mRNA_L-elsbetiae_contig7015.15815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI) HSP 1 Score: 268 bits (684), Expect = 1.100e-82 Identity = 163/285 (57.19%), Postives = 200/285 (70.18%), Query Frame = 1 Query: 43 MASGLSRTAISRMRVAELKQELANRGLESDGIRPVLQARLGQAAEIERAQSVISRARQRPSSRSETRPAELGSIAGAPPRLARYTNLSKQTGRGAF-----SQGARSMSTSS--PGPPRSSMHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYK------------------VSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETSTASTHPSF 822 M + +SRTAI++MRVAEL++ELA+RGL++ GIRPVLQ RL +A E E AQ+VI R+RQR S + P G+ APP AR + Q R Q R +STSS PG RS+ H++QFDGGSRGNPGPSG GAVLYRLD G R EVWS SVW+G+ RTNNEAEY GLIEGL AA++LG+K+L+VEGDSKLVIQQMLGNYK V+SPKM PLF++A ++K+FD LE+ HI RA N RAD LAN+AMDTETS++ TH S+ Sbjct: 64 MGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNTTEPPRAAGTT--APPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTKPGRQRSTTHLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSSCTHRSY 346
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.910e-34 Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 388 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMD 786 +V+QFDGGSRGNPG +GAG VLY G EVW G ++G+ TNNEAEY+GL+ GL+ A+ +GV + V+GDS+L+++Q+ G YK S K+ P F K L K F+ E++HI R N RAD LAN AMD Sbjct: 11 YVLQFDGGSRGNPGTAGAGMVLYDEVG----HEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMD 139
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.680e-31 Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 388 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETS 798 +VM+FDGGSRGNPG +G G VLY D G +EVW+G ++ + TNNEAEY GL+ GL+ A+ +GV+ + V+GDS+L++ Q+ G YKV S + PLF+ L + F E+ HI R NGRAD LAN AMD +TS Sbjct: 78 YVMRFDGGSRGNPGIAGCGMVLYDADTG---MEVWTGRQYL-ETATNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQFSFFEIGHIYRDKNGRADELANEAMDHKTS 210
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.780e-31 Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 394 MQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETST 801 +QFDGGSRGNPG SGAG V+Y EVW+GS + + TNNEAEY+ L++GL+ A+ LG++ LAV+GDS L++ Q+ G YKV S + P + A L +F E+ HI R NGRAD LAN+AMD+ + T Sbjct: 39 LQFDGGSRGNPGLSGAGMVIYNDK----SQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAFSTFEISHIPREENGRADELANIAMDSASCT 170
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ) HSP 1 Score: 127 bits (318), Expect = 3.430e-31 Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 388 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 783 + ++FDG S+GNPGP+GAGAV+Y+ D E+W+ S +VG TNN AEY GLI GL A ELG+K+L V GDS+L+I+QM G YKV S + + KAK L++ FD ++ +HI R N RAD LAN+ + Sbjct: 28 YCLKFDGCSKGNPGPAGAGAVIYKND-----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDNIKYEHIYRKDNTRADELANLGL 154
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ) HSP 1 Score: 126 bits (316), Expect = 6.840e-31 Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 388 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETSTA 804 + ++FDG S+GNPGP+GAGAV+Y+ D E+W+ SV+VG TNN AEY+GLI GL A ELG+K+L V GDS+L+I+QM G YKV S + + KAK L++ ++ +HI R N RAD LAN + ++ S++ Sbjct: 27 YCLKFDGCSKGNPGPAGAGAVIYKND-----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTLSRFLSEVHYEHIYRKDNTRADELANFGLQSKLSSS 160
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0ESY5_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESY5_9ZZZZ) HSP 1 Score: 125 bits (314), Expect = 1.320e-30 Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 370 PPRSSMHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 783 P SS +QFDG S+GNPG SGAGAV+Y D E+W S++VG+ TNN AEYSGLI GL+ A EL +K++ VEGDS LVI+QM G+YKV S + L ++A L ++FD ++ HI R N RAD L+N+A+ Sbjct: 23 PEISSGFRLQFDGCSKGNPGISGAGAVIYNFD-----EEIWWDSLFVGENTTNNYAEYSGLILGLKKAIELDIKEIIVEGDSTLVIKQMKGDYKVYSENLQDLHREALKLCENFDSIQFTHIYRINNKRADYLSNLAI 155
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0ETC3_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ETC3_9ZZZZ) HSP 1 Score: 125 bits (315), Expect = 1.460e-30 Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 385 MHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 783 H + FDG S+GNPGP+GAGAV+Y+ E+WS S++VG TNN AEY+GLI GL A +K+L V+GDS LVI+QM G YKV+S M L++ AKG K FDK+ +H+ R N RAD L+N + Sbjct: 41 QHTLFFDGCSKGNPGPAGAGAVIYQ-----GNTEIWSKSLFVGNNSTNNVAEYTGLIIGLHEAVNKKIKELIVKGDSMLVIKQMKGEYKVNSKDMLRLYENAKGFEKYFDKIVYEHVYRDHNKRADQLSNEGL 168
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0F3V1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F3V1_9ZZZZ) HSP 1 Score: 125 bits (313), Expect = 1.790e-30 Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 385 MHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTE 792 ++ + FDG S+GNPG GAGAV+Y+ + E+W+G+ +VG TNN AEYSGLI GL+ A +L +K L V GDS LVI+QM YKV SP + PL+ +A AK+FDK+E H+ R N RAD L+N +D E Sbjct: 25 IYTLNFDGCSKGNPGRGGAGAVIYK-----DQEEIWAGATFVGANVTNNYAEYSGLILGLKTAIKLKIKNLDVLGDSDLVIKQMKKIYKVKSPNIYPLYLEANDTAKAFDKIEFTHVYRENNKRADELSNDGLDLE 155
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0HEB0_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HEB0_9ZZZZ) HSP 1 Score: 124 bits (311), Expect = 4.880e-30 Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 388 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTE 792 +V++FDG S+GNPGP+GAGAVLY D E+W +VG+ TNN AEY GL+ GL A +++L V GDS+LVI+QM G YK+ S + PL+ +AK + K FDK+ +HI R N RAD LAN A++ + Sbjct: 30 YVLKFDGCSKGNPGPAGAGAVLYYND-----REIWYNRKFVGRKETNNYAEYCGLLLGLNEALRENIRELKVCGDSQLVIKQMKGEYKLKSENLYPLYTEAKSMEKQFDKIVYEHIYRQYNSRADELANAALEDQ 159 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7015.15815.1 >prot_L-elsbetiae_contig7015.15815.1 ID=prot_L-elsbetiae_contig7015.15815.1|Name=mRNA_L-elsbetiae_contig7015.15815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp MASMASGLSRTAISRMRVAELKQELANRGLESDGIRPVLQARLGQAAEIEback to top mRNA from alignment at L-elsbetiae_contig7015:4403..9169- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7015.15815.1 ID=mRNA_L-elsbetiae_contig7015.15815.1|Name=mRNA_L-elsbetiae_contig7015.15815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4767bp|location=Sequence derived from alignment at L-elsbetiae_contig7015:4403..9169- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7015:4403..9169- >mRNA_L-elsbetiae_contig7015.15815.1 ID=mRNA_L-elsbetiae_contig7015.15815.1|Name=mRNA_L-elsbetiae_contig7015.15815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1620bp|location=Sequence derived from alignment at L-elsbetiae_contig7015:4403..9169- (Laminarionema elsbetiae ELsaHSoW15)back to top |