV++VA I ++ T GKA VC AF+ L+KA SWSSF VRSPSF+ EGL+ L KS DQVKQ+ VM + G Sbjct: 123 VLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALG 286
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 4.230e-41 Identity = 91/161 (56.52%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 1353 QAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASPLGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMALVMQLTSG 1835 Q+ALN+ +KIM +V++AL G+ ++RARFA +LPP SP+ DITSAG WSALTGQ+LW+VSS FPFL APIF+ ++L R VR VV++VA I D T GKA VC AF+ L+KA SWS F VRSPSF+ EGL+ L KS +QVKQ VM + G Sbjct: 137 QSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALG 297
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 157 bits (398), Expect = 5.780e-40 Identity = 91/164 (55.49%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 1350 SQAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASPLGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQV--KQMALVMQLTSG 1835 +Q+ALNA +KIM++V++AL S + ++R RFA R +LP P+ DITSAG W+ALTGQ+LW+VSSIFPFL APIF+ L VRA VV++VA I ++ T GKA VC AF+ L+KA SWSSF VRSPSF+ EGL L KS DQV KQ+ VM + G Sbjct: 6 TQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALG 169
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 9.920e-31 Identity = 60/82 (73.17%), Postives = 71/82 (86.59%), Query Frame = 3 Query: 468 CSSDGFNYFSLSGKKLSVNATYVGLGCLSPALLRRLRSWHLASLRLPGAAWELDVKPLMKIISLLQRECRAEIATGDRQTIT 713 CSSD FNYFSLSG+K SV+AT+VGLGCLSP LLRRLRSW+LA+L LPGAAWELD+ PLM+II LQ C+ EI+ GD+QT+T Sbjct: 59 CSSDAFNYFSLSGRKHSVSATFVGLGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGDKQTVT 140
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 132 bits (332), Expect = 4.460e-29 Identity = 89/210 (42.38%), Postives = 121/210 (57.62%), Query Frame = 3 Query: 1206 KF*LSSVKSLSR*LRCLLPRLDECITLLQRIDEPPIPYRVLYLNHTVSSQAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASPLGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMALVMQLTSG 1835 K+ + + LSR L ++PR +DE RV + Q+ALN+ +KIM +V++AL G+ ++ DITSAG SALTGQ+LW+VSSI PFL APIF+ ++L R VR VV++VA I + T GKA VC AF+ L+KA SWS F VRSPSF+ EGL +L KS ++QVKQ V+ + G Sbjct: 33 KYDIKDREKLSRALGVVVPRYPN------PLDEVAFD-RVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALG 218
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 114 bits (285), Expect = 9.670e-25 Identity = 62/109 (56.88%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 715 ALVRMGLLTPNLDSPMHSCWTNTKHCNAKTARPCQVCKIHLKDLGNPNVDLSKIRRTADGLRQDLATVANATRGR-RTALSLAKGVVPGNFPNPLDLVVFDRVDQIGID 1038 ALVR+GLLT NLDSPMHS W N KH NAKT CQ C + +DLGNP D+ K RTADGL++DL VA + + R LS A GVV +PNPL V DRVD G+D Sbjct: 22 ALVRLGLLTANLDSPMHSLWANQKHHNAKTT--CQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMD 128
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 6.250e-6 Identity = 44/155 (28.39%), Postives = 76/155 (49.03%), Query Frame = 3 Query: 1353 QAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASP-LGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMAL 1814 Q A N+LRKI ++ L L + AK L +P L D S G +SAL+G ++W +SS+ + P+ S+ R A + + A +G T V +V + R L+ A S ++ +RS SF+ E + + +S +++ Q ++ Sbjct: 293 QDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSI 447
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 3.460e-5 Identity = 44/159 (27.67%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 1344 VSSQAALNALRKIMSWVIEALLSDGAAVLRARFAKRALLPPTASP-LGDITSAGCWSALTGQELWMVSSIFPFLEAPIFADTESLYRNVRASVVSQVAANIGKDATTAVGKADVCKAFRTLMKAMSWSSFAVRSPSFSPEGLQILHKSMKDQVKQMALV 1817 V Q A N+L KI ++ L L + AK L +P L D S G +SAL+G ++W +SS+ + P+ S+ R A + + A +G T V +V + R L+ A S ++ +RS SF+ E + + + +++V M+++ Sbjct: 582 VFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLMSML 740 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7207.16055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7207.16055.1 >prot_L-elsbetiae_contig7207.16055.1 ID=prot_L-elsbetiae_contig7207.16055.1|Name=mRNA_L-elsbetiae_contig7207.16055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MRLRSGGSEAAGDLQGDGHLVVVENRLLSVQTLGAAFKVGRTRGDRAPPEback to top mRNA from alignment at L-elsbetiae_contig7207:3570..6666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7207.16055.1 ID=mRNA_L-elsbetiae_contig7207.16055.1|Name=mRNA_L-elsbetiae_contig7207.16055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3097bp|location=Sequence derived from alignment at L-elsbetiae_contig7207:3570..6666+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7207:3570..6666+ >mRNA_L-elsbetiae_contig7207.16055.1 ID=mRNA_L-elsbetiae_contig7207.16055.1|Name=mRNA_L-elsbetiae_contig7207.16055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig7207:3570..6666+ (Laminarionema elsbetiae ELsaHSoW15)back to top |