mRNA_L-elsbetiae_contig7093.15897.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7093.15897.1
Unique NamemRNA_L-elsbetiae_contig7093.15897.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: D8LFX7_ECTSI (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFX7_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 6.800e-157
Identity = 235/257 (91.44%), Postives = 245/257 (95.33%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETEMDENPARAKGRGANRIKMRRGKAAGGRR 771
            MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKG DPDEQRLEEAIGKAREAEV+R+NARTIEDDMA+ASLEELDELED+LADDGMLEKYRAQRVAEMKAKAAAA+FGEL+EISKADWVREVTD SKS CVVAHLYEDGIVECRVME  AALRSIASKFR VKFVKIRSQQAVENWPEANLPTLFIYRDG LA QL+RI+ALGGKQMKADDLEWYLASQG+VETEMDENPARAKGRGAN IKMRRG  + GRR
Sbjct:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGFDPDEQRLEEAIGKAREAEVERLNARTIEDDMAEASLEELDELEDELADDGMLEKYRAQRVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVME--AALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENPARAKGRGANSIKMRRGVKSAGRR 255
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A835YNU3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU3_9STRA)

HSP 1 Score: 270 bits (689), Expect = 4.460e-87
Identity = 143/240 (59.58%), Postives = 181/240 (75.42%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDG----MLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSA--CVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETEMDENP 702
            M +RG        +TTEW+DILI+KGI+ +D+VLR KG+DPDE RL+EA+ +ARE    R  + T+ D +A+ SL+ELD LEDD ADD     +L++ R  R+ E+KAKAA ARFG + EISK DWV EVT+ S +    VVAHLY+D +VECRVME  AALRS+A++F  VKFV+IRS QAVENWP+ANLPTLF+YR GALA QL+   ALGGK+M ADDLEWYLA QG+VETE++ +P
Sbjct:    1 MGDRGHTSVPLTDKTTEWDDILIRKGILTRDEVLRNKGVDPDELRLQEAVAEAREELAQRNASMTLTDKLAEKSLDELDALEDDFADDDGEEEILQRLRQARIVELKAKAARARFGSVIEISKGDWVAEVTEASANGDLWVVAHLYQDSVVECRVME--AALRSVAARFPEVKFVRIRSTQAVENWPDANLPTLFVYRGGALARQLITAAALGGKRMTADDLEWYLAQQGIVETELEGDP 238
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A4D9CPR5_9STRA (Phosducin domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPR5_9STRA)

HSP 1 Score: 210 bits (535), Expect = 9.710e-64
Identity = 133/286 (46.50%), Postives = 172/286 (60.14%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGID----PDEQRLEEAI-------GKAREAEVDRINARTIEDDMADASLEELD--ELEDD---LADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSA----------CVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETEMDENPARAKGRGANRI--KMRRGKAAGGRRD 774
            M +RG+  Y   GETTEWEDIL+KKGIV +  V   KG+D    PD       +        K + A      A   E    DASLE L   E EDD   L DD  + K+RA R+ E K + A  RFG + EI K DWVREVT+GSK+            VV HLY+D + +CRV+E    LR++A+KF+AVKF+KIRS  A+ENWP+ NLPTLF+YRDG L TQ++ ++ +GGK+ +A DLEW+LA  GVVETEM+E+P   +GR   R   + R G+ A G  D
Sbjct:    1 MGDRGATSYAYSGETTEWEDILMKKGIVNRAQVFGAKGLDERDFPDPAASPPPLPSSSTSHSKTQPALFSEDAAEGKEHVYQDASLEALTLAEEEDDGGALDDDAAMSKFRAARMKEWKERLATERFGSVEEIGKEDWVREVTEGSKAGGKGSGGEGGLWVVVHLYQDRVEDCRVLE--EVLRAVAAKFKAVKFLKIRSTSAIENWPDRNLPTLFVYRDGELRTQMLGLKKVGGKKAQARDLEWWLAQAGVVETEMEEDPREEEGRERRREGWRAREGRWAHGEED 284
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A8K1CU07_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU07_PYTOL)

HSP 1 Score: 181 bits (459), Expect = 2.380e-53
Identity = 108/226 (47.79%), Postives = 139/226 (61.50%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVD-RINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGV 675
            M +RG+V Y   GETTEWEDILIKKGI+              + +++E        +VD R NA          +L+ELDE+EDD  DD  LE+ R +R+AEMKA AA  +FG++  I+K +W REVTDGS    V+AHL++  + E RVME   ALR +A   R VKFV I+ +  +ENWP  N PTLF+Y  GAL  QL+ I  LGG  MKA+DLE +LAS GV
Sbjct:    1 MGDRGNVYYAPTGETTEWEDILIKKGIL------------APKTKVQEEXXXXXXVQVDPRENA----------TLDELDEMEDDFDDDKELERIRERRIAEMKAMAARNKFGDVQPITKDEWTREVTDGSSDHWVIAHLWDTAVQESRVME--EALRVVAKNHRDVKFVSIQGKACIENWPARNCPTLFMYHKGALQNQLLGIRKLGGVDMKAEDLEEHLASCGV 202
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A2D4BYU9_PYTIN (Phosducin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYU9_PYTIN)

HSP 1 Score: 177 bits (448), Expect = 1.110e-51
Identity = 102/225 (45.33%), Postives = 136/225 (60.44%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGV 675
            M +RG+V Y   GETTEWEDILIKKGI+            P  +  EE        +VD             A+L+ELDE+EDD  DD  L + R +R+AEMKA+AA  +FG++  I+K DW REVTD SK   V+A+L++  + ECR+M+    LR +A + R VKFV I++   +ENWP  N PTLF+Y +G L  QL+ I  LGG +MK +DLE +LA  GV
Sbjct:    1 MGDRGNVYYAPTGETTEWEDILIKKGILA-----------PKTKVQEEEXXXXXXQQVDPREM---------ATLDELDEMEDDYDDDMELLRIRERRIAEMKAQAARNKFGDVLPITKEDWTREVTDASKETWVIAYLWDSALQECRLMD--EVLREVAKRHRDVKFVSIQALACIENWPSRNCPTLFMYHEGELKNQLLGIRKLGGLEMKVEDLEEHLAGAGV 203
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A7S2W962_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W962_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.990e-51
Identity = 98/241 (40.66%), Postives = 156/241 (64.73%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINAR-----TIEDDMADASLEELDEL--EDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETEMDENP 702
            M +RG+  Y+  G+TTE++DIL++KGI+ K+  L  KG+  D+  + + + + +  ++   +       T +D  A+ASL ELD    ++D  D+  L +YR +R+AEMKAK A  RFG++ +I K+DW REV + SK A V+ HLY+D +  C +M+    L+ +A +FR VK ++I++  AVEN+P+ NLP LFIY +G L  QL+ + +L G + +  DLEWYLA +GV+E++M+  P
Sbjct:    6 MGDRGNKAYEFSGQTTEFDDILMRKGIITKEQALLAKGMGVDQ--VADILVRDKLEDMGFFDQEPPPEPTKQDRAAEASLAELDXXXXDEDFDDESFLAEYREKRLAEMKAKQATLRFGQVQDIQKSDWTREVNEASKEAWVLCHLYDDQLEACGLMD--NLLKDVARRFRGVKCLRIKATSAVENFPDRNLPALFIYHEGTLQHQLITLASLHGLRARPQDLEWYLAERGVLESDMEGAP 242
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: W4GCF5_9STRA (Phosducin domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GCF5_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.100e-51
Identity = 101/222 (45.50%), Postives = 136/222 (61.26%), Query Frame = 1 
Query:   10 RGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGV 675
            RGS  Y   GETTEWEDILIKKGI+                       K +  E +   +    D   DA+L+ELDE+ED+  +D  L++ R +R+AEMKA+ A   FG++  ISK +W REVT+ SK + VVA+L+E+ +  C++M+    LR IA + R VKFV I+SQ  VENWP  NLPTLFIY+DG LATQ++ +  L G   + +D+E YLA QGV
Sbjct:    3 RGSKLYVGTGETTEWEDILIKKGII---------------------APKTKVTEEEDYESEDDVDPREDATLDELDEMEDEYDEDQALQRIRDKRIAEMKAQMARNVFGDIQPISKDEWTREVTEASKGSWVVAYLWENSVEACKLMD--QILRVIAGRHRDVKFVSIQSQVCVENWPLRNLPTLFIYKDGNLATQMLTLSKLKGLNTRVEDVEEYLAEQGV 201
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: W2GHT6_PHYPR (Phosducin domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2GHT6_PHYPR)

HSP 1 Score: 173 bits (438), Expect = 3.550e-50
Identity = 99/229 (43.23%), Postives = 137/229 (59.83%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETE 687
            M +RG+V Y   GETTEWEDIL+KKGI+      + K  D +EQ     +                 D   +A+L+ELDE+EDD  DD  L + R +R+ EM A+AA  +FG++  I+K +W +EVT+GS    V+A+L++D + EC+VM+    LR +A K R VKFV I++Q  +ENWP  N PTLF+Y  GAL  QL+ I  L G  MK +DLE YLA   V + +
Sbjct:    1 MGDRGNVYYAPTGETTEWEDILVKKGIL----APKTKVPDEEEQXXXXQV-----------------DPRENATLDELDEMEDDYDDDAELARIRERRIQEMMAQAARNKFGDVQPIAKDEWTKEVTEGSNDHWVIAYLWDDALEECKVMD--HVLREVAKKHRDVKFVSIQAQACIENWPARNCPTLFMYHKGALKNQLLGIRKLNGLDMKVEDLEEYLAKADVFKAD 206
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A0P1A7I8_PLAHL (Conserved phosducin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7I8_PLAHL)

HSP 1 Score: 166 bits (421), Expect = 1.240e-47
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGV 675
            M +RG+V Y   GETTEWEDIL+KKGI+            P  + +EE     +E E + ++ R       +A+L+ELDE+EDD  DD  LE+ R +R+ EMK +A+  +FGE+  I+K +W   VT+GSK   V+A+L+++ + E ++M+    LR +A + R VKFV I++Q  +ENWP  N PTLF+Y  G+L  QL+ I  L G  MK +DLE YLA   V
Sbjct:    1 MGDRGNVYYAPTGETTEWEDILVKKGILA-----------PKTKVIEE-----KEEEEEFVDPRE------NATLDELDEMEDDYDDDAELERIRERRIQEMKEQASRNKFGEVEPIAKNEWTTVVTEGSKDHWVIAYLWDEALEESKIMD--HVLREVAKRHRDVKFVSIQAQACIENWPSRNCPTLFMYHKGSLQNQLLGIHKLNGLDMKVEDLEEYLAQADV 201
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BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Match: A0A3M6VTA9_9STRA (Phosducin domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VTA9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.550e-47
Identity = 98/229 (42.79%), Postives = 133/229 (58.08%), Query Frame = 1 
Query:    1 MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAIGKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVAEMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVMEASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQLVRIEALGGKQMKADDLEWYLASQGVVETE 687
            M +RG+V Y   GETTEWEDIL+KKGI      L  K   PDE   E                    D   +A+L+EL+E+EDD  DD  L + R +R+ EM A+A+  +FG++  ISK +W +EVTDGS    V+A+L+++ + EC+VM+    LR +A K R VKFV I++Q  +E WP  N PTLF+Y  G L  QL+ I  L G  MK+ DLE YLA   V + +
Sbjct:    1 MGDRGNVFYAPTGETTEWEDILVKKGI------LAPKTKVPDETEEEXXXDV---------------DPRENATLDELEEMEDDYDDDAELARIRERRIQEMMAQASRNKFGDVQCISKDEWTKEVTDGSSEHWVIAYLWDEALEECKVMD--HVLREVAKKHRDVKFVSIQAQACIEKWPSRNCPTLFMYHKGVLQNQLLGIRKLNGLDMKSQDLEEYLAKANVFQVD 206
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7093.15897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFX7_ECTSI6.800e-15791.44Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YNU3_9STRA4.460e-8759.58Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A4D9CPR5_9STRA9.710e-6446.50Phosducin domain-containing protein n=1 Tax=Nannoc... [more]
A0A8K1CU07_PYTOL2.380e-5347.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BYU9_PYTIN1.110e-5145.33Phosducin-like protein n=1 Tax=Pythium insidiosum ... [more]
A0A7S2W962_9STRA5.990e-5140.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4GCF5_9STRA6.100e-5145.50Phosducin domain-containing protein n=3 Tax=Aphano... [more]
W2GHT6_PHYPR3.550e-5043.23Phosducin domain-containing protein n=14 Tax=Phyto... [more]
A0A0P1A7I8_PLAHL1.240e-4742.67Conserved phosducin-like protein n=1 Tax=Plasmopar... [more]
A0A3M6VTA9_9STRA2.550e-4742.79Phosducin domain-containing protein n=4 Tax=Perono... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7093contigL-elsbetiae_contig7093:2575..8165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.1
Seed ortholog evalue1.4e-123
Seed eggNOG ortholog2880.D8LFX7
Preferred namePDCL3
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001936,GO:0001938,GO:0003674,GO:0003779,GO:0005102,GO:0005126,GO:0005172,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006457,GO:0006725,GO:0006807,GO:0007329,GO:0008092,GO:0008150,GO:0008152,GO:0008284,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009371,GO:0009373,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010941,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019236,GO:0019438,GO:0022603,GO:0030162,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031399,GO:0031683,GO:0032268,GO:0032269,GO:0034404,GO:0034641,GO:0034654,GO:0042127,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042455,GO:0042981,GO:0043067,GO:0043184,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043281,GO:0044183,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045765,GO:0045766,GO:0045861,GO:0045893,GO:0045935,GO:0045944,GO:0046019,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050678,GO:0050679,GO:0050730,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051336,GO:0051716,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0065007,GO:0065009,GO:0070851,GO:0070887,GO:0071310,GO:0071444,GO:0071704,GO:0080090,GO:1901135,GO:1901137,GO:1901342,GO:1901360,GO:1901362,GO:1901522,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902680,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1904018,GO:2000026,GO:2000058,GO:2000059,GO:2000112,GO:2000116,GO:2001141
EggNOG free text desc.queuosine biosynthetic process
EggNOG OGsKOG3170@1,KOG3170@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPhosducin, thioredoxin-like domain
Ec32 orthologEc-05_005120.1
Exons7
Model size819
Cds size819
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.014568-CDS-L-elsbetiae_contig7093:2574..27631622816787.014568-CDS-L-elsbetiae_contig7093:2574..2763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 2575..2763 -
1691683812.968793-CDS-L-elsbetiae_contig7093:2574..27631691683812.968793-CDS-L-elsbetiae_contig7093:2574..2763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 2575..2763 -
1622816787.0312967-CDS-L-elsbetiae_contig7093:3835..38961622816787.0312967-CDS-L-elsbetiae_contig7093:3835..3896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 3836..3896 -
1691683812.9821413-CDS-L-elsbetiae_contig7093:3835..38961691683812.9821413-CDS-L-elsbetiae_contig7093:3835..3896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 3836..3896 -
1622816787.0425043-CDS-L-elsbetiae_contig7093:4430..45401622816787.0425043-CDS-L-elsbetiae_contig7093:4430..4540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 4431..4540 -
1691683812.9966705-CDS-L-elsbetiae_contig7093:4430..45401691683812.9966705-CDS-L-elsbetiae_contig7093:4430..4540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 4431..4540 -
1622816787.0530868-CDS-L-elsbetiae_contig7093:5781..59561622816787.0530868-CDS-L-elsbetiae_contig7093:5781..5956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 5782..5956 -
1691683813.0130467-CDS-L-elsbetiae_contig7093:5781..59561691683813.0130467-CDS-L-elsbetiae_contig7093:5781..5956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 5782..5956 -
1622816787.0668855-CDS-L-elsbetiae_contig7093:6796..69301622816787.0668855-CDS-L-elsbetiae_contig7093:6796..6930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 6797..6930 -
1691683813.0255592-CDS-L-elsbetiae_contig7093:6796..69301691683813.0255592-CDS-L-elsbetiae_contig7093:6796..6930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 6797..6930 -
1622816787.0802162-CDS-L-elsbetiae_contig7093:7548..76411622816787.0802162-CDS-L-elsbetiae_contig7093:7548..7641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 7549..7641 -
1691683813.0436516-CDS-L-elsbetiae_contig7093:7548..76411691683813.0436516-CDS-L-elsbetiae_contig7093:7548..7641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 7549..7641 -
1622816787.0905275-CDS-L-elsbetiae_contig7093:8108..81651622816787.0905275-CDS-L-elsbetiae_contig7093:8108..8165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 8109..8165 -
1691683813.0568354-CDS-L-elsbetiae_contig7093:8108..81651691683813.0568354-CDS-L-elsbetiae_contig7093:8108..8165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7093 8109..8165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7093.15897.1prot_L-elsbetiae_contig7093.15897.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7093 2575..8165 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7093.15897.1

>prot_L-elsbetiae_contig7093.15897.1 ID=prot_L-elsbetiae_contig7093.15897.1|Name=mRNA_L-elsbetiae_contig7093.15897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MAERGSVQYQSKGETTEWEDILIKKGIVEKDDVLRGKGIDPDEQRLEEAI
GKAREAEVDRINARTIEDDMADASLEELDELEDDLADDGMLEKYRAQRVA
EMKAKAAAARFGELYEISKADWVREVTDGSKSACVVAHLYEDGIVECRVM
EASAALRSIASKFRAVKFVKIRSQQAVENWPEANLPTLFIYRDGALATQL
VRIEALGGKQMKADDLEWYLASQGVVETEMDENPARAKGRGANRIKMRRG
KAAGGRRDDSDEDEDDDRAGDY*
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mRNA from alignment at L-elsbetiae_contig7093:2575..8165-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7093.15897.1 ID=mRNA_L-elsbetiae_contig7093.15897.1|Name=mRNA_L-elsbetiae_contig7093.15897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5591bp|location=Sequence derived from alignment at L-elsbetiae_contig7093:2575..8165- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGAGCGGGGATCAGTGCAGTACCAATCCAAGGGCGAGACAACAGA
ATGGGAGGTGAGGTTTTTTTGTTGTGTTTACGTGTGAACTACTGCTGTGA
ACAGCAGTCAAGACAGCATCAGTACACGTCACTACCTAATGTTCTCGTTC
GACACCCCGCGTGGGTTGTGTGCAGCTGCGTCTTAAAAAGGACCCTCACA
CATAAAACAAATATGTCTCGAGATGATAGACCTGCCTTTGTGAAACTCGG
TCCTCCGCTTTCCTCGCCTTGGACCTTTGACACGGCTGTTTTATGTTTTT
TCCGTCACTGTTGTTGTAAATATGGAAATACCGTTTGAATCCCATATCGA
GTCCTTGCTCTGGTGTGGGTTTAGGTTCCATTTTTGATTCATTGTTTATT
TTTTTTAAAAAGGGCGTTCATTAAAACCCACCCCTCGTTGTCGCTGTGCC
TGATCGAAACAGTCTGGACGGAAACGCAATAAATATCACTGCGCTGCTGT
ACTCCGTGTATATATCAAAAACAGGACATCTTGATCAAGAAGGGCATCGT
CGAGAAGGACGACGTTCTGCGAGGGAAGGGAATCGACCCCGACGAGCAGC
GCTTGGAGGAGGCCATCGTGAGTCCCCCCCGCCTTGGAGAGAAATGGCAC
TGAGGACTGTTGTCGTCGCTGCTACCGTTGCTGCCGTCGTTGCTGCTACC
GTTGCTGCTGTCGTTGCTGCTACTGCTGCTGCTACTGCTGCTGCTGCTGT
CGTTGCTGCTACTGCTGTCGTTGACAGCAGCTACCGTTGCTGCTACCGTT
GCTGCTACTGTTGCTGCTACCGTTGCTGCTGCCGTCCCGCTGCTACTGCT
GCTGCTGCCACTGCTGCAGCAGTGTTAAAAAAAGAAATCAATGAATAAAC
AAATGGAACCTATTAGCCCACATGAGAGCCAAGACTCCGTGGTTTTTTAT
TGCAGCAGTGCTGTTGTATGTAGCGCCCAAACCACCTTCCGTGTTGCTGC
ATAAAAAGTGCCATACATACATGAGGGTGGAACTCCACCGTACATGTCTA
AAGTAGGATGCATATGTACGCGCAGCGTAGGAACATCTGCAAACTAGGCT
TACAGCAGCCATGGGATATGTAGCTTGGGAACCCGCAGGCGACAAAACAT
CGACACCACACACCATCTCCGCTGCATACCAACCCTTCTCCCACACCGAC
CCGTGAACCACGACAACAACAACCGCCGCGGCCAGGGCAAGGCTAGGGAG
GCGGAGGTGGACCGGATAAACGCGAGGACGATCGAGGATGACATGGCGGA
CGCCAGCCTGGAGGAGCTGGACGAGCTCGAAGACGATCTCGCCGACGACG
GCATGCTGGAGAAGTACAGGTATTTTTTACTGCTGCTCTGCATATGTACA
TACGTACCCGCCATTTTGTTTGTTTGTGTGTATGGCTCCACTTGTTTTCA
TAATCTTTATTTTTTCTTGCGGATACCCACACGTTTTGAAACTTAAGCGT
TGTTGTTGCTGTTGTTGTTGCTGTTGCTGTTGCTATAGTTGTTGTGGTTG
TTGTTGTGGTTGCTGTTGTCGTTGTTGCTGTAGTTGTTGTCTGTTGTTGT
TGTTGCTGCTGCTACTGCTGTTGCTATTGTTTTTGTTGCTGATGCTGCTG
TTGCTGTTGTTAAATATCACAATAAAAATCCTTCCGATCTCTCTATCCAG
TACCTTCATGTATCCGTACTCGTCCAACTGTCACAGGCTAACTTGCCTAT
AAAAAGGTATACCGAAAGTGATCCCAAGAGGGTCGACAAGGCAATGTGAT
CAAGCCACCGTGTGCATTTACATGAAAATTGATATAAGAACAAGGAAGGT
GCGTAAAAAAAAAAAAAAAAAAGAGTTTTCGATCGGCCCGAGTGTCGTCT
GCGGCTAAATACATATACATGCCACTGCTGCCTGCCGCGGCGCCGAGCGT
GCGAAAGATGCTCACATTTGCCGGACCATATTCCGCCGCACACGAGTAAA
TACATGTCACACGGCAAGCACTACATAAAATCCTCCGCGGCAACAACGTC
TGCCCAGATTTAAATTCCGCACGTGGGCACGCGGGCACTCACTCACTAAC
TCACTCACTAATTCACTCACGGGGCTCCTCTGGCAAACCGTAAATACATC
AACAACGGAACAAACACCGCGCGGGGGGGCGGGGTGCGGGGGGCAAACAA
AACCTTTAGGGCGCAGCGTGTGGCCGAGATGAAGGCCAAGGCGGCGGCCG
CGAGGTTCGGGGAGTTGTACGAGATCTCGAAGGCGGACTGGGTGAGGGAG
GTGACGGACGGCAGCAAGAGCGCCTGCGTGGTGGCGCACCTCTACGAGGA
CGGCATCGTCGAGTGCCGCGTCATGGAGGCGAGTGTGTGTTTGGCGGTGG
TGGTGGTTGTGGTGGGATCGTCGCGTTGTTGTTGCTGTTAGTATCTTGTC
TGACATTCAGCTTTTATGTTTGAAACGCGCGCGCGCGCACCACGCGGGGG
TGTCGTGTTTTTTTTTTTTTTTTTTTTAATAATTTCTTACGGATTACCAG
CAGCGGTTGGACGAGGGTCCGAGAAAAATTAGAAGCAGCGCACCATTTTG
GTCGCTGCGTAGTAACCTGCAGTGGTATGTTTTCTGTTTCTATATACCAG
TGTGCTGTGTCTGCGTCTATCCTGGGCACAGGTACAGAGTGATAGCTCAG
AGTGACAGCCCCCCCCCTACTTTGTTTTCATTTTTTCATTTTGCTCGTTT
TTATCTGCCCTGCAATAAGGTGTGACCACGGTTCGGTACTCTTTTGGCAA
AATGTCCTTTTCGCGTGGCAAGGAGCCTCTGGTGCTGGCAGTAGATGTGA
AGATTAAAAAAAGAAAGAAATATAAAAAAAGGTAGATAGGTACCAACCCC
GTGTGTCATTTTTGTCCTCCTGTCTCAGCTACCGACCGTGCTGTCACAGG
TCAAGCCAAGTCCGTCGGTAGGTACAGTAGGCTGTGCCAAGATATGCAAC
TGCTAAGCAGCGGACCCTGTGATGCCACTACTCTGTATCGGCCGACAACC
TGTGTACAAAAAGGAGACATTGCCGAGGCGTGCATGTTGTGCCGCACCGG
TCGTCACTCTTGTGTCAGACCAATACATAGTGCGCACCAACGACACGACT
TGCTCATAATTCATTTATGTTTAAAACCTCTCTGCTGTAATACGTTTATA
CGTAGGTCGTAAGCTTTTACCCTTTTCTCCTCCAACCGTAAAAACGGTTG
TTTGAAAATAAATCAGGAAATCGAAGGAAGAACCCTCCAACATTAGAGAC
GGGGCTCCGTGTTGAATTAACAATTCAATACCGCAGTAGTGGCGTCATAT
TGGTCCAGCCGAGAAGGTACAAAAACACCTATACAATATTAGAAAAGTTC
AAAACCTCCCCAACATAACTTACTCTGCCGGGTCAACATGCTAATATTCC
GGGGAGAAAACACACAGGAGGAGGGGGGGGTCGGACCCCCTCCTACGGTG
CCTGCCTGTGATGTTTTTATCGCGAGCAGGGTTTAGCACTCCCCACCCTC
GTCAACAATGAAGTCGAAGTATTACTCCTATTTGCTAACGTGTGTGTGTG
TGTGTGTGTGTGTGTGTCCGAGCAGGCTGCCTTGCGGTCAATAGCGAGCA
AGTTTCGAGCGGTAAAGTTCGTCAAGATCAGAAGCCAGCAGGCGGTGGAG
AACTGGCCGGAGGCGAACCTTCCCACTCTCTTCATGTGCGTCTAATTGCT
GCTGTTGGAACTCTGTTACTGCTGTGTGTGGGGGTTCCAGCTACTGCTGC
TGCTGTTCTTGCTGTTGAATTGCGGCGCTCTGAGACAATGGTGGGCGAGC
GCAATGGTTGTGCCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGC
AGCACGAATTCATTTCTGTACACGCACACACACGCGTGGAACATAGGTGT
CTAGACTAGAGAGCGAGCCTTGAACCGCTTTTTGCCCAGCCGCGTTGCTC
TTCTCGCTGTTGTCGCATGTCTTTCCTTGTCGAGCAGACTGGCGAAACGC
ATGCTGTCGTGCGATTCCCTCCTCAGGGCACCTAGTCAACTAGAGCAAGC
AACGAACAAACTTGATACTCTCCCCTCCGCCCAAAGGCTAAATCAGCTTA
AAAAATCAAGTAACAACCTTTGACACTCTTTCCCTCTGCCCCGTCTCATG
CCTGTTCTCGCACACGAACTGCACACCGCCTCCCGGCTTATCGCGGGTCA
CGCTTTCGCCTTGGAGCAGTTATCGCGATGGAGCGTTGGCGACGCAGCTT
GTCCGGATCGAGGCACTGGGAGGGAAGCAGGTGACCGGACAACAGTCGTG
GGAGAGTGTTGGGTGGTACTAGGCACTCGATACTGTCGATGGGATCTTTG
GGGGATACGTGGATGAATGGGGGTTTCGTGTATCCGCGGGACTGTGCGGT
CGCACGTGTGGGAGTGGTGCTCTCGCTGCACTGCTCTCTGTCGATACCAA
GGAATTGAGTCAAACTATCTACACTCCGGCCTCAGACAAAGACCCCCGCT
ACCAAACACGATATACCGAGCGCGGTGGCGCGAGGGGAGGTTTTGGCTTT
GGAGTTTGCAGGAGGGAAGCAGGTGCGCGGACAGCAGTCGTGGGAGAACA
CGGGTTGATTCGGCTTGCATTGCGATCTTGGTCACCTGGGAAGTTCGGGG
CTCGCGGGTCGTGCTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTGTTGTT
GTCGTTGTGTTGTTGTTGGTGGTGGTGCGTTGATGTTGTCGTTGTTTTTG
TTTTATTGAAATTTGGTGTCGTCGTCGTCGGTGTCGTTGTTGTTGCTGCT
GCTGCTGCTGCTGCTGTTTAGGCAAGGAAGGCTGCGGCTTCCCACCGGTA
ACCCTTCCCATCATCCCGTTTGTGTTCATCCAACAAGCGGGAGAGAGAGA
GACGGGATGGCCGCGACTTTTGTATATTTCCTCCTCTCGCGCCCGCCGAC
TCTCGCCTGCTGGCCATGTGTGCGTTGCCGTCTATTTTTTGTTTGGTTTT
GGCTGCGCCCCACGCTCCTTCTTCTTGCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCACCCAGCCAAACCCCAAACACAAA
ACACCACCAACCACNNNNNNNNNNCCCCCCCTCTCCCCTTCCTCTTTTTT
TTTTTTTTTTTTGGTTGCCCCCCCCCCCCCCCCTCTCCCCCCCCCCCCCC
CCCCCCCCCTTCTCTCCCTCTCTCTCTCTGAACTCGAATGAAGCCAACCG
ATACATACATACCAAGCAACACCACTTTTTAATAGCAACACGAGGCACTA
AAAGGAACACCGATTATACTCTGTCTGTACTTGCTGTATCCACAACATGC
AGATGAAGGCAGACGACCTGGAGTGGTACCTGGCCTCACAGGGTGTTGTC
GAGACCGAGATGGACGAGAACCCGGCGAGAGCGAAGGGGAGGGGGGCCAA
CCGCATCAAGATGCGCCGGGGGAAGGCTGCGGGGGGTAGAAGGGACGACT
CGGACGAAGACGAAGATGATGATCGCGCCGGGGATTACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7093:2575..8165-

>mRNA_L-elsbetiae_contig7093.15897.1 ID=mRNA_L-elsbetiae_contig7093.15897.1|Name=mRNA_L-elsbetiae_contig7093.15897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig7093:2575..8165- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGAGCGGGGATCAGTGCAGTACCAATCCAAGGGCGAGACAACAGA
ATGGGAGATGGCCGAGCGGGGATCAGTGCAGTACCAATCCAAGGGCGAGA
CAACAGAATGGGAGGACATCTTGATCAAGAAGGGCATCGTCGAGAAGGAC
GACGTTCTGCGAGGGAAGGGAATCGACCCCGACGAGCAGCGCTTGGAGGA
GGCCATCGACATCTTGATCAAGAAGGGCATCGTCGAGAAGGACGACGTTC
TGCGAGGGAAGGGAATCGACCCCGACGAGCAGCGCTTGGAGGAGGCCATC
GGCAAGGCTAGGGAGGCGGAGGTGGACCGGATAAACGCGAGGACGATCGA
GGATGACATGGCGGACGCCAGCCTGGAGGAGCTGGACGAGCTCGAAGACG
ATCTCGCCGACGACGGCATGCTGGAGAAGTACAGGGCAAGGCTAGGGAGG
CGGAGGTGGACCGGATAAACGCGAGGACGATCGAGGATGACATGGCGGAC
GCCAGCCTGGAGGAGCTGGACGAGCTCGAAGACGATCTCGCCGACGACGG
CATGCTGGAGAAGTACAGGGCGCAGCGTGTGGCCGAGATGAAGGCCAAGG
CGGCGGCCGCGAGGTTCGGGGAGTTGTACGAGATCTCGAAGGCGGACTGG
GTGAGGGAGGTGACGGACGGCAGCAAGAGCGCCTGCGTGGTGGCGCACCT
CTACGAGGACGGCATCGTCGAGTGCCGCGTCATGGAGGCGAGTGGCGCAG
CGTGTGGCCGAGATGAAGGCCAAGGCGGCGGCCGCGAGGTTCGGGGAGTT
GTACGAGATCTCGAAGGCGGACTGGGTGAGGGAGGTGACGGACGGCAGCA
AGAGCGCCTGCGTGGTGGCGCACCTCTACGAGGACGGCATCGTCGAGTGC
CGCGTCATGGAGGCGAGTGCTGCCTTGCGGTCAATAGCGAGCAAGTTTCG
AGCGGTAAAGTTCGTCAAGATCAGAAGCCAGCAGGCGGTGGAGAACTGGC
CGGAGGCGAACCTTCCCACTCTCTTCATGCTGCCTTGCGGTCAATAGCGA
GCAAGTTTCGAGCGGTAAAGTTCGTCAAGATCAGAAGCCAGCAGGCGGTG
GAGAACTGGCCGGAGGCGAACCTTCCCACTCTCTTCATTTATCGCGATGG
AGCGTTGGCGACGCAGCTTGTCCGGATCGAGGCACTGGGAGGGAAGCAGT
TATCGCGATGGAGCGTTGGCGACGCAGCTTGTCCGGATCGAGGCACTGGG
AGGGAAGCAGATGAAGGCAGACGACCTGGAGTGGTACCTGGCCTCACAGG
GTGTTGTCGAGACCGAGATGGACGAGAACCCGGCGAGAGCGAAGGGGAGG
GGGGCCAACCGCATCAAGATGCGCCGGGGGAAGGCTGCGGGGGGTAGAAG
GGACGACTCGGACGAAGACGAAGATGATGATCGCGCCGGGGATTACTGAA
TGAAGGCAGACGACCTGGAGTGGTACCTGGCCTCACAGGGTGTTGTCGAG
ACCGAGATGGACGAGAACCCGGCGAGAGCGAAGGGGAGGGGGGCCAACCG
CATCAAGATGCGCCGGGGGAAGGCTGCGGGGGGTAGAAGGGACGACTCGG
ACGAAGACGAAGATGATGATCGCGCCGGGGATTACTGA
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