mRNA_L-elsbetiae_contig7073.15878.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: D8LCP4_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP4_ECTSI) HSP 1 Score: 742 bits (1916), Expect = 6.630e-260 Identity = 393/678 (57.96%), Postives = 481/678 (70.94%), Query Frame = 1
Query: 1 MFEHMPKSGMLAAAMQGKLSLPADECLRSVVMLKHYTSVSFGRLLVLAGRKLRLSEAHFEAALEAIISNSGLMLAPNLQQEQVAMFHTLGLAPVRRALSFPLDPL--DTRRVVLLVPKSGILLLRAFRQSELYLALAGKIQSFDNHYVSVHKVFVKVRRGNKHDQDDGHDGWRALSSHLMVRDTTEDDPEAELMASALVPTFALMMAPPALTNLELRPRDSAEIFKAPKDIMKKLGGVFTKVFYGADLADVNKTAILTPGETGDLVKGGVAHHPRLACPEGAVTTRHEQDSSRSLTSQPVGKCSSGAAIMHRFMHGGAAVDQSVELINQVGGGKA-AGLLYRVTLSMASAEARERLAEGGAPAIEKTLDPCTVRVKLGGGMSHETSFPFSVRWSSIEMKYSKHQGYVLFTVPPISAGGAKFPFAWTAYDIEGVGRRVLPSTPAWSSCPPLASLPRLDFKAEWTNSKVMGGLSFTPAERSSREQTPKSKDRNVNSAFLGLKETILAIASTTCTRHVEERSSLWKHPWVCISENMQDDEPAIWVWVNEILLDSSNEALILDCCVMPVGQMCGAVSTQLGAAVEIDQIRGDGAGRTVFKVMVHPGEMTLWESLLPVAVERARQTYSHTAECAYTTPGDPGWTLCSCGEGKDLPSAFEESMKQVNAFGSL-VHPLFYRAALS 2022
MF HMPK+ M A K PA+E LRS M K+YTSVSFGRLL LAGR+LRL AHF + L AII+NSGL+LAPNLQQEQ+A+FH LGL P+R+ P+ P+ D RR+VLLVPKSG+ LLR F Q ELYLALAG ++ F+N +VSVH FV+VRRG+K+ + DGWR+L+SHLMVRDT E PEAELM SA+VP+FALMMAPPA T L+LRPRD E+++APKD++++LGG F K F+ A L + +KTA+L PG TG ++ GGV+ R +CP+ D S G+C S A HRFMHG AA+DQ+VEL+ Q G A L+YRVTL MA+ EARE LA GGAP +E DPC+V+V LG G+SH S PF + ++ +YSK QGYV++TVPPI P AW DI+GVGR VLPS P+WS PL+SLPRLDF+AEW + KVMGG SFTPAERS RE P ++ LGLKE ILAI ST C H E +S WKHPW+CI+EN +DDEPA+WVWVNEILLDS+NEALILDCCVM +M A S QLG A+E+++I+G GAG K + GE+ LW SLLP AVERARQTY+HTA+C Y+TPG G TLCSCG GKDLP F ESM+ A G + +H F+RAALS
Sbjct: 1 MFGHMPKTSMTATR---KFDRPANEVLRSATMPKYYTSVSFGRLLSLAGRRLRLRVAHFHSVLGAIINNSGLILAPNLQQEQIAVFHALGLVPIRQHFG-PMLPIPGDLRRLVLLVPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTAFVRVRRGSKYRGQEDLDGWRSLNSHLMVRDTREQAPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEMYRAPKDVLRRLGGYFNKHFFKATLGNADKTAVLIPGATGGILHGGVSTR-RFSCPDRVACP----DRDLLRPSPRTGRCLSKAVDTHRFMHGDAAIDQTVELVEQAGSNSGDARLVYRVTLVMANDEAREGLAAGGAPVLETLHDPCSVQVALGEGLSHAVSLPFPIERRRVQREYSKRQGYVIYTVPPIRLP-LNLPLAWIGLDIKGVGRAVLPSMPSWSPAVPLSSLPRLDFQAEWAHEKVMGGFSFTPAERSMREGLPTPNSEIIDPVILGLKEEILAIISTACDHHEEAHASSWKHPWMCITENRRDDEPALWVWVNEILLDSTNEALILDCCVMLADRMDSAASIQLGTALELEEIQGRGAGIRFSKAV--SGEVALWGSLLPAAVERARQTYAHTADCIYSTPGYSGRTLCSCGMGKDLPPGFVESMRSAKAPGLVPLHTCFHRAALS 666
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE) HSP 1 Score: 680 bits (1754), Expect = 7.500e-230 Identity = 380/704 (53.98%), Postives = 464/704 (65.91%), Query Frame = 1
Query: 1 MFEHMPKSGMLAAAMQGKLSLPADECLRSVVMLKHYTSVSFGRLLVLAGRKLRLSEAHFEAALEAIISNSGLMLAPNLQQEQVAMFHTLGLAPVRRALS--FPLDPLDTRRVVLLVPKSGILLLRAFRQSELYLALAGKIQSFDNHYVSVHKVFVKVRRGNKHDQDDGHDGWRALSSHLMVRDTTEDDPEAELMASALVPTFALMMAPPALTNLELRPRDSAEIFKAPKDIMKKLGGVFTKVFYGADLADVNKTAILTPGETGDLVKGGVAHHPRLACPEGAVTTRHEQDSSRSLTSQPVGKCSSGAAIMHRFMHGGAAVDQSVELINQVGGGKA-AGLLYRVTLSMASAEARERLAEGGAPAIEKTLDPCTVRVKLGGGMSHETSFPFSVRWSSIEMKYSKHQGYVLFTVPPISAGGAKFPFAWTAYDIEGVGRRVLPSTPAWSSCPPLASLPRLDFKAEWTNSKVMGGLSFTPAERSSREQTPKSKDRNVNSAFLGLKETILAIASTTCTRHVEERSSLWKHPWVCISENMQDDEPAIWVWVNEILLDSSNEALILDCCVMPVGQMCGAVSTQLGAAVEIDQIRGDGAGRTVFKVMV--------------------HP-------GEMTLWESLLPVAVERARQTYSHTAECAYTTPGDPGWTLCSCGEGKDLPSAFEESMKQVNAFGSLVHPLFYRAALS 2022
MF HMPK+ MLA+ K LPA+E LRS +LK+YTSVSFGRLL LAGR+LRL AHF++ L AII NSGL+LAPNL QEQ+A+FH LGLAP+R+ + FP+ P D RRVVLLVPK+G+ LLR F Q ELYLALAG ++ F+N +VSVH VFV+VRRG K + DGW +L+SHLMVRDT E DPEAELM SA+VP+FALMMAPPA T L+LRPRD E+F+APK ++++LGG F K F+ A L + +KTA+L PG TGD++ GGV+ PR +CP+ +Q+SSR S P+G+ A HRFMHG AA+DQ+VEL+ Q G A L+YRVTL MA+ EAR+ LA GGAP +E DP +VRV LG G+ H T PF + ++M+YSK QGYV++TVPP+ FP AWT DIEGVG+ VLPS P WS PL+SLPRLDF+AEW + K E ILAI ST C H E +S WKHPW+CI+EN +DDEPA+WVWVNEILLDS+NEALILDCCVM +M A S LG A+E+D I+G GA KV + HP G + LW SLLP AVERARQTY+HTA+C Y TPG G TLCSCG GKDLP F ESM+ + F+RAALS
Sbjct: 418 MFGHMPKTSMLASR---KFHLPANEALRSATLLKYYTSVSFGRLLSLAGRRLRLRVAHFDSVLGAIIDNSGLILAPNLMQEQMAVFHALGLAPIRQPIGAMFPI-PRDLRRVVLLVPKAGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGKCRGQEDLDGWSSLNSHLMVRDTREQDPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEVFQAPKSVIRRLGGYFKKHFFKATLDNADKTAVLIPGATGDILHGGVSR-PRFSCPDRVACP--DQNSSRP--SPPMGRGLRKAVDTHRFMHGDAAIDQAVELVQQAGSTSGDARLVYRVTLVMANDEARQCLAAGGAPVLETLHDPFSVRVALGEGLGHATGLPFPIEQRRVQMEYSKRQGYVIYTVPPVRQP-LNFPLAWTGLDIEGVGKAVLPSMPFWSPAVPLSSLPRLDFQAEWAHQK----------------------------------EEILAIISTACEHHDEAHASSWKHPWMCITENRRDDEPALWVWVNEILLDSTNEALILDCCVMLADRMDSAASILLGTALELDIIQGRGAHIRFPKVSIVLVVSAQHSLLSAASFCCDIHPVFVKAVSGGVALWGSLLPAAVERARQTYAHTADCIYPTPGYSGRTLCSCGMGKDLPPGFVESMRSAKLVP--LQTCFHRAALS 1075
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 1.030e-199 Identity = 346/669 (51.72%), Postives = 440/669 (65.77%), Query Frame = 1
Query: 43 MQGKLSLPADECLRSVVMLKHYTSVSFGRLLVLAGRKLRLSEAHFEAALEAIISNSGLMLAPNLQQEQVAMFHTLGLAPVRRA-LSFPLDPLDTRRVVLLVPKSGILLLRAFRQSELYLALAGKI--QSFDNHYVSVHKVFVKVRRGNK-HDQDDGHDGWRALSSHLMVRDTTEDDPEAELMASALVPTFALMMAPPALTNLELRPRDSAEIFKAPKDIMKKLGGVFTKVFYGADLADVNKTAILTPGETGDLVKGGVAHHPRLACPEGAVTTRHEQDSSRSLTSQPVGKCSSGAAIMHRFMHGGAAVDQSVELINQVGGGKAAGLLYRVTLSMASAEARERLAEG-GAPAIEKTLDPCTVRVKLGGGMSHETSFPFSV-RWSSIEMKYSKHQGYVLFTVPPISAGGAKFPFAWTAY-DIEGVGRRVLPSTPAWSSCPPLASLPRLDFKAEWTNSKVMGGLSFTPAERSSREQTPKSKDRNVNSAFLGLKETILAIASTTCTRHVEERSSLWKHPWVCISENMQDDEPAIWVWVNEILLDSSNEALILDCCVMPVGQMCGAVSTQLGAAVEIDQIRGDGAGRTVFKVMVHPGEMTLWESLLPVAVERARQTYSHTAECAYTTPGDPGWTLCSCGEGKDLPSAFEESMKQVNAFGSLV--HPLFYRAALS 2022
M G + + + HYTSVSF RLLV AGR+LRLS H+ A L A+++NSG+MLA NL QEQ+A+FH L LA +R L PLDTRRVVLLVPKSG+ LLR F+ +YL++ G Q FDNH+ H +V+V RG + G DGWR+L+ HL VRD EDDPEAELM SAL+PT AL++A P++T L+LRPR+S E+ APKDI K+LGG KVFY A ++D ++ A+LTPGE G V + P LACP+ V +Q +S + ++Q V K +S AA +HR +HG +A+DQSVELINQ G G L Y+VTL MA+ AR RLA GAPA+E + DPC++RVKL G+ H PF V + S++++K+SK +GY+ T P + G + PF+ T Y + EG G R +PST W C PL+SLPRLDFKAEW + KVMG S T AE R++ K V+ A LGLKE+ +AIAS CT H +E +W HPWVCIS+N + D+PAIW+WVNEILLDSSNEALILDCCVMPV +M VS QL +E+ DG K +PGE+ LW +LLPVAVERARQTY+HTA+C Y +P D LC CG GKDL S S++ NA G+ V HP YRAA S
Sbjct: 649 MAGPFGMTREMIISMATTANHYTSVSFIRLLVGAGRRLRLSATHYRAVLHALMNNSGMMLASNLSQEQMALFHALDLARMRPCDLGSGPIPLDTRRVVLLVPKSGLSLLRHFQLPGVYLSVTGATTQQPFDNHFTCAHMAYVRVHRGGGLGGEGGGGDGWRSLNKHLSVRDAREDDPEAELMVSALLPTIALVLAVPSVTELQLRPRESIEVINAPKDIKKRLGGDH-KVFYKAGISDADRVAVLTPGEAGKSVMAAESPPP-LACPQIGVACIPDQATS-AYSAQLVRKSTSEAAALHRALHGDSAIDQSVELINQAGRGSDVLLAYKVTLVMANDHARARLAAAEGAPAVELSRDPCSIRVKLEEGLRHTARLPFPVAKRSAMKIKFSKSKGYLCVTAPLLK-GPLQAPFSLTVYSNTEGAGHRAIPSTVFWPPCAPLSSLPRLDFKAEWIHRKVMGEFSLTHAEVLMRDEATTQKKGGVDPALLGLKESFMAIASMACTHHQDELP-VWTHPWVCISDNHRFDQPAIWLWVNEILLDSSNEALILDCCVMPVARMDDPVSAQLRETIELQ----DGPSFVASKA--YPGELALWTALLPVAVERARQTYAHTADCTYASPSDAPLALCDCGRGKDLHSECMHSIELANAMGARVPVHPSVYRAAFS 1306
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI) HSP 1 Score: 551 bits (1419), Expect = 2.780e-177 Identity = 319/662 (48.19%), Postives = 420/662 (63.44%), Query Frame = 1
Query: 70 DECLRSVVMLKHYTSVSFGRLLVLAGRKLRLSEAHFEAALEAIISNSGLMLAPNLQQEQVAMFHTLGLAPVRRALSFPLDPLDTRRVVLLVPKSGILLLRAFRQSELYLALAGKIQSFDNHYVSVHKVFVKVRRGNKH--DQDDGHD-GWRALSSHLMVRDTTEDDPEAELMASALVPTFALMMAPPALTNLELRPRDSAEIFKAPKDIMKKLGGVFTKVFYGADLADVNKTAILTPGETGDLVK--GGVAHHPRLACPEGAVTTRHEQ--DSSRSLTSQPVGKCSSGAAIMHRFMHGGAAVDQSVELINQVGGGKA--AGLLYRVTLSMASAEARERLAEGGAPAIEKTLDPCTVRVKLGGGM-SHETSFPFSVRWSSIEMKYSKHQGYVLFTVPPISAGGAKFPFAWTAYDIEGVGRRVLPSTPAWSSCPPLASLPRLDFKAEWTNSKVMGGLSFTPAERSSREQTPKSKDRNVNSAFLGLKETILAIASTTCTRHVEERSSLWKHPWVCISENMQDDEPAIWVWVNEILLDSSNEALILDCCVMPVGQMCGAVSTQLGAAVEIDQIRGDGAGRTVFKVMVHPGEMTLWESLLPVAVERARQTYSHTAECAYT-TPGDPGWTLCSCGEGKDLPSAFEESMKQVNAFGSLVHPLFYRAALS 2022
+E +R++ HYTS SF RLL LAGR+LRL HFEAAL+A+I SGL++A N+ QEQ+A+FH + L P+R + + P P+DTRRVVLLVP SG++LLRAF E+YL+LAG +FDNH+ S+H FV+VRRG +D G+D GWR+LS HL VRDT DDP AELM SALVP+FA +AP + T + LRPRDS E+ +APKD+M K+GG+ K F+ A+L D ++TAILTPG + GG + LACP+ AVT R ++ S+ S S+P A++HR + G + VD+SVELI GK A +YR+ M + ARE L PA+ ++LDPC VRV LG G+ + PF V ++++MK+S+ QG+VLFTVPP+ G P TA +G G +PS W C PL+SLPRLDF AEW+ KVMGG+SFT E+++R K V++A LGLKE+ LAI ST T H E W W +++ EPAIW+WVN++LLDSSNEAL++DCCV+PV + A+S QL + Q G + GE+ LW SLLPVAVERAR++Y+H +C Y+ T D LC CG GKDLP AF E++K N G FYRAALS
Sbjct: 642 EESIRALTTPMHYTSASFIRLLALAGRQLRLDTRHFEAALKAMIVGSGLIMASNMMQEQMALFHAMDLIPIRPSPNEPGAPVDTRRVVLLVPHSGLMLLRAFSLPEIYLSLAGTRGTFDNHFSSLHMGFVRVRRGRSGGGSRDGGNDNGWRSLSDHLCVRDTQSDDPAAELMISALVPSFAFSLAPLSETEVRLRPRDSVEMMRAPKDVMNKMGGMLWKCFFKANLTDKDRTAILTPGGDDPFGESGGGSSIGVLLACPKTAVTDRLQEAPSSTASTKSEP--------ALLHRIVDGKSTVDRSVELICNGPAGKTGDARFVYRIKFIMITDLAREALTSA-TPAVAESLDPCCVRVTLGKGLLTLVAHLPFPVNRNAVDMKFSRRQGFVLFTVPPLG-GSLHIPSTLTACVADGGG--TVPSNIWWPPCAPLSSLPRLDFNAEWSFDKVMGGMSFTHEEKAARNGVFKLNTTTVDAALLGLKESFLAIISTATTSHTENGRG-WNRSWALVADPDNHSEPAIWIWVNDLLLDSSNEALVIDCCVLPVASVGDAISLQLQRSA---QFGSSAQGGPFLTCKAYAGEIKLWLSLLPVAVERARESYAHAEDCTYSRTSHDSAPVLCKCGMGKDLPPAFVEALKSGNVNGE---KCFYRAALS 1284
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: D8LNQ7_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ7_ECTSI) HSP 1 Score: 161 bits (408), Expect = 3.270e-42 Identity = 89/145 (61.38%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 1597 DEPAIWVWVNEILLDSSNEALILDCCVMPVGQMCGAVSTQLGAAVEIDQIRGDGAGRTVFKVMVHPGEMTLWESLLPVAVERARQTYSHTAECAYTTPGDPGWTLCSCGEGKDLPSAFEESMKQ-VNAFGSLV--HPLFYRAALS 2022
D+ A+WVWVNEILLDSSNEAL+LDCCVM V + GA STQLGAA+E+D+I G GAG +F H GE+ LW +LLPVAVERARQTY+H A+C + +P +LC CG+ KDLP F E MK+ VNA G+ + H LFYRAALS
Sbjct: 2 DQRALWVWVNEILLDSSNEALVLDCCVMLVDRFGGAASTQLGAAIELDEIHG-GAG-VLFAKSYH-GELGLWTTLLPVAVERARQTYAHAADCTHVG-AEPPLSLCGCGKAKDLPLPFVERMKKSVNAVGARLPLHSLFYRAALS 142
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI) HSP 1 Score: 134 bits (336), Expect = 6.190e-29 Identity = 79/164 (48.17%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 919 IMHRFMHGGAAVDQSVELINQVGGGKAAGLLYRVTLSMASAEARERLAEGGAPAIEKTLDPCTVRVKLGGGMSHETSFPFSVRWSSIEMKYSKHQGYVLFTVPPISAGGAKFPFAWTAYDIEGVGRRVLPSTPAWSSCPPLASLPRLDFKAEWTNSKVMGGLSF 1410
++H VD S+ELI V + +GL+Y+VTL MA AR+ LA GGA EK C+V VKLGG H T FPF V+ S+I +K SK QG+ +FTVPP S A+ P A LPS+ WS C PLASLPRLDF+AEWT+ +VMGG+S
Sbjct: 563 VLHHSTRSDFVVDHSIELIRDVWMIEGSGLVYKVTLRMADDGARDVLAAGGAAVDEKAGGLCSVCVKLGGRFGHFTHFPFPVKKSAINLKVSKRQGHAIFTVPP-SGSPAQIPVTALAG---------LPSSLFWSPCVPLASLPRLDFQAEWTHGQVMGGMSI 716 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7073.15878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7073.15878.1 >prot_L-elsbetiae_contig7073.15878.1 ID=prot_L-elsbetiae_contig7073.15878.1|Name=mRNA_L-elsbetiae_contig7073.15878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=674bp MFEHMPKSGMLAAAMQGKLSLPADECLRSVVMLKHYTSVSFGRLLVLAGRback to top mRNA from alignment at L-elsbetiae_contig7073:3..5285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7073.15878.1 ID=mRNA_L-elsbetiae_contig7073.15878.1|Name=mRNA_L-elsbetiae_contig7073.15878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5283bp|location=Sequence derived from alignment at L-elsbetiae_contig7073:3..5285- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7073:3..5285- >mRNA_L-elsbetiae_contig7073.15878.1 ID=mRNA_L-elsbetiae_contig7073.15878.1|Name=mRNA_L-elsbetiae_contig7073.15878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4044bp|location=Sequence derived from alignment at L-elsbetiae_contig7073:3..5285- (Laminarionema elsbetiae ELsaHSoW15)back to top |