mRNA_L-elsbetiae_contig7205.16053.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A6H5LCE7_9PHAE (V-ATPase_H_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE7_9PHAE) HSP 1 Score: 217 bits (552), Expect = 2.800e-66 Identity = 103/109 (94.50%), Postives = 108/109 (99.08%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +VMSGQLKWGPVHTEKFWREQARKFEADEFF+LKQLIELLKSEDK VVSIACYDLGEFVRFYPSGKTIVKHLGAKER+MLLVDSEHKD+QRHALQCVSKIMV+KWEFIR Sbjct: 413 EVMSGQLKWGPVHTEKFWREQARKFEADEFFILKQLIELLKSEDKSVVSIACYDLGEFVRFYPSGKTIVKHLGAKERLMLLVDSEHKDIQRHALQCVSKIMVNKWEFIR 521
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: F0XWY7_AURAN (V-ATPase_H_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY7_AURAN) HSP 1 Score: 149 bits (376), Expect = 1.590e-44 Identity = 68/107 (63.55%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSE-DKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWE 321 +V SG L WG VHT+KFWRE AR EAD+F ++K L++LL + D VVSIACYD+GEFVRFYP+GK +VKHLGAK+++M L+D E ++QRHALQCVSKI+V+ WE Sbjct: 9 EVRSGDLAWGLVHTDKFWRENARAAEADDFALIKLLVQLLDGDRDPTVVSIACYDVGEFVRFYPNGKAVVKHLGAKDKIMALIDHEDPEIQRHALQCVSKILVTNWE 115
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: D7FH73_ECTSI (V-ATPase_H_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH73_ECTSI) HSP 1 Score: 147 bits (372), Expect = 3.210e-44 Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 1 Query: 7 VMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAK 228 VMSG LKWGPVHTEKFWREQARKFEADEFF+LKQLIELLKSEDK VVSIACYDLGEFVRFYPSGKTIVKHLG++ Sbjct: 3 VMSGHLKWGPVHTEKFWREQARKFEADEFFILKQLIELLKSEDKSVVSIACYDLGEFVRFYPSGKTIVKHLGSR 76
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A835Z9Q6_9STRA (V-type H+-transporting ATPase 54 kd subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q6_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.320e-43 Identity = 72/109 (66.06%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V SG+L+WG VHTE+FWRE AR EAD+F +++ LI LL+SED+ VV+IACYDLGEFVRFYP+GK I+KHLGAK VM LV+ + +V+R ALQCVSK+MV+KWEF+R Sbjct: 350 EVRSGRLRWGVVHTERFWRENARATEADDFALIRALIGLLRSEDETVVAIACYDLGEFVRFYPTGKAILKHLGAKPTVMALVEHANPEVRRQALQCVSKLMVNKWEFVR 458
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A7S2H8Z8_9STRA (V-type proton ATPase subunit H n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H8Z8_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.610e-43 Identity = 75/110 (68.18%), Postives = 94/110 (85.45%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLV-DSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V S QLKWG VH EKFWRE A++ E +EF +LK+LIELL+S+D +VVS+ACYDLGEFVRFYP+GK+IVK+LGAK+ VM + D E +VQRHALQC+SKIMV+KWEF+R Sbjct: 341 EVKSKQLKWGLVHQEKFWRENAKELEVNEFALLKELIELLRSDDPEVVSVACYDLGEFVRFYPNGKSIVKNLGAKDLVMGKIGDKEPPEVQRHALQCMSKIMVNKWEFMR 450
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A7S2SKW2_9STRA (V-type proton ATPase subunit H n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKW2_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.180e-42 Identity = 74/110 (67.27%), Postives = 92/110 (83.64%), Query Frame = 1 Query: 4 QVMSGQLKWGP-VHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +VMS +LKWG VH EKFWRE AR E ++F +LK LI LLKSED +VVS+ACYDLGEFVRFYP+G++IVK+LGAK+ VML ++ E +VQRHALQC+SKIMV+ WEF+R Sbjct: 334 EVMSRRLKWGSLVHEEKFWRENARCLEDNDFELLKALIGLLKSEDNEVVSVACYDLGEFVRFYPNGRSIVKNLGAKDLVMLKINDEEPEVQRHALQCMSKIMVNHWEFMR 443
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: I2CP76_NANGC (V-type proton ATPase subunit H n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP76_NANGC) HSP 1 Score: 144 bits (363), Expect = 5.080e-39 Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V SGQL+WG VH+EKFW+E R EAD+F VLK LI LL SED++VV+IACYD+GEF RFYP+G++IVK GAK++ M L++ +V R+ALQCVSKIMV W IR Sbjct: 335 EVASGQLRWGIVHSEKFWKENVRSLEADDFKVLKSLISLLASEDEEVVAIACYDIGEFARFYPNGRSIVKLFGAKDKAMHLIEHPSPEVSRYALQCVSKIMVVNWAHIR 443
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A1E7FC18_9STRA (ARM repeat-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FC18_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.760e-38 Identity = 66/111 (59.46%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADE--FFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V G L+WG HTE F++E A+ FE + FF+LK LI LL S+D++VV+IACYD+GEFVRFYP+G++I K LGAKE VM L++S++ D+QRHALQCVSKIMV WE+++ Sbjct: 404 EVEKGHLQWGSTHTEAFFKENAKMFEGSDGDFFLLKVLITLLSSKDEEVVAIACYDIGEFVRFYPNGRSITKRLGAKELVMPLIESDNVDLQRHALQCVSKIMVQNWEYVK 514
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A7S2V6V1_9STRA (V-type proton ATPase subunit H n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6V1_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.160e-38 Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKH--LGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V SGQLKWG HTEKFWR R EAD+F +LKQL ELL S D++VVSIACYD+GEFVRFYP+GK++V K ++M L++S + +VQR ALQ VSKIMV KWEF++ Sbjct: 353 EVRSGQLKWGLCHTEKFWRNNVRSMEADDFALLKQLGELLGSADEEVVSIACYDIGEFVRFYPNGKSLVNQSQFNLKTKIMALIESPNTNVQRQALQAVSKIMVQKWEFVK 463
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Match: A0A7S0ATY0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATY0_9STRA) HSP 1 Score: 134 bits (336), Expect = 7.790e-38 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 4 QVMSGQLKWGPVHTEKFWREQARKFEADE--FFVLKQLIELLKSEDKQVVSIACYDLGEFVRFYPSGKTIVKHLGAKERVMLLVDSEHKDVQRHALQCVSKIMVSKWEFIR 330 +V SG L+WG HTE F++E AR E + F +LK LI LL S+D++V SIAC+D+GEFVR+YP+G+ I K LGAKE VM L++ ++ D+QRHALQCVSKIMV WEF++ Sbjct: 49 EVESGHLQWGTCHTEAFFKENARMVEGTDGDFRLLKVLIALLSSKDEEVASIACHDIGEFVRYYPNGRAIAKRLGAKELVMPLIEHDNVDLQRHALQCVSKIMVQHWEFVK 159 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7205.16053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7205.16053.1 >prot_L-elsbetiae_contig7205.16053.1 ID=prot_L-elsbetiae_contig7205.16053.1|Name=mRNA_L-elsbetiae_contig7205.16053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp MSGQLKWGPVHTEKFWREQARKFEADEFFVLKQLIELLKSEDKQVVSIACback to top mRNA from alignment at L-elsbetiae_contig7205:4917..6431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7205.16053.1 ID=mRNA_L-elsbetiae_contig7205.16053.1|Name=mRNA_L-elsbetiae_contig7205.16053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1515bp|location=Sequence derived from alignment at L-elsbetiae_contig7205:4917..6431+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7205:4917..6431+ >mRNA_L-elsbetiae_contig7205.16053.1 ID=mRNA_L-elsbetiae_contig7205.16053.1|Name=mRNA_L-elsbetiae_contig7205.16053.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig7205:4917..6431+ (Laminarionema elsbetiae ELsaHSoW15)back to top |