mRNA_L-elsbetiae_contig706.15864.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 1.430e-172 Identity = 391/687 (56.91%), Postives = 441/687 (64.19%), Query Frame = 2 Query: 317 EMSPDDVCPSGTDNFDSEGLCQPGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVARNLRSSTISNSAAESEGRLMSLRKRRNRGHISRHDDKQNGLDSSSXXXXXXXXXXXXXXXXXXXXXXXXXDG------------------RYHKKPGMSMMV--------------QQEAPKFTVDGESGSGARG--FIEEE-----------------------TNGSMCAGTGSGWSNRQLVTGSKSDRPSSTKPSKATTAAVGGGAADARALAWEAASVKSHAVGADVTAEEAAXXXXXXXXXXXXXXXXXASGTKRNRSESISSNS---SLGDAIKNLKRTGGS-QGTRISPTSVSDIN-FMSFPVPHTEHSDVAMHHLPQQLAPSWCTKPQDTWMAGAGFDIGA-DSDDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTNASISAGATSSGEGSTIDGDRRTIVPE-VPVDTNKIDMSP----VTDDTYDRPNLDDMASKRRCLEPVAPMPIDPQVYVPVSDASIASEVTRHVEADNAAS--------------------GDSLDITSGLWLDHPQET-----SPLMYGLGLSTPPVAG----------LGGNLSLPSLDEDEVLGFLACAE 2068 ++ DD S +DN D+EG+CQPG ENTGRWTSDEHRLFL+GLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASV+RNLRSST++NS AESEGRLMSLRKRR XXXXXXXXXXXXXXXXXXXXXXXXX R H+ + +EAP FTV G + SGA G F EEE ++ + GT WS R+ KS RPS TK SKA A ARALAWE XXXXXXXXXXXXXXXXX GTKR+RSES+SS+S SLG IK+LKRTGGS Q TRISPTSV+D+N FMSFPVP TE SD+AMHHLPQQLAPSWCTKPQDTWMAGAG D+G ++DDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTT+ S SAG+ RT+VPE +P +TNK+DMSP +D+T+++ ++ +A R +EP+ VP+SDA++ASEV+RHVEAD+A + G SLDITSGLWLDHPQE SPLMYGLGLS P G G LSLPSLDE+EVLGFLACAE Sbjct: 4 QLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSSTMANSPAESEGRLMSLRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHRGVYRETALGATXXXXXXXXXRQAEEAPAFTVGGGN-SGAHGAEFDEEEAEEELDESVDVEGHNSNNKNVGISSSLLHGGTAGTWSKRRPA---KSHRPSPTKASKAAAIAXXXXXXXARALAWE-------------XXXXXXXXXXXXXXXXXXXXXXXXXGTKRHRSESVSSSSNDASLGKTIKSLKRTGGSSQTTRISPTSVADVNSFMSFPVPQTERSDMAMHHLPQQLAPSWCTKPQDTWMAGAGLDMGGLEADDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTDVSTSAGSDHQ--------HHRTVVPEHLPSNTNKVDMSPGGVLTSDNTHNQEDVS-IAKHRGMMEPI----------VPISDAAMASEVSRHVEADSATACAAAXXXXXXXXXXXXXXDGGHSLDITSGLWLDHPQEAHEAVASPLMYGLGLSAPANTGGAXXXXXXXXXXGGLSLPSLDEEEVLGFLACAE 654
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.560e-20 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 386 GQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 G ENTGRWT+DEHRLFL GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G Sbjct: 40 GSENTGRWTADEHRLFLHGLELHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNG 99
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.640e-20 Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 386 GQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 G+ENTGRW+ +EHRLFLKGLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ G Sbjct: 27 GKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGG 86
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A7S2FCS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCS8_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.700e-20 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 338 CPSGTDNFDSEGLCQPGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 C G + P +ENTGRWT +EH +FL GL++HGKGWK IA +I+TRTVVQIRTHAQKYFQKL+KAQ +G Sbjct: 104 CLDGEAQLPEQIRSMPNKENTGRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKLAKAQQNG 179
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC) HSP 1 Score: 105 bits (261), Expect = 1.890e-20 Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 392 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 ENTGRWT++EHRLFL+GLE HGKGWK+IATLI++RTVVQIRTHAQKYFQKL+KA+ SG Sbjct: 308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSG 365
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.430e-20 Identity = 49/61 (80.33%), Postives = 58/61 (95.08%), Query Frame = 2 Query: 383 PGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 P +ENTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G Sbjct: 569 PVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 629
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR) HSP 1 Score: 102 bits (254), Expect = 2.650e-20 Identity = 46/58 (79.31%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 392 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 172
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI) HSP 1 Score: 104 bits (260), Expect = 3.030e-20 Identity = 47/58 (81.03%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 392 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 +NTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 61
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A1E7FR15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR15_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.270e-20 Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 2 Query: 404 RWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 RWTS+EH LFL+GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G Sbjct: 1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.290e-20 Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = 2 Query: 374 LCQPGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 565 L + G+ENTGRWT +EH LFLKGLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ +G Sbjct: 92 LGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig706.15864.1 >prot_L-elsbetiae_contig706.15864.1 ID=prot_L-elsbetiae_contig706.15864.1|Name=mRNA_L-elsbetiae_contig706.15864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=596bp MGEMSPDDVCPSGTDNFDSEGLCQPGQENTGRWTSDEHRLFLKGLELHGKback to top mRNA from alignment at L-elsbetiae_contig706:15302..20892- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig706.15864.1 ID=mRNA_L-elsbetiae_contig706.15864.1|Name=mRNA_L-elsbetiae_contig706.15864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5591bp|location=Sequence derived from alignment at L-elsbetiae_contig706:15302..20892- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig706:15302..20892- >mRNA_L-elsbetiae_contig706.15864.1 ID=mRNA_L-elsbetiae_contig706.15864.1|Name=mRNA_L-elsbetiae_contig706.15864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3576bp|location=Sequence derived from alignment at L-elsbetiae_contig706:15302..20892- (Laminarionema elsbetiae ELsaHSoW15)back to top |