mRNA_L-elsbetiae_contig7171.16005.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE) HSP 1 Score: 209 bits (532), Expect = 6.040e-64 Identity = 94/98 (95.92%), Postives = 98/98 (100.00%), Query Frame = 1 Query: 1 HLVWMAYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV 294 H++WM+YLA+NLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV Sbjct: 337 HILWMSYLAFNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV 434
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A812UH41_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UH41_SYMMI) HSP 1 Score: 154 bits (389), Expect = 3.010e-44 Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 1 Query: 1 HLVWMAYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 H + + ++ Y + +LA+F V+Q CGLFLALVFGLGHNGMA Y AD RPDFWKLQV+TTRN+TST FVDWFCGGLQYQVDHHLFP +PRHNL+K Sbjct: 173 HYMALGWILYQMPAGNALAYFLVSQTSCGLFLALVFGLGHNGMAVYPADHRPDFWKLQVSTTRNITSTWFVDWFCGGLQYQVDHHLFPSLPRHNLKK 269
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A835YIW8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW8_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.390e-43 Identity = 74/99 (74.75%), Postives = 78/99 (78.79%), Query Frame = 1 Query: 1 HLVWM-AYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV 294 H W A LA L V+++ FF AQ CG LALVFGLGHNGMATYDADARPDFWKLQVTTTRNV+ FVDWFCGGLQYQVDHHLFP IPRHNL KV Sbjct: 329 HYAWFGALLATQLSVVEAVVFFLAAQMMCGFMLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLPKV 427
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A835YVN5_9STRA (Delta-6 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN5_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.090e-43 Identity = 72/99 (72.73%), Postives = 78/99 (78.79%), Query Frame = 1 Query: 1 HLVWM-AYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV 294 H W A LA L +++ FF AQ CG LALVFGLGHNGMATYDAD+RPDFWKLQVTTTRNV+ FVDWFCGGLQYQVDHHLFP IPRHNL+KV Sbjct: 326 HYAWFGALLATQLSAAEAVVFFLAAQMMCGFMLALVFGLGHNGMATYDADSRPDFWKLQVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLKKV 424
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A7S2RVB6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RVB6_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.290e-43 Identity = 74/105 (70.48%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 1 HLVWMAYLAYNLG---FVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 H VWM L G V SLA+F +A C CGLFLALVFGLGHNGMATYDA+ RPDFWKLQVTTTRN+T FVDWFCGGLQYQVDHHLFP +PRHNL K Sbjct: 328 HYVWMFALCSGFGRFSVVYSLAYFFIATCSCGLFLALVFGLGHNGMATYDAETRPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPMMPRHNLAK 432
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A6V1P576_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1P576_HETAK) HSP 1 Score: 154 bits (389), Expect = 7.250e-43 Identity = 69/97 (71.13%), Postives = 77/97 (79.38%), Query Frame = 1 Query: 1 HLVWMAYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 H W+ L + ++ +AFF +Q CGLFLALVFGLGHNGMA YDA RPDFWKLQVTTTRN+TS FVDWFCGGLQYQVDHHLFP IPRHNL+K Sbjct: 328 HYSWVIALCAQMPILRGVAFFFTSQFMCGLFLALVFGLGHNGMAVYDASMRPDFWKLQVTTTRNITSNWFVDWFCGGLQYQVDHHLFPMIPRHNLKK 424
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A7S3PC52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PC52_9STRA) HSP 1 Score: 146 bits (368), Expect = 7.440e-43 Identity = 67/86 (77.91%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 49 SLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVT-----STPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 S+AFF C CGLFLA VFGLGHNGMATYDADARPDFWKLQVTT+RNVT S FVDWFCGGLQYQVDHHLFP +PRH+L K Sbjct: 47 SIAFFMTMTCSCGLFLATVFGLGHNGMATYDADARPDFWKLQVTTSRNVTGGHGFSQAFVDWFCGGLQYQVDHHLFPTMPRHHLAK 132
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A7S3DR72_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DR72_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.080e-42 Identity = 69/90 (76.67%), Postives = 74/90 (82.22%), Query Frame = 1 Query: 37 GFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 G KS+AFF V C CG FLA+VFGLGHNGMATYDADARPDFWKLQVTTTRN+T FVDWFCGGLQYQVDHHLFP +PRHNL+K Sbjct: 335 GIGKSIAFFMVMTCSCGFFLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLKK 424
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A7S2XQ84_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ84_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.310e-42 Identity = 75/105 (71.43%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 1 HLVWMAYLAYNLG---FVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRK 291 H VWMA LA G SL +F A C CGL LALVFGLGHNGMATYDADARPDFWKLQVTTTRN+T FVDWFCGGLQYQVDHHLFP +PRHNL+K Sbjct: 332 HWVWMAALASGFGRFSVAYSLMYFFTATCFCGLVLALVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGIPQAFVDWFCGGLQYQVDHHLFPMMPRHNLKK 436
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Match: A0A7S1B4C9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4C9_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.830e-42 Identity = 73/106 (68.87%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 1 HLVWMAYLAYNLG---FVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRKV 294 H VWMA G KS+ F A C CG FLALVFGLGHNGMATYDAD RPDFWKLQVTTTRN+T FVDWFCGGLQYQV+HHLFPQIPRH+LR V Sbjct: 361 HYVWMAAFCSGFGRFSLAKSIGLFLTATCSCGFFLALVFGLGHNGMATYDADKRPDFWKLQVTTTRNITGGHGIPQAFVDWFCGGLQYQVEHHLFPQIPRHHLRAV 466 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7171.16005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7171.16005.1 >prot_L-elsbetiae_contig7171.16005.1 ID=prot_L-elsbetiae_contig7171.16005.1|Name=mRNA_L-elsbetiae_contig7171.16005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp MAYLAYNLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFback to top mRNA from alignment at L-elsbetiae_contig7171:2531..3655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7171.16005.1 ID=mRNA_L-elsbetiae_contig7171.16005.1|Name=mRNA_L-elsbetiae_contig7171.16005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1125bp|location=Sequence derived from alignment at L-elsbetiae_contig7171:2531..3655+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7171:2531..3655+ >mRNA_L-elsbetiae_contig7171.16005.1 ID=mRNA_L-elsbetiae_contig7171.16005.1|Name=mRNA_L-elsbetiae_contig7171.16005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=564bp|location=Sequence derived from alignment at L-elsbetiae_contig7171:2531..3655+ (Laminarionema elsbetiae ELsaHSoW15)back to top |