mRNA_L-elsbetiae_contig7153.15975.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI) HSP 1 Score: 259 bits (663), Expect = 3.060e-77 Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLALATRVERIAAVNRQRLQALAPKRRRVGGRR 489 VAETVLSTVEAPENL+SRGEGCLVEARVCRVHRRQGT ELEAIRVSE+LPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGP LMVGSISATAV+VESLPTPPQLVVARPP SLH GG D R RVLALA+RVERI AVNRQRLQALAPKRRR+ GRR Sbjct: 124 VAETVLSTVEAPENLISRGEGCLVEARVCRVHRRQGTSELEAIRVSEALPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPRLMVGSISATAVYVESLPTPPQLVVARPPRSLHQD--GGXXXDARRRVLALASRVERIGAVNRQRLQALAPKRRRLRGRR 284
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.640e-33 Identity = 86/215 (40.00%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCL-----------------------------------------------GVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLAL----------------ATRVERIAAVNRQRLQAL 456 VA+TVL+T+EAP + +RGEGCL+EARVCRV RR G E +AIRVSESLPF+EYELQRQL LKLK L G+NA FSL + + +GP L++G+I+ TAV+VE+LP+PP L +A PP G G D R+LA+ ++++E+++A NRQRL ++ Sbjct: 666 VAQTVLATIEAPPAMTTRGEGCLIEARVCRVIRRTGVAETDAIRVSESLPFIEYELQRQLSLKLKALAQPILFVSHNSPATAGSVGTTSVLRQRNPHHLLLALCGLYACHVQVMGMNAVFSLETQLAVGPSLLIGTITGTAVYVEALPSPPILRIA--PPVAARGMTAGGEQDSEQRLLAMQKKPAMNALLLPAVAWSSQIEQLSATNRQRLMSI 878
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A7S4AET6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AET6_9STRA) HSP 1 Score: 112 bits (281), Expect = 8.330e-26 Identity = 64/153 (41.83%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLALATRVERIAAVNRQRLQALA 459 V E VL+T E P L RG G ++ARVCR + + E +A+ VSE+LPF+EYEL RQLMLKLK LG NAAFSL++++ +G L++ +++ATAV+ ++P+P L ++R ++ +++ L ++E+I+A NRQRL A Sbjct: 94 VPEVVLATCEPPARLPIRGPGVFIQARVCRTRQPERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQD---------EEDEKLVKLQRQIEQISAKNRQRLSTAA 237
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.620e-25 Identity = 64/153 (41.83%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLALATRVERIAAVNRQRLQALA 459 V E VL+T E P L RG G ++ARVCR + E +A+ VSE+LPF+EYEL RQLMLKLK LG NAAFSL++++ +G L++ +++ATAV+ ++P+P L ++R ++ +++ L ++E+I+A NRQRL A Sbjct: 652 VPEVVLATCEPPSRLPIRGPGVFIQARVCRSRPAERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGKSLIISTVTATAVYCTAMPSPRILEISRTIAVQD---------EEDQKLVNLQRQIEKISAKNRQRLSTAA 795
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A7S2RRS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRS9_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.660e-25 Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVA 327 V E +L+T+E P L RG G ++ARVCR R + T E +A+ VSE+LPF+EYEL RQLMLKLK LG NAAFSL+S++ +G L++ + +ATA+F +++P P L ++ Sbjct: 96 VPEVILATIEPPARLPVRGPGAFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALFCDAMPPPRVLQIS 203
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA) HSP 1 Score: 110 bits (276), Expect = 4.090e-25 Identity = 64/153 (41.83%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLALATRVERIAAVNRQRLQALA 459 V E +L+T E P L RG G ++ARVCR + E +A+ VSE+LPF+EYEL RQLMLKLK LG NAAFSL++++ +G L++ +++ATAV+ ++P+P L ++R H +++ L ++E+I+A NRQRL A Sbjct: 632 VPEVLLATCEPPARLPIRGPGVFIQARVCRSRPPEKNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDH---------QLVKLQKQIEKISAKNRQRLLTAA 775
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A7S1C0G3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0G3_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.380e-25 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVAR 330 V E +L+TVE P L RG G LVEARVCR+ R + T E +A++VSE+LPF+EYEL RQLMLKLK LG N+AF L+S++ + L+V +++ATA + E++P P L + R Sbjct: 8 VPEIILATVEPPARLPIRGSGVLVEARVCRI-RPKATGERDALKVSEALPFLEYELLRQLMLKLKVLGRNSAFGLKSEVDVDSQLIVATVTATACYCEAMPPPRLLEITR 116
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A7S4VGH9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VGH9_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.020e-24 Identity = 66/156 (42.31%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVARPPPSLHHGYHGGPGGDDRGRVLALATRVERIAAVNRQRLQALAPKR 468 V E +L+TVE P L RG+G ++ARV R R + T E +A+ VSESLPF+EYEL RQLM+KLK LG NAAFSL+S++ +G L++G+ +ATA++ +++P P L ++R H +++ L ++E+I+ NR RL A +R Sbjct: 389 VPEVILATVEPPARLPVRGQGVFIQARVMR-SRPKATNETDALAVSESLPFLEYELARQLMVKLKILGRNAAFSLKSEVDVGSQLIIGTATATALYCDAMPPPRVLEISRTIAVQDEEDH---------QLVKLQHQIEKISERNRHRLALSAQRR 534
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.020e-24 Identity = 57/110 (51.82%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVAR 330 V E +L+TVE PE L RG G ++ARVCR R + T E +A+ VSE+LPF+EYEL RQLMLKLK LG NAAFSL+S++ +G L++ + +ATA++ +++P P L ++R Sbjct: 434 VPEVILATVEPPERLPVRGSGVFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALYCDAMPAPRALEISR 542
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS) HSP 1 Score: 108 bits (269), Expect = 3.410e-24 Identity = 60/110 (54.55%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPCLMVGSISATAVFVESLPTPPQLVVAR 330 V E +L+TVE P L RG G V+ARVCR R + T E +A+ VSE+LPF+E++L RQLMLKLK LG NAAFSLRS+I +G L+V + +ATAV+ E++P P L ++R Sbjct: 635 VPEIILATVEPPSRLPIRGTGVFVQARVCRT-RPRATGESDALAVSEALPFLEFDLARQLMLKLKILGRNAAFSLRSEIDVGSQLIVATATATAVYCEAMPPPRVLEISR 743 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7153.15975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7153.15975.1 >prot_L-elsbetiae_contig7153.15975.1 ID=prot_L-elsbetiae_contig7153.15975.1|Name=mRNA_L-elsbetiae_contig7153.15975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp VAETVLSTVEAPENLVSRGEGCLVEARVCRVHRRQGTRELEAIRVSESLPback to top mRNA from alignment at L-elsbetiae_contig7153:3907..6664+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7153.15975.1 ID=mRNA_L-elsbetiae_contig7153.15975.1|Name=mRNA_L-elsbetiae_contig7153.15975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2758bp|location=Sequence derived from alignment at L-elsbetiae_contig7153:3907..6664+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7153:3907..6664+ >mRNA_L-elsbetiae_contig7153.15975.1 ID=mRNA_L-elsbetiae_contig7153.15975.1|Name=mRNA_L-elsbetiae_contig7153.15975.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig7153:3907..6664+ (Laminarionema elsbetiae ELsaHSoW15)back to top |