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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1306 |
| Cds size | 699 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816789.0936894-UTR-L-elsbetiae_contig7104:6591..6884 | 1622816789.0936894-UTR-L-elsbetiae_contig7104:6591..6884 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7104 6592..6884 + |
| 1691683814.5564446-UTR-L-elsbetiae_contig7104:6591..6884 | 1691683814.5564446-UTR-L-elsbetiae_contig7104:6591..6884 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7104 6592..6884 + |
| 1622816789.11711-UTR-L-elsbetiae_contig7104:7583..7897 | 1622816789.11711-UTR-L-elsbetiae_contig7104:7583..7897 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7104 7584..7897 + |
| 1691683814.5785255-UTR-L-elsbetiae_contig7104:7583..7897 | 1691683814.5785255-UTR-L-elsbetiae_contig7104:7583..7897 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7104 7584..7897 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816789.1064491-CDS-L-elsbetiae_contig7104:6884..7583 | 1622816789.1064491-CDS-L-elsbetiae_contig7104:6884..7583 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7104 6885..7583 + |
| 1691683814.5679054-CDS-L-elsbetiae_contig7104:6884..7583 | 1691683814.5679054-CDS-L-elsbetiae_contig7104:6884..7583 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7104 6885..7583 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7104.15917.1 >prot_L-elsbetiae_contig7104.15917.1 ID=prot_L-elsbetiae_contig7104.15917.1|Name=mRNA_L-elsbetiae_contig7104.15917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
MYVPHLYHLSPLEVVPYRTQYARSCLEYVCAKETYKVSARRVVCAIYPPK
KCSKKQLNIQMAPTKSRSAHRWLFRNSKVPTSALSLRTRREQHARHVARS
YSAAAAATDTAAAALTVSCASILVALRPPKDTSTAVISRPLENWLQMLPG
DRKQKAKHSQLCSIYLLFSSPSMLPRVSSRSYIRASRNRTRINSQPQQVG
HPTRALQRMPRAENCFDGCYPLRSQTKLSHTR* back to topmRNA from alignment at L-elsbetiae_contig7104:6592..7897+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7104.15917.1 ID=mRNA_L-elsbetiae_contig7104.15917.1|Name=mRNA_L-elsbetiae_contig7104.15917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1306bp|location=Sequence derived from alignment at L-elsbetiae_contig7104:6592..7897+ (Laminarionema elsbetiae ELsaHSoW15)
CTTCGTGTGGGACGCCTGGGTCGGAACTGACAGTTGCTGTCGAGACCTGC
ATATCTATTGAGTCTTGGTCTTCGTGTGGGACGCGCTTGGCTGGAAACAA
GTCGGTTGGGGCCCCTTGCTACATATGCACGCCGCGACAATCGTCGCTGC
CGCCAAAAGTAGTGGCAGCTTTGAACCCGCCGGCCAGCCGGACAGCAAAT
AGCAGACACTAATGCGTTGATCCCGGAAATACGTATATTTTGCGATGTAT
CAACTCCTCTCCTACTTTTCTTCCCTCTTTACCCCTGCCATGTATGTACG
TACCACACCTGTACCATCTTTCGCCTTTGGAGGTGGTACCTTACCGCACT
CAATACGCCCGCTCATGCCTCGAGTATGTATGTGCTAAAGAAACTTACAA
GGTGTCTGCTAGACGCGTGGTGTGTGCTATTTACCCACCAAAAAAGTGCT
CAAAAAAACAATTAAACATACAAATGGCACCAACAAAGAGCAGATCTGCA
CACAGGTGGCTGTTCCGAAATTCGAAAGTACCGACAAGCGCCCTGTCTCT
ACGTACACGGAGAGAACAACACGCTAGGCATGTGGCGCGCTCATACTCTG
CTGCTGCCGCTGCTACGGATACTGCTGCGGCAGCACTGACGGTTTCATGC
GCATCCATCCTAGTCGCTTTGCGGCCTCCAAAAGACACCAGCACTGCTGT
CATTTCTCGACCGCTGGAAAACTGGCTCCAAATGTTGCCTGGCGATAGAA
AACAAAAAGCTAAACACTCTCAACTATGTAGCATCTATCTGTTGTTTTCT
TCCCCATCCATGCTTCCGCGTGTTTCCTCTCGCTCCTACATACGCGCGTC
CCGAAATAGGACGCGCATCAATTCACAACCTCAACAAGTAGGACACCCAA
CTAGAGCACTGCAGCGAATGCCGCGCGCTGAAAATTGCTTCGATGGATGT
TATCCTCTCCGAAGCCAAACAAAACTTAGTCACACACGCTAAAAATACTT
TTTTTTTACTTCCCCCGCCCCTTCCGCCATCAAGACAGGTCTGCCGGCAA
GATGTGGCCAACAAACAGAAAGCAGAAAACAAGCCACGACGAGACGAAAT
AAAACTGTCCCAATCGCAGCAGGTTGCAACCTGAGCGCAGCGCAATGTTA
GTACCGACGGCAAGGTACCGACGGCAGATTCGCTCTGCCGTTGGAAAGAC
CGGCCTCGCTGATGACGCACGAAATACAGAATACCCCCCCCCCCTAAAAA
AAAAAACTACCTCAACATAGCAGCGGCACGTGTAGCCGTGCTGTGGCACA
ACTTCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7104:6592..7897+ >mRNA_L-elsbetiae_contig7104.15917.1 ID=mRNA_L-elsbetiae_contig7104.15917.1|Name=mRNA_L-elsbetiae_contig7104.15917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig7104:6592..7897+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGTACCACACCTGTACCATCTTTCGCCTTTGGAGGTGGTACCTTA
CCGCACTCAATACGCCCGCTCATGCCTCGAGTATGTATGTGCTAAAGAAA
CTTACAAGGTGTCTGCTAGACGCGTGGTGTGTGCTATTTACCCACCAAAA
AAGTGCTCAAAAAAACAATTAAACATACAAATGGCACCAACAAAGAGCAG
ATCTGCACACAGGTGGCTGTTCCGAAATTCGAAAGTACCGACAAGCGCCC
TGTCTCTACGTACACGGAGAGAACAACACGCTAGGCATGTGGCGCGCTCA
TACTCTGCTGCTGCCGCTGCTACGGATACTGCTGCGGCAGCACTGACGGT
TTCATGCGCATCCATCCTAGTCGCTTTGCGGCCTCCAAAAGACACCAGCA
CTGCTGTCATTTCTCGACCGCTGGAAAACTGGCTCCAAATGTTGCCTGGC
GATAGAAAACAAAAAGCTAAACACTCTCAACTATGTAGCATCTATCTGTT
GTTTTCTTCCCCATCCATGCTTCCGCGTGTTTCCTCTCGCTCCTACATAC
GCGCGTCCCGAAATAGGACGCGCATCAATTCACAACCTCAACAAGTAGGA
CACCCAACTAGAGCACTGCAGCGAATGCCGCGCGCTGAAAATTGCTTCGA
TGGATGTTATCCTCTCCGAAGCCAAACAAAACTTAGTCACACACGCTAAA
TGTACGTACCACACCTGTACCATCTTTCGCCTTTGGAGGTGGTACCTTAC
CGCACTCAATACGCCCGCTCATGCCTCGAGTATGTATGTGCTAAAGAAAC
TTACAAGGTGTCTGCTAGACGCGTGGTGTGTGCTATTTACCCACCAAAAA
AGTGCTCAAAAAAACAATTAAACATACAAATGGCACCAACAAAGAGCAGA
TCTGCACACAGGTGGCTGTTCCGAAATTCGAAAGTACCGACAAGCGCCCT
GTCTCTACGTACACGGAGAGAACAACACGCTAGGCATGTGGCGCGCTCAT
ACTCTGCTGCTGCCGCTGCTACGGATACTGCTGCGGCAGCACTGACGGTT
TCATGCGCATCCATCCTAGTCGCTTTGCGGCCTCCAAAAGACACCAGCAC
TGCTGTCATTTCTCGACCGCTGGAAAACTGGCTCCAAATGTTGCCTGGCG
ATAGAAAACAAAAAGCTAAACACTCTCAACTATGTAGCATCTATCTGTTG
TTTTCTTCCCCATCCATGCTTCCGCGTGTTTCCTCTCGCTCCTACATACG
CGCGTCCCGAAATAGGACGCGCATCAATTCACAACCTCAACAAGTAGGAC
ACCCAACTAGAGCACTGCAGCGAATGCCGCGCGCTGAAAATTGCTTCGAT
GGATGTTATCCTCTCCGAAGCCAAACAAAACTTAGTCACACACGCTAA back to top
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