mRNA_L-elsbetiae_contig7103.15915.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: D8LK15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK15_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 7.310e-131 Identity = 259/434 (59.68%), Postives = 281/434 (64.75%), Query Frame = 1 Query: 1 MGPKKSGKKWQHHQQPKRPRHETGGXXXXXXXXXXXXXRRAAVINLGNVKGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSGEAKTHRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSEIEAFKEAAKPIVSAGLPPVAEGVPPLPVVVRATATNAAGRVATAETSGT-AGASSTGDKVEVG------GXXXXXXXXXXXXXXXXXXXXXNGTPSEKRREGSVSAGGKGIKTSDKRWKFRVDIRRRNSALNRLDLINAVVGSVGEGHSVSMSSPEVTIAIEAVKSVVGTSVLFNYALNHEYSISRLQDAVCGAILDS 1281 MGPKK KW H Q KRPR RR A INLGNVKGHQAVVGTCD+R+DRQATAELVD+LN+VADDMYP E + D+A +E +AT P A GK G DGA GA E SVEEM+++EA LRSG K HRFKSVNT+VKGVVMVCV+DPKVDILRLVD LY EIRTTKMRRSRFLERVTPLQVTAYSE++A KEA PIVS LPPVAE VPPLP VRA+ A G A GT A S+GDKV+ G XXXXXXXX EG V + G KT DKRWKFR DIRRRNS L RLDLINA VGSVG GHSV+M+SPEVTI +EAVKSVVG SVLFNYA NHEYSISRLQDAVCGAILDS Sbjct: 1 MGPKK---KWTGHYQAKRPREGEQDGNGGSGDEGPKKPRRTAAINLGNVKGHQAVVGTCDVRHDRQATAELVDMLNSVADDMYP-ETDGDDAAAE-------DAATASPVAPTPSAEGKPGNGDSDGARAXXXXXXXPAGGA-----------AEMSVEEMVKQEADALRSGSDKVHRFKSVNTSVKGVVMVCVVDPKVDILRLVDTLYDEIRTTKMRRSRFLERVTPLQVTAYSELDAIKEAVGPIVSKALPPVAEEVPPLPTAVRASGAKATGPAAVKTEKGTPAPKDSSGDKVKAAETEEKEGEGAAASAPNGTGDXXXXXXXXXXXXXXXXXEGDVVSDGNEKKTCDKRWKFRADIRRRNSGLKRLDLINAAVGSVGVGHSVNMTSPEVTIVVEAVKSVVGVSVLFNYARNHEYSISRLQDAVCGAILDS 412
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: A0A5D6XRX3_9STRA (THUMP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRX3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.540e-10 Identity = 54/205 (26.34%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 148 KGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSG--EAKTHRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSEIEAFKEAAKPIVSAGL 756 KG V+ TCD +RQ+ + +D+LN AD +PA E + GD ET A +A ++ A+ +V++ +++E LR+ + KT RF +++T VKGV+++ ++DP++ LV ++AE+ +K SRF+ R+ PL+ ++ + +E A+P+++A L Sbjct: 32 KGSGGVLVTCDKTKERQSVRDTLDVLNDAADKFFPA---------------------TEMARL-----------AGDAEETDSGATAAASSAAD-------------TVQKKLQDEINALRADAKKRKTGRFTALDTGVKGVILIQILDPEISARALVLRIFAEVEASKEFASRFISRLIPLEKIGHAARDDIRELARPMIAAQL 191
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: A0A6G0WID4_9STRA (THUMP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WID4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.120e-9 Identity = 51/201 (25.37%), Postives = 90/201 (44.78%), Query Frame = 1 Query: 148 KGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSG--EAKTHRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSEIEAFKEAAKPIV 744 KG A++ TCD +RQ +++++LN VA+ MYP TK+ A + + A K+ E++++E A L+ E T RF ++++ VKG+++V +D +D+ R+VD ++ ++ TK SRF++R+ PL+ Y +E E AKP + Sbjct: 30 KGSSALLVTCDRIKERQVVKDILNILNDVAEVMYPG--------------------------------------------TKEDTAEKSESKA-------------KTSAELLQDEIAGLKKDAKEGSTGRFAALDSGVKGIILVQFLDESMDVKRIVDHIFQQVVDTKEFASRFIQRMIPLEKLCYPSVEDIAECAKPFI 173
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: K3X3L8_GLOUD (THUMP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3L8_GLOUD) HSP 1 Score: 62.8 bits (151), Expect = 5.970e-7 Identity = 60/215 (27.91%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 118 RAAVINLGNVKGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSG--EAKTHRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSEIEAFKEAAKPIVSAGL 756 + A+ + + KG V+ TCD +RQ+ + +++LN AD +P+ T +++ GG D XXXXXXXXXXX +V++ +++E L+S + KT RF +++T VKGV+++ ++D ++ + L+ ++ E+ TK SRF+ R+ PL+ ++ + E AKP+V A L Sbjct: 26 KGALSSAASAKGSGGVLVTCDKTKERQSVRDALNILNEAADKFFPS-------------------------------TKQEADGGND---------------EXXXXXXXXXXXXXXTVQQKLQDEINALKSDAKKRKTGRFTALDTGVKGVILIQILDKEISAIALITKIFEEVEATKEFASRFINRMIPLEKLGHAAKDDILELAKPMVEAHL 194
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: A0A7S3M4F1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4F1_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 6.660e-6 Identity = 48/192 (25.00%), Postives = 88/192 (45.83%), Query Frame = 1 Query: 133 NLGNVKGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSGEAK-THRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYS 705 +L + +G+ A++GTCD +R++T EL +LL+ + + G T P + VE AE+ K + +S+E+M+R E +++S + T F S+NT +KG+V+V + + + LV +++ +I T K+ SR L R+ PLQ+ ++ Sbjct: 24 DLTSCRGYAAIIGTCDAARERESTKELSNLLSQAIERL---------------GLTAAPPSAVEEDEV---------------AESSKGS---------------------ESIEDMLRNEVMQIKSQKRTGTQDFVSINTGIKGIVLVKIARRDLCPVMLVKSIFDQISTEKVPCSRHLVRMIPLQILFFA 164
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: A0A1V9Z6J2_9STRA (THUMP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6J2_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 9.220e-6 Identity = 45/199 (22.61%), Postives = 84/199 (42.21%), Query Frame = 1 Query: 148 KGHQAVVGTCDIRNDRQATAELVDLLNAVADDMYPAEAEEDEAGSEAGGATLGPSATVEPSATGTILTGKDSGGGGDGAETKKPAASATTAGAEXXXXXXXXXXXEKSVEEMIREEAAELRSGEAKTHRFKSVNTAVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSEIEAFKEAAKPIV 744 KG+ ++ TCD +RQ +++++LN A+ YP E++ E ++ S T+A E + EE L+ + RF +++T VKG++M+ ++D K+ ++ LVD ++ E+ TK SRF++R+ PL+ + +E A P + Sbjct: 30 KGYAGILVTCDRIKERQVVKDVLNILNEAAEKYYPKYDEDN--------------------------------------EEEEEGDSKTSA-------------------EKLAEEIKGLKKDKG---RFVALDTGVKGIIMIQIVDRKIPVIALVDRIFEEVVDTKQFSSRFIQRLIPLENLCFPSVEDITTAVTPFI 168
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Match: A0A835Z5R2_9STRA (THUMP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R2_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.070e-5 Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 1042 KFRVDIRRRNSALNRLDLINAVVGSVGEGHSVSMSSPEVTIAIEAVKSVVGTSVL--FNYALNHEYSISRLQDAVC 1263 K+ V + RRNS + R +++ G V H+VS+S PE+ I +EA++ ++G SV+ ++++ RLQD VC Sbjct: 75 KWAVSLTRRNSGMQRQQVVDVFGGLVPNVHTVSLSEPEMVIVVEAMRGIIGVSVMKAATKVACSDFNLRRLQDEVC 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7103.15915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7103.15915.1 >prot_L-elsbetiae_contig7103.15915.1 ID=prot_L-elsbetiae_contig7103.15915.1|Name=mRNA_L-elsbetiae_contig7103.15915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp MGPKKSGKKWQHHQQPKRPRHETGGGDKSEEEQRPKKPRRAAVINLGNVKback to top mRNA from alignment at L-elsbetiae_contig7103:5466..7401+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7103.15915.1 ID=mRNA_L-elsbetiae_contig7103.15915.1|Name=mRNA_L-elsbetiae_contig7103.15915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1936bp|location=Sequence derived from alignment at L-elsbetiae_contig7103:5466..7401+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7103:5466..7401+ >mRNA_L-elsbetiae_contig7103.15915.1 ID=mRNA_L-elsbetiae_contig7103.15915.1|Name=mRNA_L-elsbetiae_contig7103.15915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2568bp|location=Sequence derived from alignment at L-elsbetiae_contig7103:5466..7401+ (Laminarionema elsbetiae ELsaHSoW15)back to top |