mRNA_L-elsbetiae_contig7177.16011.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7177.16011.1
Unique NamemRNA_L-elsbetiae_contig7177.16011.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: D7G1E7_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E7_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 8.470e-125
Identity = 185/249 (74.30%), Postives = 205/249 (82.33%), Query Frame = 1 
Query:    1 MFRRRQFQPKMTAS-ATSGCSSTLRGSNEADSREDGSRDLAVGFQFQEVGIVTNRAKNPVVYLDVSIGGSAARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQL----RKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYIQA 732
            MFRRRQF  K TAS +  G + TLR + E ++ E   RD AVGFQF+EVG + NRAKNPVV+LDVSIGG  ARLTFELRKDIVPRTAENFRSIC+GDR +T DGTRLSYQGCVFHRVIKDFAVIGGDIA        +F LS+P +   ++     ++HDGTGRASIYGG FADENFVLRH GPGVLTCCNAGPDTNSS FMITTVEAPWLNGRSVAFGCLANAESF+AL+K+EACG EGGRPSVYIQA
Sbjct:    1 MFRRRQFHTKPTASDSLVGGAKTLRDTKEEENEEKEGRDRAVGFQFKEVGTLANRAKNPVVFLDVSIGGVPARLTFELRKDIVPRTAENFRSICAGDRADTQDGTRLSYQGCVFHRVIKDFAVIGGDIASDTTDKQKTFALSKPTKESTAERWRSSKRHDGTGRASIYGGHFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALEKLEACGVEGGRPSVYIQA 249
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.720e-91
Identity = 165/272 (60.66%), Postives = 177/272 (65.07%), Query Frame = 1 
Query:   58 SSTLRGSNEADSREDGSRDLAVGFQFQEVGIVTNRAKNPV-----------------------------------------------VYLDVSIGGSAARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYIQA 732
            S+T R   E + +E   R  AVGFQF+EVG + NRAKNPV                                               ++LDVSIGG  ARLTFELRKDIVPRTAENFRSIC+GDR    DGTRLSYQGCVFHRVIKDFAVIGGDIA                        +HDGTG ASIYGG FADENFVLRH GPGVLTCCNAGPDTNSS FMITTVEAPWLNGRSVAFGCLANAESF+AL+K+EA GAEGGRPSVYIQA
Sbjct:   15 SATARLQEENEEKE--GRGRAVGFQFKEVGTLANRAKNPVGERYRDVGTYADVVGVPARHVNPGHTPVHSLRARPPGNWGSKTNARHLFLDVSIGGVPARLTFELRKDIVPRTAENFRSICAGDR---QDGTRLSYQGCVFHRVIKDFAVIGGDIA------------------------RHDGTGIASIYGGHFADENFVLRHTGPGVLTCCNAGPDTNSSAFMITTVEAPWLNGRSVAFGCLANAESFDALEKLEASGAEGGRPSVYIQA 257
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A7S3Y1Y7_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y7_HETAK)

HSP 1 Score: 188 bits (478), Expect = 1.100e-56
Identity = 92/190 (48.42%), Postives = 119/190 (62.63%), Query Frame = 1 
Query:  160 RAKNPVVYLDVSIGGS-AARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYI 726
            R  N ++Y D++I G  A RLTFELR DI P+T ENF+++ +G+R  T DG +LSY+G VFHR++KD+ + GGDI                           DGTGR S +G PF DENF+LRH GPGVL+ CN+GPD+N S F IT VE PWL+GR V FGCL +  S + L K+E  G + GRPS  +
Sbjct:   20 RHLNNIMYFDMTIDGEDAGRLTFELRADIAPKTCENFKALITGERGITEDGVKLSYEGSVFHRIVKDYLIQGGDIV------------------------NQDGTGRLSSFGEPFEDENFILRHTGPGVLSMCNSGPDSNGSQFFITLVETPWLDGRHVVFGCLVDQPSLDTLAKIEQVGHDCGRPSRTV 185
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A7S2GBA6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBA6_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.480e-47
Identity = 85/201 (42.29%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:  127 FQFQEVGIVTNRAKNPVVYLDVSIGGS-AARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGP----FADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRP 714
            +Q QE     +R+ NP+VYLD+SIG   + RL  ELR D+VPR AENFRS+C+G+  +  DGT + ++G +FHR++KD    GGD                        L + DGT  AS++       FADENF+LRH GPGVL+  N+GPDTN S F ++ VE  W++   V FGC+ N +S   L  +E  G++ GRP
Sbjct:   37 YQHQEGAQKGDRSLNPIVYLDISIGNEPSGRLMIELRADLVPRAAENFRSLCTGEHPKHKDGTAMHFKGTMFHRIVKDSLCQGGD------------------------LSQGDGTWSASVFRDNADCLFADENFILRHTGPGVLSMANSGPDTNGSQFYLSFVETAWMDEHHVVFGCVCNQDSLTVLYDIERQGSQSGRP 213
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: UPI00097DDADD (peptidyl-prolyl cis-trans isomerase-like n=2 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00097DDADD)

HSP 1 Score: 162 bits (410), Expect = 7.720e-47
Identity = 84/187 (44.92%), Postives = 110/187 (58.82%), Query Frame = 1 
Query:  169 NPVVYLDVSIGGSA-ARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYI 726
            NP VY DV+ GG+A  R+  ELRKD+VP+TAENFR++C+GD+          Y+GCVFHRVI DF   GGD                           H+GTG  SIYG  FADENF L+H GPG+L+  NAGP+TN S F I TV+  WL+G+ V FG +   E  + + KME+ G++ G+ S  +
Sbjct:    3 NPRVYFDVTAGGAAIGRIVMELRKDVVPKTAENFRALCTGDKG-------FGYKGCVFHRVITDFMCQGGDFT------------------------NHNGTGGKSIYGNKFADENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTAWLDGKHVVFGQVV--EGMDVVKKMESYGSQSGKTSSKL 156
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A7S2VS52_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VS52_9DINO)

HSP 1 Score: 163 bits (412), Expect = 1.520e-46
Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 1 
Query:  118 AVGFQFQEVGIVTNRA-KNPVVYLDVSIGG-SAARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYI 726
            AV   +   G    RA  NP V++D++IGG SA R+  ELR+D+ PRTAENFR +C+G+R     G +LS +G  FHRV++DF   GGD                          + DGTG  S+YGG FADENF L+H GPGVL+  N GP+TNSS F ITT + PWL+G+ V FG +   +  + + K++ C    G+P+  +
Sbjct:   20 AVARWWVAAGAEGRRAMSNPQVFMDITIGGESAGRIVLELRRDVAPRTAENFRCLCTGERGVGVSGKKLSLKGSRFHRVLEDFVCQGGDFT------------------------REDGTGGESVYGGRFADENFELKHGGPGVLSMANGGPNTNSSQFFITTRKTPWLDGKHVVFGSVV--QGMDVVAKIQGCATLSGKPTKPV 198
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A8B7BTP3_PHODC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BTP3_PHODC)

HSP 1 Score: 158 bits (399), Expect = 4.630e-45
Identity = 82/189 (43.39%), Postives = 108/189 (57.14%), Query Frame = 1 
Query:  163 AKNPVVYLDVSIGG-SAARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYI 726
            A NP+VYLDV+I G  A R+  EL  D+ P+TAENFR++C+G++     G  L Y+GC FHRVI  F   GGD    +                        GTG  SIYGG FADENFV +H GPGV++  N+GP+TN S F I T + PWL+GR V FG +   +  + +  ME  G++GGR S  +
Sbjct:    2 ASNPMVYLDVTINGVPAGRIVIELFADVTPKTAENFRALCTGEKGLGRSGKPLHYKGCPFHRVIPGFVSQGGDFTAGN------------------------GTGGXSIYGGKFADENFVKKHTGPGVVSMANSGPNTNGSQFFICTTKTPWLDGRHVVFGHVV--DGMDVVRAMEEVGSQGGRTSEPV 164
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: A0A835YME2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 6.850e-45
Identity = 86/197 (43.65%), Postives = 111/197 (56.35%), Query Frame = 1 
Query:  139 EVGIVTNRAKNPVVYLDVSIGGS-AARLTFELRKDIVPRTAENFRSICSGDR-TETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGP--FADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGA-EGGRP 714
            +  +   RA NP+V++D++I G  A R   ELR DI P  AENFR + +G+R     +   L Y+G +FHR+  D A+ GGD+                         K DGTGR S       F DENF LRH GPGVL+CCN+GPDTN S FM+T V+ PWL+G+ V FG L   ES++ALD +   G  EGGRP
Sbjct:    2 DTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDV------------------------EKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRP 174
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: C3YR41_BRAFL (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YR41_BRAFL)

HSP 1 Score: 157 bits (396), Expect = 1.130e-44
Identity = 78/184 (42.39%), Postives = 110/184 (59.78%), Query Frame = 1 
Query:  178 VYLDVSIGGS-AARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYI 726
            V+ D++IGG+ A R+ FELR D+VP+TAENFR++C+G++     G  L Y+G +FHR I  F V GGDI  ++                        G+G  SIYGG F DENF L H GPG+L+  NAGPDTN S F IT V+ PWL+G+ V FG +   + ++ ++K+EA G+  G  +  +
Sbjct:    2 VFFDITIGGTPAGRIVFELRADVVPKTAENFRALCTGEKGRGTWGEPLHYKGVIFHRCIPGFMVQGGDIQFNN------------------------GSGGESIYGGDFPDENFKLNHTGPGILSMANAGPDTNGSQFFITVVQTPWLDGKHVVFGKVI--QGYDVVEKIEAAGSPSGATTARV 159
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BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Match: UPI0007113CD6 (peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007113CD6)

HSP 1 Score: 157 bits (396), Expect = 2.880e-44
Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = 1 
Query:  145 GIVTNRAKNPVVYLDVSIGGS-AARLTFELRKDIVPRTAENFRSICSGDRTETNDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQLRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITTVEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRP 714
            G+ T RA+NP+V++D + GG    R+ FELR D+VP+TAENFR +C+G++     G +L Y+GC  HR+I +F   GGD  + +                        G G  SIYG  FADENF L+H GPG+L+  N GP+TN S F ITTV  PWLNG  V FG +   +    L  +E+ G+E G P
Sbjct:   21 GLAT-RAENPLVFMDFAAGGKDVGRIVFELRADVVPKTAENFRCLCTGEKGVGKSGKKLHYKGCTLHRIIPEFMCQGGDFTMGN------------------------GMGGESIYGERFADENFTLKHDGPGLLSMANCGPNTNGSQFFITTVPCPWLNGHHVVFGEVK--KGMNVLKTLESLGSESGAP 184
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7177.16011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1E7_ECTSI8.470e-12574.30PPIase cyclophilin-type domain-containing protein ... [more]
A0A6H5JFC7_9PHAE2.720e-9160.66PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S3Y1Y7_HETAK1.100e-5648.42Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hetero... [more]
A0A7S2GBA6_9STRA6.480e-4742.29Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren... [more]
UPI00097DDADD7.720e-4744.92peptidyl-prolyl cis-trans isomerase-like n=2 Tax=P... [more]
A0A7S2VS52_9DINO1.520e-4641.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Brandt... [more]
A0A8B7BTP3_PHODC4.630e-4543.39Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoeni... [more]
A0A835YME2_9STRA6.850e-4543.65Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
C3YR41_BRAFL1.130e-4442.39Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
UPI0007113CD62.880e-4442.41peptidyl-prolyl cis-trans isomerase n=1 Tax=Blasto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7177contigL-elsbetiae_contig7177:2920..8060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue5.1e-99
Seed eggNOG ortholog2880.D7G1E7
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-07_000740.1
Exons7
Model size753
Cds size753
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816797.7996294-CDS-L-elsbetiae_contig7177:2919..30031622816797.7996294-CDS-L-elsbetiae_contig7177:2919..3003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 2920..3003 +
1691683821.1048403-CDS-L-elsbetiae_contig7177:2919..30031691683821.1048403-CDS-L-elsbetiae_contig7177:2919..3003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 2920..3003 +
1622816797.8101058-CDS-L-elsbetiae_contig7177:3473..35671622816797.8101058-CDS-L-elsbetiae_contig7177:3473..3567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 3474..3567 +
1691683821.1178086-CDS-L-elsbetiae_contig7177:3473..35671691683821.1178086-CDS-L-elsbetiae_contig7177:3473..3567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 3474..3567 +
1622816797.823679-CDS-L-elsbetiae_contig7177:3892..40041622816797.823679-CDS-L-elsbetiae_contig7177:3892..4004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 3893..4004 +
1691683821.1314845-CDS-L-elsbetiae_contig7177:3892..40041691683821.1314845-CDS-L-elsbetiae_contig7177:3892..4004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 3893..4004 +
1622816797.8336306-CDS-L-elsbetiae_contig7177:4474..45861622816797.8336306-CDS-L-elsbetiae_contig7177:4474..4586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 4475..4586 +
1691683821.1424906-CDS-L-elsbetiae_contig7177:4474..45861691683821.1424906-CDS-L-elsbetiae_contig7177:4474..4586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 4475..4586 +
1622816797.8470147-CDS-L-elsbetiae_contig7177:5112..51661622816797.8470147-CDS-L-elsbetiae_contig7177:5112..5166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 5113..5166 +
1691683821.1527176-CDS-L-elsbetiae_contig7177:5112..51661691683821.1527176-CDS-L-elsbetiae_contig7177:5112..5166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 5113..5166 +
1622816797.8587368-CDS-L-elsbetiae_contig7177:6602..67521622816797.8587368-CDS-L-elsbetiae_contig7177:6602..6752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 6603..6752 +
1691683821.162282-CDS-L-elsbetiae_contig7177:6602..67521691683821.162282-CDS-L-elsbetiae_contig7177:6602..6752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 6603..6752 +
1622816797.8702812-CDS-L-elsbetiae_contig7177:7913..80601622816797.8702812-CDS-L-elsbetiae_contig7177:7913..8060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 7914..8060 +
1691683821.1752896-CDS-L-elsbetiae_contig7177:7913..80601691683821.1752896-CDS-L-elsbetiae_contig7177:7913..8060Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7177 7914..8060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7177.16011.1prot_L-elsbetiae_contig7177.16011.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7177 2920..8060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7177.16011.1

>prot_L-elsbetiae_contig7177.16011.1 ID=prot_L-elsbetiae_contig7177.16011.1|Name=mRNA_L-elsbetiae_contig7177.16011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp
MFRRRQFQPKMTASATSGCSSTLRGSNEADSREDGSRDLAVGFQFQEVGI
VTNRAKNPVVYLDVSIGGSAARLTFELRKDIVPRTAENFRSICSGDRTET
NDGTRLSYQGCVFHRVIKDFAVIGGDIAVSHVVPTFSFCLSRPFRLFESQ
LRKHDGTGRASIYGGPFADENFVLRHVGPGVLTCCNAGPDTNSSTFMITT
VEAPWLNGRSVAFGCLANAESFEALDKMEACGAEGGRPSVYIQARGLPST
*
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mRNA from alignment at L-elsbetiae_contig7177:2920..8060+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7177.16011.1 ID=mRNA_L-elsbetiae_contig7177.16011.1|Name=mRNA_L-elsbetiae_contig7177.16011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5141bp|location=Sequence derived from alignment at L-elsbetiae_contig7177:2920..8060+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCCGCCGACGCCAATTTCAGCCGAAGATGACGGCCTCGGCCACTAG
TGGGTGCTCGTCAACCCTGCGTGGTTCCAACGAGGTGTGCTGTAAGCACT
TAGTATTAGGTCATTTGTTCTGTTGCACTGGAGATTCCAAACGCGGCTTC
TCCTTTCATCACAAAAACATTACTCATAACAGTATCTGTCCGTTAGTTTT
TATCTTTTTTAAACCATCATCATATCGACGCGCATGAAAAATGGGAGAAA
GGTCGACGCATGCCATATGAAGAAAAGCGGTGGGTTTAGGCGCGGTTGAA
ATGGCGCGCCGTGGTGTATACTCTAATTTGTTCTTTCGATTCCACCATCG
GTTTCATGGTTCACCTCTGACGGAGGAAGCTAGACGTAGCCGCCCAGTAG
GTGGGGGCGCGGGAACATGGGTTGCAATTCTGGCAGGTCTCGTTCGTGAC
CGAAAGAGGGAAGCCCTACCGCACTGGAAACAGCATCTGTCATTTTGATG
ACTCGAGAAAATCCCATCAAACATCGGGCTTCTGCCCCAACCATCTTTTT
GTAGGCTGACTCGAGAGAGGATGGAAGCAGAGATCTAGCGGTCGGCTTCC
AATTCCAGGAGGTCGGCATCGTCACCAACCGAGCCAAGAACCCCGTTGGT
GAGAAAACAAGAGGAGACTCGGCAGGCTGGACAAAAACGCTAGCGACATT
ATTGCACTTTATGTTTTGTTCCAGCGCATGTGCCGGGGGTGGTATCTTAT
GGAGAGGTGGGTCACCTTATATTGTCGCTAATCTGGCGTTGGTCCTTCTT
AGTATCTGTTGGACTAGATAACAAATGCCACGCGAACCGCATAGCTTTGC
TGCAAATATATGGTGGCGCAGTCAGTACCTTTGTACTACCTGCGCCACCT
TTGTGCACAACATCTGTACATTTCAACCGTTGTTTGTCCTCCGGCCGTTA
ACGTGGGTGTTCAATTGTAACAGTTTATTTGGACGTTTCGATCGGCGGCT
CAGCGGCGAGGCTAACCTTCGAGCTGCGCAAGGATATTGTGCCCCGCACG
GCGGAGAATTTTAGATCGATATGTTCGGGTGACCGGTGAGAAGCATGTGT
GGGTGCCAATTGAAGAGAGGAAGTGCAAAGGGGAAGATCAAGTACAATAG
GGGGGATGTAGTAGATAGTAGTTTGGTTCCTTGAACCCTGGTATAGGGGG
GAATAAGGGAATCAGCTCCAACATGCCTGGGATGCTCGGATTCTAGCAAT
GGTAAGGCTGGGATGTTTTCGTCAAGCATGTCTTCCTTTGCTTCACATGG
AGCAAAATACCTTTGATCGTAGGGGATCGTAATCGTCGAGAAAACTGATG
TGAATTCACTGCACATCTCGTATTGCATGATGTACATCAAGCAAAATGCG
ATTCCCAGGGCTGCTAGACCAAGTCCTAACATGACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAGCAACAGTCACGACAGCAA
CAACAGCAGCTACAACACGACACCGCGCACCCACGTGCACTCTCTTTCGC
CCAAGGACCGAGACGAACGACGGAACCCGGCTGAGCTATCAAGGGTGTGT
GTTTCACCGAGTGATCAAGGATTTTGCTGTCATTGGCGGAGACATAGCGG
TGAGCCATGTAGTGCCAGTAAGATTCGTGCCTGGCGTTGAATATAATTTC
AGCCGAGACCCCTGTGACAGGCCAAACTAGAGTTGGGATCACAAGCGAGT
CCTTCCAGACCACCGGGATCTTCGGTTAGGGGGGGCGGGCTCGTACCTCC
CACCGTGCGTTGCTCCACTCGCTGACCGCCACTTGAAAAAATGTCAAGCT
ATAGGAGGGCATTGTTCGAAGCTATTCCCTTGACTGGATTTTGTCGATCT
ACCTCGAAACCTCGACAGAGCGTGTGCGGTGTTGATCTATTCATGCGGTG
GGCCGAAGATCAATAACGTTGATGTTTGACCAAACCAAAAACGTCAAAAC
AGACAGCGGGTGCAGTCCGTAAATATGAGTCGGAACGTGCGTCAGTATGA
CGATACCAATACCACCAATAGAATGCCTAGGGTGAGTGGGTTACCCTAGG
CTGCTTCCTCAGTTTTTGTTTTTTGTATTAGTTGTTCTTTTCGGTAGCGC
CGGCTTTCTGTGATGTGGGTGTGTGCACTCGCTACATATGTAGACATTTT
CATTTTGTCTCTCGCGTCCCTTCCGGTTATTTGAATCGCAGTTGCGTGTC
GTGCTCAATCAAAGTTTCACCTGTACGTACGTGCCTGTGGCCAATACTTT
TCTTCATTTCCGCCCCCCTTATCTCGCGCACCCAAGCAGCTCACTCGCGG
GCACACACACATGAACGTACATACATGCACCCAGACACACACACCCTTAA
TACTTGGAGTTATGTTCGCCTGCATGTGGACTGCACACGTATGCGTGCCC
GCGTGCGTGTGATGTGTGTCCATGAACGGATTGCGCCGCACATGCACTAT
GAAATGGTCGACCGGCCCACCACATCATAGCGTACATACGGTGTGCTTCT
GTTAGTTCCCGCTGTGTGCGAAGGTAGAGGCTTTCCGTGCGTCATGTGCC
TGCATTCCCTGTGTGCGAAGGCATGACCGCGAAGAGGTGAACGTGGCCTT
CTTGGGCCGAAGCATATGTAACGCCTGTCGTAGGTGCATGCACATAGTAC
ATGCGTGATGCGTCTCCGCAATTTCGCCGCGTTTATTTTGTGTTTGACAG
CACCCCACATTCCATAAGATGCCGTCGTAGGCTACGCGTTTTCCCATGCT
GCAGCACTGTGTTCTCTTTGTGTGCAAATGCATGAGCGATGTGTGAGAAG
GCATGGCCGAGATGTGGTGGCCGTTGCTTTTATGGGATGCGAGAATTTCG
ATGATGGGCGTTTGTATTTGTGGCGCCTCCTTATTATTTTAGGGAGGCAA
ATCGACGTCTAAATCGGCGAGAGTTTGATGCACGGGGGACATACCGCGCT
AGTCCGTCAGCAGTTCGGTGTTCCTGCAGTGTGGGAAGGCAATGGCTGCG
AGAGGGCTGTTGTATCTTCCGTGTGTGCAGAGATTTTGACGAAACAGTGT
CGAAAAACACCGTTACCTCACACGTTTTCGAGCTTCATCACACTTTTTTC
GGCTTCATTTTTCTATATCGGTCTGAGAGCTTACAGTGCAGAGGGAAGAC
CTTAGTTCTACCTTAGTTATAAGGAACTAAGGAACAACATCGTCACCGAC
AACCCTCCAAGTGGAAAATTCAACCCCGGTATTCCTCTGCGGCGGGTCGT
GCCCTACTCAGGACGACGAAGCCTCAACAACTCAAATTCCAAAGACAAAA
ACCGTGTGATCAAACGCAGCCGTGTCTGCTGCAAGAGCAGGACCAGGGGG
GTGTCTTGTCGGTGTCTCGATCTCGTAACTTTCCCTGGCTCTCACCGCAA
CCCTCGCCAACAAGCGTGTCGTCGCTGGTTGCAGTGACGCGGGGCCCTCA
CACCCGAGACGCAAGACCCCTCGGGGTCCAGTTTAGTACCGCCGGGCGCG
TATGTACCATATTTTTCTGTTTTATTTGTTTCTTCCGCGGCGTCGGGTGT
GCCTTGTTTTGTGACCACGGGTCCCCAAGGATGTTTTGGACTAGAGAGCT
AATGTGAGAAACGACACCATCGGCTGAATGCAGAAACACGACGGGACAGG
GCGAGCGTCAATCTACGGCGGGCCTTTCGCGGACGAGAATTTCGTACTCC
GGCACGTGGGACCCGGCGTGCTGACCTGCTGCAATGCTGGCCCGGACACA
AACTCCTCGACCTTCATGATCACGACCGTTGAGGTGCTCTCGTATGATAT
TTTTCAGCTGTTGAACTCGTGCGTCGTGCCAAGTACGTTGAGGTTTGAAA
CGGGTAATTAACCTGAGTGTTTTCATCAGAGAACAACAGTTTTGGACTCC
AACGCTAGGCGCCAGGTTTACCCCATGCCAATGGTATGTGTGTGTGTGTC
CTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACATGTACTACA
CCTTGCGGTGTACTTAGAGGTACTCCACTTTGCAGTGCATTTGTATGTAC
AACTAGAACCAACCGGGGTCACACAGGAGGAGGTGAACACTGGGGCTTTT
TCTTCTTTTTTCTTTTCTTTTTTTGCCCCACCTTCCTCCTGCGGTTCTTG
CCTTGGGTTTTATCGCGAGAAGGGTTCAGCTGTCCCTTTCCCTCGTCAAC
GTGATAACGTCGAAGTTTGGTACTCACGAGCTTTTCAGCTTTTATCGCTT
TCACCTGCAAAGTCGCAAAATAAACACTTCTGCTTGGGATTGAACTCCAG
ACTACGCTGCTACTGGGTTCGAGGTTAAACCACTAGACCACCGGGGCGAC
CGGCTGTAGGATAGATCCGGTTATACCGGTGTGTTTGCAGTTCTTTGCCA
AAGTTGTGCTTCGAATTTTGTCAGTCCTTGTGTTTTAAGTCTAAAGGCTC
TTTTCTATTTACACCCCGAGCTGAAGACAGTCAGTATTGTTATTTGTTTG
TTGGGGTAAATAAATCCCCTGGGAACGAACGCTCAGCTTAACCTAAATCA
GGTAAACTACTCCCACTTGCTTGACAGAGAGAGGGAGAATATCGGAGGAA
GGCTTGTGCCATCAAGTATTCTAAGGAATTTTTTCCCATTGGAAATTACG
AAGAAAGGAGAGCGAGAAACAGTTGCGACCGCGTCTACACACACGCATGT
TTTGGTAAACAACCGCAACCGACCACATTTGAGCTGCGTTCGCACCAATT
AAGAAGCACACCGTCTTCGCTCCAGACGGCCCTAGCCAACTTTGAAGATG
GGACGCTTCAGTGCAGTTCTGCAACAACGATACGCGTCTTGAAGGCTGCA
CATCATATCCATCTTTGGTATGCCCCAAACATGCCAACTCCGACACCCAA
TAAATGTCCTTAATTATTCCTGTATAACTCTATACCCAATGTAGGCTCCG
TGGTTGAACGGCCGGAGTGTCGCTTTCGGCTGCCTTGCCAATGCCGAGTC
TTTCGAAGCACTGGATAAAATGGAAGCTTGTGGGGCCGAAGGTGGCCGCC
CCTCTGTCTACATTCAGGCACGTGGGTTACCTTCGACGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7177:2920..8060+

>mRNA_L-elsbetiae_contig7177.16011.1 ID=mRNA_L-elsbetiae_contig7177.16011.1|Name=mRNA_L-elsbetiae_contig7177.16011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1506bp|location=Sequence derived from alignment at L-elsbetiae_contig7177:2920..8060+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCCGCCGACGCCAATTTCAGCCGAAGATGACGGCCTCGGCCACTAG
TGGGTGCTCGTCAACCCTGCGTGGTTCCAACGAGATGTTCCGCCGACGCC
AATTTCAGCCGAAGATGACGGCCTCGGCCACTAGTGGGTGCTCGTCAACC
CTGCGTGGTTCCAACGAGGCTGACTCGAGAGAGGATGGAAGCAGAGATCT
AGCGGTCGGCTTCCAATTCCAGGAGGTCGGCATCGTCACCAACCGAGCCA
AGAACCCCGTTGGCTGACTCGAGAGAGGATGGAAGCAGAGATCTAGCGGT
CGGCTTCCAATTCCAGGAGGTCGGCATCGTCACCAACCGAGCCAAGAACC
CCGTTGTTTATTTGGACGTTTCGATCGGCGGCTCAGCGGCGAGGCTAACC
TTCGAGCTGCGCAAGGATATTGTGCCCCGCACGGCGGAGAATTTTAGATC
GATATGTTCGGGTGACCGTTTATTTGGACGTTTCGATCGGCGGCTCAGCG
GCGAGGCTAACCTTCGAGCTGCGCAAGGATATTGTGCCCCGCACGGCGGA
GAATTTTAGATCGATATGTTCGGGTGACCGGACCGAGACGAACGACGGAA
CCCGGCTGAGCTATCAAGGGTGTGTGTTTCACCGAGTGATCAAGGATTTT
GCTGTCATTGGCGGAGACATAGCGGTGAGCCATGTAGTGCCAGACCGAGA
CGAACGACGGAACCCGGCTGAGCTATCAAGGGTGTGTGTTTCACCGAGTG
ATCAAGGATTTTGCTGTCATTGGCGGAGACATAGCGGTGAGCCATGTAGT
GCCAACATTTTCATTTTGTCTCTCGCGTCCCTTCCGGTTATTTGAATCGC
AGTTGCGTACATTTTCATTTTGTCTCTCGCGTCCCTTCCGGTTATTTGAA
TCGCAGTTGCGTAAACACGACGGGACAGGGCGAGCGTCAATCTACGGCGG
GCCTTTCGCGGACGAGAATTTCGTACTCCGGCACGTGGGACCCGGCGTGC
TGACCTGCTGCAATGCTGGCCCGGACACAAACTCCTCGACCTTCATGATC
ACGACCGTTGAGAAACACGACGGGACAGGGCGAGCGTCAATCTACGGCGG
GCCTTTCGCGGACGAGAATTTCGTACTCCGGCACGTGGGACCCGGCGTGC
TGACCTGCTGCAATGCTGGCCCGGACACAAACTCCTCGACCTTCATGATC
ACGACCGTTGAGGCTCCGTGGTTGAACGGCCGGAGTGTCGCTTTCGGCTG
CCTTGCCAATGCCGAGTCTTTCGAAGCACTGGATAAAATGGAAGCTTGTG
GGGCCGAAGGTGGCCGCCCCTCTGTCTACATTCAGGCACGTGGGTTACCT
TCGACGTAAGCTCCGTGGTTGAACGGCCGGAGTGTCGCTTTCGGCTGCCT
TGCCAATGCCGAGTCTTTCGAAGCACTGGATAAAATGGAAGCTTGTGGGG
CCGAAGGTGGCCGCCCCTCTGTCTACATTCAGGCACGTGGGTTACCTTCG
ACGTAA
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