mRNA_L-elsbetiae_contig7121.15935.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7121.15935.1
Unique NamemRNA_L-elsbetiae_contig7121.15935.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A6H5KX78_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX78_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 1.710e-124
Identity = 184/196 (93.88%), Postives = 188/196 (95.92%), Query Frame = 1 
Query:    1 QAAKGKAG------MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHKSAKCMQRRLPHS 570
            +AA G+AG      MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRC DVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPAR++YTPLIFGFKIHKSAKCMQRRLPHS
Sbjct:   21 KAAPGEAGSNIRVRMLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHKSAKCMQRRLPHS 216
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: D7FSE5_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE5_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 1.950e-115
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHK 534
            MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRC DVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPAR++YTPLIFGFKIHK
Sbjct:    1 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 170
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A6V1P2G8_HETAK (Casein kinase II subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2G8_HETAK)

HSP 1 Score: 253 bits (647), Expect = 8.190e-78
Identity = 116/184 (63.04%), Postives = 142/184 (77.17%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHKSAKCMQRRLPHSAA 576
            MLCEVDRSYIEDGFNLYGLR H  NFQ  LDIILD +  D+  DP++AQ+A++LYG+IHARFI T+RGLE MYKKYR  +FGRCPR +CK+Q VVP GI+D P KE VK+YCP+C  VY   +  G + LDG+FFGT+F HLFF+TF+RL+P+P   TY P +FGFKIH SAKC ++     AA
Sbjct:   27 MLCEVDRSYIEDGFNLYGLRQHVPNFQNVLDIILDNSV-DDNLDPMMAQAAYLLYGLIHARFITTSRGLEVMYKKYRTGDFGRCPRMLCKDQFVVPAGIYDHPNKEKVKVYCPKCGQVYGVPTNPGEQGLDGSFFGTTFPHLFFLTFNRLIPEPCTETYIPRVFGFKIHPSAKCARQPASQPAA 209
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A835ZBJ6_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.440e-64
Identity = 114/185 (61.62%), Postives = 133/185 (71.89%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQP-VVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVP-DPARATYTPLIFGFKIHKSAKCMQRRLPHSA 573
            MLCEVDRSYIED FNLYGLRHHF NFQ CL+IILD++AA+E +DP VAQSAFMLYG+IHARFIVT RGL+AM KKYRLAEFGRCPR +C++Q  V P G                         P+G EPLDGAFFGTSFAHLF ++FDR +P D  R +YTP IFGFK++K+A    R+ P  A
Sbjct:    1 MLCEVDRSYIEDSFNLYGLRHHFPNFQECLNIILDKSAAEECRDPKVAQSAFMLYGLIHARFIVTTRGLDAMLKKYRLAEFGRCPRMLCRDQVYVAPAG-------------------------PHGEEPLDGAFFGTSFAHLFIMSFDRWMPADVTRDSYTPRIFGFKVNKAAAPTPRKNPVGA 160
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A7S0GAP8_9STRA (Casein kinase II subunit beta n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAP8_9STRA)

HSP 1 Score: 210 bits (535), Expect = 9.490e-61
Identity = 101/180 (56.11%), Postives = 127/180 (70.56%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGE-----PLDGAFFGTSFAHLFFITFDRLVPD--PARATYTPLIFGFKIHKSAK 543
            M CEV+RSYIEDGFNLYGLR   +NF  CLD+ILDR   D+  +  + QSA  LYG+IHAR+I+TA GL+AMY KY   EFG CP T C  QPV+PVG+ DE  +++VK++CP+C  VY+   PYGG       +DGA FGT+F HLF +TF  LVPD   A ATY P +FGF++H SA+
Sbjct:   28 MFCEVERSYIEDGFNLYGLRASVSNFSDCLDLILDRIGPDDSDESKLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLTQCTGQPVLPVGLRDEIGQDSVKIFCPKCQCVYHP--PYGGRRGGSGTVDGASFGTTFPHLFLMTFSNLVPDGLAADATYVPRVFGFRVHHSAR 205
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: B8BZE6_THAPS (Casein kinase II subunit beta (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZE6_THAPS)

HSP 1 Score: 203 bits (517), Expect = 1.020e-60
Identity = 95/174 (54.60%), Postives = 120/174 (68.97%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDP--ARATYTPLIFGFKIHKSA 540
            M CEV+R+YIEDGFNLYGLR   +NF  CLD+ILDR   D+  D  + QSA  LYG+IHAR+IVTA GL++MY KY   EFG CP   C  QPV+PVG+ DE   + VK++CP+C  VY          +DGA FGT+F HLF +TF+ LVPDP  + + Y P +FGF++HKSA
Sbjct:    9 MFCEVERAYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIVTAHGLDSMYNKYASKEFGTCPLVQCNGQPVLPVGVKDEIGVDTVKIFCPKCKSVYQPPPIRTRSTVDGAAFGTTFPHLFLMTFNNLVPDPLPSDSAYIPRVFGFRVHKSA 182
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.240e-60
Identity = 97/179 (54.19%), Postives = 126/179 (70.39%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEP-LDGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHKSAKCMQRR 558
            M CEVDRSYIEDGFNLYGLR +  N   CLDIILDR   ++  + ++ QS++MLYG+IHAR+I+T  GLEAM KK+ + +FG CPR +C+   VVP+G+ DEPK E VKL+CP C DVY   +P   +  LDGA+FGT+FAHLF +T++   P  A+  Y P IFGF+IH+ A     R
Sbjct:   26 MFCEVDRSYIEDGFNLYGLRQYVPNITECLDIILDRVGPEDSDEDLL-QSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPSSPQAQLDGAYFGTTFAHLFCMTYEITAPT-AKELYVPRIFGFRIHREASSTDTR 202
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A6U4CN35_9STRA (Casein kinase II subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CN35_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.140e-59
Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = 1 
Query:   28 LCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDP--VVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPL-DGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHKSAK--CMQRR 558
             CEVDRSYIEDGFNLYGLR++ +NF  CL +ILD T  D+  D    +  +A  LYG+IHARFI+T+ GLE M  K+   EFG CPR  CK QPVVP+G  D+ + ++VK +CP C D+Y+   P  G  L DGA+FG +FAHLFF+TF+ LVPDP+R+ Y P +FGFK+H S++  C+ +R
Sbjct:   28 FCEVDRSYIEDGFNLYGLRNYVSNFMDCLHLILDDTPPDDGGDERRELLMNASRLYGLIHARFILTSAGLECMCSKFLAKEFGFCPRVHCKGQPVVPIGCSDDLEIDSVKCFCPLCGDIYSPPQPPDGSRLPDGAYFGRTFAHLFFMTFEDLVPDPSRSAYVPRVFGFKVHMSSRSLCVAKR 209
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BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.510e-59
Identity = 98/184 (53.26%), Postives = 122/184 (66.30%), Query Frame = 1 
Query:   25 MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTV---------SPYGGEPLDGAFFGTSFAHLFFITFDRLVPDP--ARATYTPLIFGFKIHKSAK 543
            M CEV+RSYIEDGFNLYGLR   +NF  CLD+ILDR   D+  D  + QSA  LYG+IHAR+I+TA GL+AMY KY   EFG CP   C  QPV+PVG+ DE   + VK++CP+C  VY+            P G   +DGA FGT+F HLF +TF  LVPDP  A + Y P +FGF++H SA+
Sbjct:   28 MFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSAR 211
[Close]
BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Match: A0A8K1C3U2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3U2_PYTOL)

HSP 1 Score: 199 bits (507), Expect = 1.710e-58
Identity = 97/182 (53.30%), Postives = 123/182 (67.58%), Query Frame = 1 
Query:   28 LCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARATYTPLIFGFKIHKSAKCMQRRLPHSA 573
             CEV  SYIED FNLYGLR    NFQ  ++IILD T  D P D  V   A  LYGMIHAR+I+T+ GL++M KKYR  +FG CPR +C+ QPVVP G+ DE KK  +K++CP+C D+Y  V+ Y   P+DGA+FGT+F HLFF+T+  L P P+   Y P IFG+KIH      +RRL  +A
Sbjct:   24 FCEVPTSYIEDSFNLYGLRALIPNFQEAMNIILDMT--DIPYDDDVPACAAELYGMIHARYIITSHGLDSMMKKYRDRDFGVCPRALCEGQPVVPAGMHDEWKKSEMKVFCPKCRDLYTPVTEYNSPPIDGAYFGTTFPHLFFMTYRELEPPPSTVIYVPRIFGYKIHNRG-ANRRRLALTA 202
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7121.15935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX78_9PHAE1.710e-12493.88Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
D7FSE5_ECTSI1.950e-11598.24Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A6V1P2G8_HETAK8.190e-7863.04Casein kinase II subunit beta n=1 Tax=Heterosigma ... [more]
A0A835ZBJ6_9STRA6.440e-6461.62Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7S0GAP8_9STRA9.490e-6156.11Casein kinase II subunit beta n=1 Tax=Proboscia in... [more]
B8BZE6_THAPS1.020e-6054.60Casein kinase II subunit beta (Fragment) n=1 Tax=T... [more]
A0A835ZJS8_9STRA8.240e-6054.19Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A6U4CN35_9STRA1.140e-5953.85Casein kinase II subunit beta n=1 Tax=Phaeomonas p... [more]
A0A448YXJ5_9STRA4.510e-5953.26Casein kinase II subunit beta n=1 Tax=Pseudo-nitzs... [more]
A0A8K1C3U2_PYTOL1.710e-5853.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7121contigL-elsbetiae_contig7121:10..5679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.1
Seed ortholog evalue1.1e-95
Seed eggNOG ortholog2880.D7FSE5
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein kinase regulator activity
EggNOG OGsCOG5041@1,KOG3092@2759
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Ec32 ortholog descriptionCasein kinase II, regulatory subunit
Ec32 orthologEc-25_000900.1
Exons6
Model size1194
Cds size1170
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.7896378-CDS-L-elsbetiae_contig7121:9..6701622816790.7896378-CDS-L-elsbetiae_contig7121:9..670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 10..670 -
1691683815.76664-CDS-L-elsbetiae_contig7121:9..6701691683815.76664-CDS-L-elsbetiae_contig7121:9..670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 10..670 -
1622816790.8014886-CDS-L-elsbetiae_contig7121:1488..16121622816790.8014886-CDS-L-elsbetiae_contig7121:1488..1612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 1489..1612 -
1691683815.7831802-CDS-L-elsbetiae_contig7121:1488..16121691683815.7831802-CDS-L-elsbetiae_contig7121:1488..1612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 1489..1612 -
1622816790.8130538-CDS-L-elsbetiae_contig7121:2167..22641622816790.8130538-CDS-L-elsbetiae_contig7121:2167..2264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 2168..2264 -
1691683815.796984-CDS-L-elsbetiae_contig7121:2167..22641691683815.796984-CDS-L-elsbetiae_contig7121:2167..2264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 2168..2264 -
1622816790.8234832-CDS-L-elsbetiae_contig7121:2581..26531622816790.8234832-CDS-L-elsbetiae_contig7121:2581..2653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 2582..2653 -
1691683815.806602-CDS-L-elsbetiae_contig7121:2581..26531691683815.806602-CDS-L-elsbetiae_contig7121:2581..2653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 2582..2653 -
1622816790.8341436-CDS-L-elsbetiae_contig7121:4659..47631622816790.8341436-CDS-L-elsbetiae_contig7121:4659..4763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 4660..4763 -
1691683815.8161209-CDS-L-elsbetiae_contig7121:4659..47631691683815.8161209-CDS-L-elsbetiae_contig7121:4659..4763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 4660..4763 -
1622816790.848043-CDS-L-elsbetiae_contig7121:5543..56551622816790.848043-CDS-L-elsbetiae_contig7121:5543..5655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 5544..5655 -
1691683815.8251057-CDS-L-elsbetiae_contig7121:5543..56551691683815.8251057-CDS-L-elsbetiae_contig7121:5543..5655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7121 5544..5655 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.8598967-UTR-L-elsbetiae_contig7121:5655..56791622816790.8598967-UTR-L-elsbetiae_contig7121:5655..5679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7121 5656..5679 -
1691683815.8337817-UTR-L-elsbetiae_contig7121:5655..56791691683815.8337817-UTR-L-elsbetiae_contig7121:5655..5679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7121 5656..5679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7121.15935.1prot_L-elsbetiae_contig7121.15935.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7121 10..5655 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7121.15935.1

>prot_L-elsbetiae_contig7121.15935.1 ID=prot_L-elsbetiae_contig7121.15935.1|Name=mRNA_L-elsbetiae_contig7121.15935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MLCEVDRSYIEDGFNLYGLRHHFANFQGCLDIILDRTAADEPQDPVVAQS
AFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIF
DEPKKEAVKLYCPRCSDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRL
VPDPARATYTPLIFGFKIHKSAKCMQRRLPHSAAAPASSQQPNGGNGSNN
NNNNSNTNNNNNNTGGSVAGAAGPPGGATNSSNSSPAPAHLRGGAAAVAV
AAAAAAAAAGVAAGSGAGGGRGGGGANLNNLNAAQGGAAEAAAPGSGARD
NVSKDARRSGGGGGGGSGGGGGGGGSGGGGGGGGGGGESEKSGGRSGKKK
KRRSSKSGESASSRGGGGGRGGGGARGGGGGGGGGGGGGG
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mRNA from alignment at L-elsbetiae_contig7121:10..5679-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7121.15935.1 ID=mRNA_L-elsbetiae_contig7121.15935.1|Name=mRNA_L-elsbetiae_contig7121.15935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5670bp|location=Sequence derived from alignment at L-elsbetiae_contig7121:10..5679- (Laminarionema elsbetiae ELsaHSoW15)
CAGGCCGCGAAGGGCAAGGCAGGCATGCTGTGCGAGGTGGATAGAAGCTA
CATCGAGGATGGGTTCAACTTGTACGGGTTGCGGCACCACTTTGCCAACT
TTCAAGGGTGCCTCGACATCATCCTCGACCGCACAGGTGAAAAGGAAGCT
TGACTTGATTGTCTGCGTCTGCTTTGTCCTTTCCCGAACGGTCTATTCTG
GCGGCTGCCATCATCTCTTCGCTGCACTTTTATGTCTCCTACATACAAGT
ATATAGATTTCGGTGTGCCAGCTACATATACGTATGCTCCGTGCAAGTAC
GCAACTAAATAGACATCGTGTACCGGTAGTCTGCGCAGGTTCTTGTTCGG
CGAAACATATGGGACAAAGTATGGAATCGGGGAATGTTTGGGAATATTAA
TTTAGTTCTTGGAGTAGACGGCATATCTTTATTTGTTGTTATTTTAACCA
CCTTAATTTTTCCTCTTTGTTAGCTTCTTGGTCTTTTGATAAAGGGGACG
TAAAAAGATATTTAATCAGTTTTATAAGCATGGAACTAGTTTTACTTTTA
CTTTTTACTTGTGACGTATGTGATTGACGGGACCTCGTATGTGTGTGTGT
CTGTGCCTGTATCTGTGTCTGTGTCTGTGTGTGTGTGTGTCCGCGCGTGG
GCGTGTGTGTGTTATTTTGCTAACTCTCTGCCCTCAGCTATAATTAACCT
CTTCCCCGACCGCGCTGCTTGTTTTTTCTTTTTGCGACCGACCGCGTTGC
TTGTTTTTTCTTTTACGACCGACCGACGGATTGACTGGTTGCTGCTGCTG
CTGCTGCTGCTGCATATTTCCATCGTGCCCGACTTGGTCTTCTCGCCCGA
CTTTGTCTTTCTCGCCCGACTTTGTCTTTCTCGCCCGACTTTGCCTTTCT
CGCACGTTTTTTGAAGCCGCGGACGAGCCGCAAGACCCCGTGGTGGCGCA
GTCAGCCTTCATGCTCTACGGCATGATCCACGCCAGGTTCATCGTCACCG
CTCGGGGGCTCGAGGCTATGGTGGGTTTTCTTGTTCCATGAAGAAGAGAT
GAGGAAATCGGAGACGGAAAACCTTCCCGTTACCTACAATCAGAACCGGG
ACTTCCGGGGTGAAATCCCATTTCCATTTCCATACTTCTTGCTTTGCTGA
CACCCTTGGGGGTCCGTTTTTCCCTTGCAGTTATAACCCTTTTTAGGTCA
AGTCAGCCTGTAACCACGGGAATCGACCGCATCGTGAGATAAGTGTGGAC
GTAACATACCGTAGGTGACACAAGATACCACACCCCCTGGACGTATTTTC
AAAGCTCGATTCCTCCCCAGTAAGAAGAACGACAGTGCCAATAGGGGTGT
CGTCGGGAAGATCTAGCCGAGGGCTATCCGAAAATGTGTTGTTTGGTGCT
GGCACCTTATTCGTTACGGAGTAATAATCGAGCTCTCAAATTCGGTCCAG
GGGGTGTGGTATCTTGTGTCACCTACGGTATGGAGGTACTGGATAGAGAG
ATCGGAACGGTTTTGAATGCGAACACAACATCAACAACAACAACAATACA
GCAGTGATGTGATACTGGCCCGGCATAGTAGCAAAACACCAACAGGTACA
TGGAAAGAAGCACAATATTTATTCTAAAAGTTCACCACCCCCCCTGCACA
GCTCTGCCCAGGGCATTCAGCCAACAAGTTTCACGGGGAGAACCCCTCTC
TGTATTTTGGTGCGGTATCGGAGTTAGCCGGGGTTTATTGTAGGGTGTTT
GAAGGGTTCTTGTACCCCTTCCGGGTGCGCGCATCCGACCTGACTGCGGA
GACCCTGAAGCAGCCCCCAGTGTTCCACGCTTGCACATACCGAGGCTGCA
CTCGAGGACCGCCGACAAAGAGATACACGGAGCGGAGAGGATACCTCAAT
AGACCTGCAACTGCTGCACTCAGGCACCTGCCACACGCAGCACCTGTAAA
GGCCATTGTAATGCAGGCGTCTGCCACACGCAGCGCTGGTAAAGGTCATT
GTAGTGTACACAAGTGGGTACCCTCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCAATTTTTTTTTTTTTGGGGTCCCCTTTTTTTGTTTTCTCTTTCTG
GGGGGGGGAGTGTGGGAAAAAAAAGTTTTTTTGTGGGCCACANNNNNNNN
NNCTTGAAAGCCCAATTTTAATACGCCGTCCCCCCCCCCCACCTCTGCTA
AAGCCGTCTTTTATGTACACAAGGGGGTACCCCCCCCCCCCCCCCCCCCC
CCCCTAGTTCCATCAATTTTTTTATGTTGTGGGTCTCCTTTTTCGGTTTC
AATGTCACGGGGGCAGGAAGTTACGATACAAAGTATTTGTTGGGGCCAAC
ATTGCGGGACGAGACGGCTGAACTCTTCTCGCGTTTAAAATGTTAGGCAA
GCACCGCAGAGGGGTGGGTGTGGGGGGCTCAGGGAGAGGAACCCTCCTAC
ATGCCTATGTGTGGCCACGGATCAGAGCTCTGGCAAGATGCCCCTTGAGC
GCTGGGTTTAATGTGACGAGAATAAAAAAAATGTATACATCTAACCCCGT
AGTCGAAGGCAATACATAGGTTGCTCTTGTGTGTACCATATCTATTTACA
TACAACGATGATCGTTACAAATGACCCGCCGCGCCCCCATTTTCCCGCCC
GGCGACCCCCCGTAGTAAGCGGGCCAACAATGACAAAAACATATAGACGG
ACGCGAGCAGCGTGCCGAGGGGCACGCAGACGAAAAGCGCCGAAGCGTCC
GAGTATCTATGTATTTATCCTAGGCCCATGTGTCTTCATATCCATCCACC
GACTATAGTAGCAGACGGTGGTGCTCTGCTTCGTCTTGAAAGGAGTGCAT
GGCCGCAAGTCGTAAAAAAAGTGGATACGGCCAGACCCCCTTCAATGGAC
CCCCCCCCAATATCACGGAACCCCCTGTTTCGTCTTGCAAGCAGGGGGGT
AGGATAGGGTGGTTGATCATGGTCCACTGACTGCAGGCCCCCGGACCTTC
CCACTCGCGTGTCATTGTGGTTTCAGTACAAGAAGTATCGGCTGGCAGAG
TTTGGCAGGTGCCCGAGGACCATGTGCAAGAACCAGCCAGTTGTGCCGGT
AAGAGAAGAAGAGGGGCTCGGGAAGGGGTCCCGTCGATCGAGGAGGGGAG
AGAATGGGAGGGAGGCCGTCGATGTATGGAATACGGTTTGTTGGAAAGCG
ATGGGACGATCTCTTTTTTCTAAGCTTACCGTTGTCTTGACCTTTGTTGT
CGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTACGTAGTTGTGTTGCC
GGGTAGTGGCTGTGCCGCTTTGTGTTGCAGCTGCTGTTGGTCGCTGATGT
TGGCTGCCTTCTATCTCTCTCTTGCTCCTCTTTGGTCGGAAACGAACGAC
ATCGACACACGCCAGGTGGGTATCTTCGACGAGCCCAAGAAAGAAGCCGT
CAAGCTCTACTGTCCACGTTGTAGCGACGTCTACAACACCGTCAGCCCGT
ACGGCGGCGAACGTGAGTGTTTTATTTTTGTTTTTGTAAATACCACATAC
TCCGAAGAGTGCGCTTGGAAATGAAGAGCAGGGCTGCCCTTACTCACCCG
CAAAGAATCTTCCTGGAATTTTCCCTACTGCTACGGTAGCTCTTGCCATA
TTTTGCTCGTCTAACCCTCCCAAAAACTGAATAACCTCCTGCGTCCACCC
CCCTCCTGTGTGACCCCCGGCTAATATCGGTAGCCTAGGTGCAGTACTGC
ACGCAGATAATTGTCTTCAGCTAAAAACACACGGGATAAAGTATATGAAC
CGCGAAAGGGGGCCGGTTTTCTTGGGGTTTGGGGGTTAGGGTTCGGGTTA
CGGAACCCCTGTCTCTATTTCCTAGACACGTATGTATGTATGTATGTACA
TAGCTTAATTTCTTCACCGAAGGCGGTCCGCTGACATCTACGCGCGATCG
AACATGCCCTTACTTCCCTTCCCGTCCCGTCCCTTCCGTCCGCTTCTGCC
GTTTCGGTCTCCTCTCTTCCTTCTCATCGCATTGCACCGCATTGCACCGC
ATTGCACCGCATTGCAGCACTGGACGGGGCGTTCTTCGGCACGTCCTTCG
CCCACCTGTTTTTCATCACGTTCGACAGGCTTGTGCCGGATCCGGCCAGG
GCTACCTACACGCCCCTCATCTTCGGCTTCAAGATCCACAAGTATGTACA
TATGACGTGTACTTAATGATGTTTACGGCGGTGCAGGCGTTGAGTTAGTT
GGTTCTGGTGTGGCTGTCGTCGGTGATGCTGTTGCCTGCTGCTGTTGCCT
GTATTTTATTTATTCACGGAAAGGGTTCGTCGATCCTATTTAGCGCCATG
CATGCACGAAGTTTTTTTTTGTTTTCACGAACAAACGCGCGCCATTTTTG
CCTTTCTGCCGCACCGAATTGCCCTGGTGCTGTACGATACAGCAGTCAGT
GATGCGCTGTACGATACAGCAGTAGTCACGTGTAGTCGCCCTTTGGGGTC
CGATCAGCTACCGAAAACACCTATTCCGCTACTCTAATCTGCGTTCGCTG
TGCCCGCCCAGCCCTCTCCAAAACAGGACAACAGCAGTATACAATCTTAT
ACGCAGCTATGTCCCTTGCTCTCCCTCCCAATTCCTCCTGTGCGTAGCTT
CTACAGGCTCGACAGACAGGCAAAGCCATGCATATTCAATCGCATGCGCG
ACCATGCATGTAGATGCCCTTCCTTTTGAAAGAAGGCGTGGCCGAAAAGG
TGCATAAAGCAACCGCCGAACGAGTAGTCTCCCTTACCCAACCACCCACA
CCCCCCACCCTCCCCCCCCGACGTCCCCCCCCCCTCGCATAACACAACCT
CTAGACCGACNNNNNNNNNNCCAGAAGGTGAGGGCCCTTTTCTTTAGAAA
AGGGGGGGGGCAAAAAGGGGAAAAAACAACCCCCCCGAAGGGGGGGTTCC
CCCCCCCCCCCCCCCCCCCCCCGCCCGTTGTTTCCGTGCATGGTTTGTTT
GCACGATAGATCCGCCAAGTGCATGCAGCGGCGGCTCCCGCACTCCGCGG
CGGCGCCGGCCTCGTCGCAGCAGCCCAACGGAGGAAACGGCAGCAACAAC
AATAACAACAACAGCAACACCAACAACAACAACAACAACACTGGCGGCTC
GGTGGCCGGCGCCGCCGGCCCACCCGGCGGCGCAACAAACTCGTCCAACT
CTTCCCCGGCCCCGGCGCACCTGCGTGGCGGCGCCGCGGCGGTGGCGGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCAGGGGTTGCGGCCGGGAGTGGTGC
GGGCGGGGGCAGGGGCGGGGGTGGGGCTAATCTGAACAATCTGAACGCTG
CTCAGGGCGGGGCGGCGGAGGCTGCGGCGCCAGGGAGCGGGGCTCGTGAC
AACGTGAGCAAAGACGCCAGAAGGAGCGGCGGCGGCGGCGGCGGCGGCAG
TGGCGGCGGCGGCGGCGGCGGTGGCAGTGGCGGCGGCGGTGGCGGTGGCG
GCGGCGGCGGTGAAAGCGAGAAGAGCGGCGGAAGAAGCGGGAAGAAGAAG
AAGCGCAGGAGCAGCAAGTCCGGGGAGTCCGCGTCATCGCGGGGGGGGGG
GGGGGGGAGGGGGGGGGGGGGGGCGCGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7121:10..5679-

>mRNA_L-elsbetiae_contig7121.15935.1 ID=mRNA_L-elsbetiae_contig7121.15935.1|Name=mRNA_L-elsbetiae_contig7121.15935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2340bp|location=Sequence derived from alignment at L-elsbetiae_contig7121:10..5679- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTGCGAGGTGGATAGAAGCTACATCGAGGATGGGTTCAACTTGTA
CGGGTTGCGGCACCACTTTGCCAACTTTCAAGGGTGCCTCGACATCATCC
TCGACCGCACAGATGCTGTGCGAGGTGGATAGAAGCTACATCGAGGATGG
GTTCAACTTGTACGGGTTGCGGCACCACTTTGCCAACTTTCAAGGGTGCC
TCGACATCATCCTCGACCGCACAGCCGCGGACGAGCCGCAAGACCCCGTG
GTGGCGCAGTCAGCCTTCATGCTCTACGGCATGATCCACGCCAGGTTCAT
CGTCACCGCTCGGGGGCTCGAGGCTATGCCGCGGACGAGCCGCAAGACCC
CGTGGTGGCGCAGTCAGCCTTCATGCTCTACGGCATGATCCACGCCAGGT
TCATCGTCACCGCTCGGGGGCTCGAGGCTATGTACAAGAAGTATCGGCTG
GCAGAGTTTGGCAGGTGCCCGAGGACCATGTGCAAGAACCAGCCAGTTGT
GCCGTACAAGAAGTATCGGCTGGCAGAGTTTGGCAGGTGCCCGAGGACCA
TGTGCAAGAACCAGCCAGTTGTGCCGGTGGGTATCTTCGACGAGCCCAAG
AAAGAAGCCGTCAAGCTCTACTGTCCACGTTGTAGCGACGTCTACAACAC
CGTCAGCCCGTACGGCGGCGAACGTGGGTATCTTCGACGAGCCCAAGAAA
GAAGCCGTCAAGCTCTACTGTCCACGTTGTAGCGACGTCTACAACACCGT
CAGCCCGTACGGCGGCGAACCACTGGACGGGGCGTTCTTCGGCACGTCCT
TCGCCCACCTGTTTTTCATCACGTTCGACAGGCTTGTGCCGGATCCGGCC
AGGGCTACCTACACGCCCCTCATCTTCGGCTTCAAGATCCACAACACTGG
ACGGGGCGTTCTTCGGCACGTCCTTCGCCCACCTGTTTTTCATCACGTTC
GACAGGCTTGTGCCGGATCCGGCCAGGGCTACCTACACGCCCCTCATCTT
CGGCTTCAAGATCCACAAATCCGCCAAGTGCATGCAGCGGCGGCTCCCGC
ACTCCGCGGCGGCGCCGGCCTCGTCGCAGCAGCCCAACGGAGGAAACGGC
AGCAACAACAATAACAACAACAGCAACACCAACAACAACAACAACAACAC
TGGCGGCTCGGTGGCCGGCGCCGCCGGCCCACCCGGCGGCGCAACAAACT
CGTCCAACTCTTCCCCGGCCCCGGCGCACCTGCGTGGCGGCGCCGCGGCG
GTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCAGGGGTTGCGGCCGG
GAGTGGTGCGGGCGGGGGCAGGGGCGGGGGTGGGGCTAATCTGAACAATC
TGAACGCTGCTCAGGGCGGGGCGGCGGAGGCTGCGGCGCCAGGGAGCGGG
GCTCGTGACAACGTGAGCAAAGACGCCAGAAGGAGCGGCGGCGGCGGCGG
CGGCGGCAGTGGCGGCGGCGGCGGCGGCGGTGGCAGTGGCGGCGGCGGTG
GCGGTGGCGGCGGCGGCGGTGAAAGCGAGAAGAGCGGCGGAAGAAGCGGG
AAGAAGAAGAAGCGCAGGAGCAGCAAGTCCGGGGAGTCCGCGTCATCGCG
GGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGCGCGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGATCCGCCAAGTGCATGCAGCG
GCGGCTCCCGCACTCCGCGGCGGCGCCGGCCTCGTCGCAGCAGCCCAACG
GAGGAAACGGCAGCAACAACAATAACAACAACAGCAACACCAACAACAAC
AACAACAACACTGGCGGCTCGGTGGCCGGCGCCGCCGGCCCACCCGGCGG
CGCAACAAACTCGTCCAACTCTTCCCCGGCCCCGGCGCACCTGCGTGGCG
GCGCCGCGGCGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCAGGG
GTTGCGGCCGGGAGTGGTGCGGGCGGGGGCAGGGGCGGGGGTGGGGCTAA
TCTGAACAATCTGAACGCTGCTCAGGGCGGGGCGGCGGAGGCTGCGGCGC
CAGGGAGCGGGGCTCGTGACAACGTGAGCAAAGACGCCAGAAGGAGCGGC
GGCGGCGGCGGCGGCGGCAGTGGCGGCGGCGGCGGCGGCGGTGGCAGTGG
CGGCGGCGGTGGCGGTGGCGGCGGCGGCGGTGAAAGCGAGAAGAGCGGCG
GAAGAAGCGGGAAGAAGAAGAAGCGCAGGAGCAGCAAGTCCGGGGAGTCC
GCGTCATCGCGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGCGCGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
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