mRNA_L-elsbetiae_contig7031.15834.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI) HSP 1 Score: 630 bits (1626), Expect = 2.470e-202 Identity = 547/932 (58.69%), Postives = 599/932 (64.27%), Query Frame = 1 Query: 1 RSAPDVFKAEPSSKPMSPVKPA--TPARGGGAKAAKSKAKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRFEYEGWPAIGGRELLAAGLFLYVSTPMLKFGRGFEVKMEALEEAISSTEPQESELLSLVHSRLLCTRRELKALKFGEIKYPYSWWTERLQKRLADWYRRRAVLRELTFEAERSDDEGDLLLAGGIEDQRQLQLLLEEQQAMGVEAVGAG---QNGAGVSPSPSSXXXXXXXXXXXXXXXXXXXXXXXTEAPGGLPNGEGAAAVDAMDVEEEAVVTXXXXXXXXXXXXXXAETKPAAVGRNAEAKAGGG----RVREES--------QEWSGGGVEETKGGERPAYQNVATVTAXXXXXXXXXXXXXXXXXXVSAAVAAQGPSGQWYCPDCRAKKRVFGCNGCMQNDKQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKWWYCPDCVRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQKVEFEKKRQQDLARXXXXXXXXXXXXXXXXXXXXXKDDHDLLEYGGRGVAATRRALLKQYEDLEPDSLRLELHRITILLSSIEEAREASDALAXXXXXXXXXXXXP-----------TDVETDAADEAPATAGKAE---------PGSRDGPGAXXXXXXXXXXXXXXXXRTASPKQNLGGGPGPGADTGSVSASGCSSNGGVAGEKAAVESGVCGGEEGSPAGXXXXXXXXISAGEN--RAAGDGYGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKSEDPVAAFWAELAAAAPAESVPTDGSXXXXXXXXXXXXXXXXXXXXELDGPWGGAGDSPLTKEKTYESLSPPLRIAILSALCEELMDDEDFRLRAIDATDPDWLRMTPFGHDSSGRLYYRFIQFRKEMRVYR 2679 R+APDVFKA PS+KPMSP KP TPA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRF+Y+GWPAIGGRELLAAG+FLYVS PM+KFGRGFEVKM+ALEEA+SS +P+E+ELLSLVHSRLLCT RELKALK GE+KYPYSWW ERLQK+L+DWYRRRAVLREL FEAERSD + +G XXXXXXXXXXXXXXXXXXXXXXX GLP G +V AMDVE AAVG AE KA G R ++ Q +GGGVEETKGGE + + V A AA ++ P GQWYCPDCR KKRVFGCNGCMQND+ ++ILQCDGP CGLEYHYGCLDPPL+KVP++KWWYCPDCVRTDN+VGCRVCK DVDYDKLLKCDGPGCELEWH YCL PP+K VPKGDFFCPYCKAKQKVEFEKKRQQD+AR XXXXX DD D YG RGVA R ALL QYEDLEPDSLRLELHRI LL +IEEAREASDAL XXXXXXXXXXXX + V DAA+ PA + + P ++G XXXXXXXXXX T S A G ++ V AA+ + XXXXXXXX + A D G XXXXXXXXXXXXXXXXXXXXXX V + DPVAAFWA LAAAA XXXXXXXXXXXXXXXXXXXXE+DG WGGAGDSPL K+Y SLS PLR ILSALCE+ M+D+ FR+R ID PDWLR TPFGHDS GRLYYRFI FRKEMRVYR Sbjct: 164 RNAPDVFKAGPSTKPMSPSKPTATTPAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDKPEENELLSLVHSRLLCTGRELKALKPGELKYPYSWWAERLQKKLSDWYRRRAVLRELIFEAERSDXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKGLGEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPKGR---SVSAMDVEGAVGAAEDTEAG-------------AAVGSEAEVKANGSGAGMRGNDDDAAGFDGRKQRDAGGGVEETKGGEELSSRAVVATKAAGARGVRGKTSKSKEEP---AAEISKVPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLDKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHTYCLKPPVKTVPKGDFFCPYCKAKQKVEFEKKRQQDIARANEKRXXXXXRKARATAY---SDDDDQPAYGWRGVAGLRGALLAQYEDLEPDSLRLELHRINTLLRNIEEAREASDALXXXXXXXXXXXXXXXXXXXXPSTTGSAVAEDAAEPEPADSPGGDGTKPNAGSPPVEKNGSXXXXXXXXXXXXVVGETAEIRGXXXXXXXXXXXXXKTSSPGAGGPAAENKVDDATAAIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAADSAAGXXXXXXXXXXXXXXXXXXXXXXXDASGGVPEETDPVAAFWAALAAAAXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXEVDGAWGGAGDSPLANGKSYGSLSVPLRAGILSALCEDYMEDDGFRVRIIDEVYPDWLRATPFGHDSCGRLYYRFIHFRKEMRVYR 1072
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A6H5JA25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA25_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 8.800e-134 Identity = 315/517 (60.93%), Postives = 339/517 (65.57%), Query Frame = 1 Query: 1135 PSGQWYCPDCRAKKRVFGCNGCMQNDKQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKWWYCPDCVRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQKVEFEKKRQQDLARXXXXXXXXXXXXXXXXXXXXXKDDHDLLEYGGRGVAATRRALLKQYEDLEPDSLRLELHRITILLSSIEEAREASDALAXXXXXXXXXXXXPTD--VETDAADEAPATAGKAEPGSRDGPGAXXXXXXXXXXXXXXXXRTASPKQNLGGGPGPGADTGSVSASGCSSNGGVAGEKAAVESGVCGGEEGSPAGXXXXXXXXISAGENRAAGDGYGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXVAKSEDPVAAFWAELAAAAPAESVPTDGSXXXXXXXXXXXXXXXXXXXXELDGPWGGAGDSPLTKEKTYESLSPPLRIAILSALCEELMDDEDFRLRAIDATDPDWLRMTPFGHDSSGRLYYRFIQFRKEMRVYR 2679 P GQWYCPDCR KKRVFGCNGCMQND+ ++ILQCDGP CGLEYHYGCLDPPL KVP++KWWYCPDCVRTDN+VGCRVCK DVDYDKLLKCDGPGCELEWH YCL PP+K VPKGDFFCPYCKAKQKVEFEK D+AR DD D YG RGVA R ALL QYEDLEPDSLRLELHRI LL +IEEAREAS XXXXXXXXXXXX T V DAA+ PA D PG + G P G T + + + GGV EK + SP + A XXXXXXXXXXXXXXXXXXXXXXXXX+ + DPVAAFWA LAA APAE XXXXXXXXXXXXXXXXXXXXE+DG WGGAGDSPL K+Y SLS PLR ILSALCE+ M+D+ FR+R ID PDWLR TPFGHDS GRLYYRFI FRKEMRVYR Sbjct: 158 PKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLGKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHTYCLKPPVKTVPKGDFFCPYCKAKQKVEFEK----DIARANEKRRRREARKARATAY---SDDDDQPAYGWRGVAGLRGALLAQYEDLEPDSLRLELHRINTLLRNIEEAREASXXXXXXXXXXXXXXXXSTGFAVAEDAAEPEPA----------DSPGVDGTKPDAGSPPVEEDGNGTDDVGDRAGSPVDGK-TVEMGDAAVAVGGGVHSEKTS-----------SPGAGGPAAEIKVDGAT----------AASXXXXXXXXXXXXXXXXXXXXXXXXXIPEETDPVAAFWAALAAEAPAEPA-XXXXXXXXXXXXXXXXXXXXXXXXEVDGAWGGAGDSPLANGKSYGSLSVPLRAGILSALCEDYMEDDGFRVRIIDEVYPDWLRATPFGHDSCGRLYYRFIHFRKEMRVYR 634
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A6H5JCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 3.540e-57 Identity = 153/198 (77.27%), Postives = 166/198 (83.84%), Query Frame = 1 Query: 1 RSAPDVFKAEPSSKPMSPVKPATPARGGGAKAAKSKAKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--YRFEYEGWPAIGGRELLAAGLFLYVSTPMLKFGRGFEVKMEALEEAISSTEPQESELLSLVHSRLLCTRRELKALKFGEIKYPYSWWTERLQKRLADWYRRRAVLRELTFEAERSDDEGDLLLAG 588 R+APDVFKA PS+KPMSP KP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YRF+Y+GWPAIGGRELLAAG+FLYVS PM+KFGRGFEVKM+ALEEA+SS P+E+ELLSLV SRLLCT RELKALK GE+KYPYSWW ERLQK+LADWYRRRAVLREL FEAERSDDEGD+L AG Sbjct: 163 RNAPDVFKAGPSTKPMSPSKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDRPEENELLSLVLSRLLCTGRELKALKPGELKYPYSWWAERLQKKLADWYRRRAVLRELIFEAERSDDEGDVLSAG 360
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: UPI00053063DA (lysine-specific demethylase 5C-like n=1 Tax=Phaethon lepturus TaxID=97097 RepID=UPI00053063DA) HSP 1 Score: 101 bits (251), Expect = 8.710e-19 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 1189 CNGCMQNDKQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKWWYCPDCVRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYC 1497 C C + D+ K+L CDG C YH CL PPL ++P W CP CV D+ + CR+C + + DKLL CDG C+ +H++CLLPPL +PKG + CP C Sbjct: 6 CRICSRGDEDDKLLLCDG--CDDNYHIFCLLPPLPEIPKGIW-RCPKCVMVDSYI-CRICSRGDEDDKLLLCDG--CDDNYHIFCLLPPLPEIPKGIWRCPKC 102
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A6H5KK34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK34_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 6.280e-14 Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 1213 KQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKW-WYCPDCVRTDNQV----GCRVCKKDVDYDKLLKCDGPGCE-LEWHMYCLLPPLKVVPKGD--FFCPYC 1497 + +++L CDG C + H CLDPPL +VP +W WYC CV N GC C D +K+L CDGPGC +H CL PLK +P G +FCP C Sbjct: 910 RDNQLLLCDGNGCPIATHMKCLDPPLNEVP--RWLWYCNACVLDKNAELSVRGCNACGSTDDDEKILLCDGPGCNSTPYHYDCLPVPLKGLPLGTDPWFCPRC 1010
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A0E0PID7_ORYRU (Uncharacterized protein n=5 Tax=Oryza TaxID=4527 RepID=A0A0E0PID7_ORYRU) HSP 1 Score: 79.7 bits (195), Expect = 1.860e-13 Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 1189 CNGCMQNDKQSK-ILQCDGPKCGLE-YHYGCL---DPPLEKVPTTKWWYCPDCVRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQKVEFEKK 1530 C C + +K +K L C C + YH CL + ++WYCP C+ CRVCK D D ++++ CDG C+ +H+YCL+PPL +VP+G++ C +C +++ E +++ Sbjct: 20 CKVCNEVEKPNKRFLICAHSLCPYKFYHIRCLRYKQIASSEQQGNEYWYCPSCL-------CRVCKVDRDDEQIILCDG--CDEGYHLYCLIPPLTLVPEGEWHCSFCIVQEEKETKRR 129
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A183IXT7_9BILA (Uncharacterized protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IXT7_9BILA) HSP 1 Score: 84.7 bits (208), Expect = 5.200e-13 Identity = 49/120 (40.83%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 1189 CNGCMQNDKQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKWWYCPDC-------------VRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQ 1509 C C Q +I+ CD C YH CLDP LE+ P KW CP C V++ N CR+C D +LL CD C +H YCL+PPLK VP+GD+ CP C KQ Sbjct: 17 CEVCQQG---GEIILCD--TCPRAYHLVCLDPDLEQPPEGKW-SCPRCDEDSKDRNTEQPAVKSGNMEFCRLCH---DGGELLCCDS--CPSSYHTYCLIPPLKDVPEGDWHCPRCSCKQ 125
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: A0A0P0VB64_ORYSJ (Os01g0883400 protein n=5 Tax=Oryza TaxID=4527 RepID=A0A0P0VB64_ORYSJ) HSP 1 Score: 78.6 bits (192), Expect = 1.280e-12 Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 1189 CNGCMQNDKQSK-ILQCDGPKCGLE-YHYGCLDPPLEKVPTTK-----WWYCPDCVRTDNQVGCRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQKVEFEKK 1530 C C + +K +K L C C + YH CL E++ +++ +WYCP C+ CRVCK D D ++++ CDG C+ +H+YCL+PPL +VP+G++ C C +++ E +++ Sbjct: 66 CKVCNEVEKPNKRFLICAHSLCPYKFYHIRCLR--YEQIASSEQQGNEYWYCPSCL-------CRVCKVDRDDEQIILCDG--CDEGYHLYCLIPPLTLVPEGEWHCSSCIVQEEKETKRR 175
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: UPI00071E5D91 (uncharacterized protein LOC106899245 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071E5D91) HSP 1 Score: 83.6 bits (205), Expect = 1.510e-12 Identity = 48/144 (33.33%), Postives = 64/144 (44.44%), Query Frame = 1 Query: 1183 FGCNGCMQNDKQSKILQCDGPKCGLEYHYGCLDPPLEKVPTTKWWYCPDCVRTD-NQVG--------------------------------------CRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYC 1497 + C C + D+ K+L CDG C YH CL PPL ++P W CP CV + VG CR+C + + DKLL CDG C+ +H++CLLPPL +PKG + CP C Sbjct: 1139 YVCRICSRGDEDDKLLLCDG--CDDNYHIFCLLPPLPEIPKGVW-RCPKCVMAKPSSVGLGTLHVTSMEPHSPEPCTKMTMRLRRSHSNSQFVDSYVCRICSRGDEDDKLLLCDG--CDDNYHIFCLLPPLPEIPKGVWRCPKC 1277
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Match: Q5C083_SCHJA (SJCHGC07786 protein (Fragment) n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=Q5C083_SCHJA) HSP 1 Score: 77.0 bits (188), Expect = 5.550e-12 Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 1330 CVRTDNQVG---CRVCKKDVDYDKLLKCDGPGCELEWHMYCLLPPLKVVPKGDFFCPYCKAKQKVEFEKKRQQDLAR 1551 CVR + V CRVC++ D D LL CDG C L +H+YCL PPLK VP GD+FCP C+ ++KR++ LAR Sbjct: 124 CVRWEKSVEDARCRVCRRKTDDDNLLLCDG--CNLAFHLYCLRPPLKRVPTGDWFCPTCRPASHTLEKRKREERLAR 198 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7031.15834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7031.15834.1 >prot_L-elsbetiae_contig7031.15834.1 ID=prot_L-elsbetiae_contig7031.15834.1|Name=mRNA_L-elsbetiae_contig7031.15834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=894bp RSAPDVFKAEPSSKPMSPVKPATPARGGGAKAAKSKAKAPPASKKAVKSPback to top mRNA from alignment at L-elsbetiae_contig7031:544..10305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7031.15834.1 ID=mRNA_L-elsbetiae_contig7031.15834.1|Name=mRNA_L-elsbetiae_contig7031.15834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9762bp|location=Sequence derived from alignment at L-elsbetiae_contig7031:544..10305- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7031:544..10305- >mRNA_L-elsbetiae_contig7031.15834.1 ID=mRNA_L-elsbetiae_contig7031.15834.1|Name=mRNA_L-elsbetiae_contig7031.15834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5364bp|location=Sequence derived from alignment at L-elsbetiae_contig7031:544..10305- (Laminarionema elsbetiae ELsaHSoW15)back to top |