mRNA_L-elsbetiae_contig7015.15814.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7015.15814.1
Unique NamemRNA_L-elsbetiae_contig7015.15814.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: D7FN02_ECTSI (5\'-AMP-activated protein kinase subunit gamma-1 (AMPK gamma-1 chain) (AMPKg) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN02_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.310e-86
Identity = 142/154 (92.21%), Postives = 148/154 (96.10%), Query Frame = 1 
Query:    1 FLVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            FLVT FREQ+R FDDPI+ELRIGIFSDSVVTV EHACLSEVLDLLELHRIGAVPIVDA+GRVVGIYSRSDITFLATAADPG VL+NL+ KLSDILGQPGNEGLRDRLITCSP DTLQTVFEKFADFRFKRIVVVDEEARCKGII+VSDLLAYFL
Sbjct:  192 FLVTMFREQQRLFDDPIAELRIGIFSDSVVTVQEHACLSEVLDLLELHRIGAVPIVDADGRVVGIYSRSDITFLATAADPGGVLENLDRKLSDILGQPGNEGLRDRLITCSPQDTLQTVFEKFADFRFKRIVVVDEEARCKGIISVSDLLAYFL 345
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A836CIU9_9STRA (5'-AMP-activated protein kinase subunit gamma-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU9_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.130e-69
Identity = 120/154 (77.92%), Postives = 135/154 (87.66%), Query Frame = 1 
Query:    1 FLVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            FLV TFREQRR FDDPI EL IG+F D+VVTV +HA LSEVLDLLELHRIGAVPIVDA GRVV IYSRSDITFLATAADP +VL+NL+ KL DIL QPGNE LRD L+TC+PSDTLQ++FEKFA+ +FKRIV VD + RCKG+I+VSDLLAYFL
Sbjct:  154 FLVNTFREQRRLFDDPIGELPIGVF-DNVVTVQQHARLSEVLDLLELHRIGAVPIVDAAGRVVNIYSRSDITFLATAADPDSVLRNLDAKLCDILAQPGNEVLRDSLVTCAPSDTLQSIFEKFAEVKFKRIVCVDADHRCKGLISVSDLLAYFL 306
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S2SVN1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVN1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.020e-40
Identity = 83/154 (53.90%), Postives = 107/154 (69.48%), Query Frame = 1 
Query:    1 FLVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGL-RDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYF 459
            +LV  FREQRR F+D I++L IG F + V+TV + A LS+VLD +E   + AVP+VD   RVVG+YSRSDITFLATA D  +VL NL   L  IL Q   E + RDRL TCS   +LQ++FE+FA+  F R+V VD+E RC GI++  DL+ YF
Sbjct:  178 YLVDNFREQRRLFEDSIADLGIGTFGEEVLTVRKTAVLSDVLDAMEARDVSAVPVVDESDRVVGLYSRSDITFLATATDADSVLSNLRVTLQQILEQKPTEDVPRDRLETCSVHASLQSIFERFAEVGFHRLVCVDDERRCLGIVSARDLILYF 331
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S1BKI0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKI0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.830e-39
Identity = 80/161 (49.69%), Postives = 110/161 (68.32%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQP--------GNEGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L IG +++ V+TV  +  LSE L LL+ H + +VP+VD EGRV+ +YSRSDITFLATA+D    ++NLN  L +IL Q          +    DRL TC+PS TLQ++FE FA  +F R++V D++ RC G+++  DL+AYF+
Sbjct:  180 LVTHFREQRRLFDDTIYDLGIGTYNN-VITVCTNQSLSECLHLLQTHELSSVPVVDQEGRVINVYSRSDITFLATASDADDAIRNLNLTLGEILDQQREILTTQRADVSTPDRLHTCTPSHTLQSIFEYFAQLKFNRLIVTDDDHRCVGVVSARDLVAYFV 339
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S0GL11_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GL11_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.340e-38
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDA-EGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L IG +   VVT+  +  L+E L L  +H + A+PIVD   G V+ +YSRSDITFLATA D    +QNLN  LS+IL +   +    DRL TCSPS TLQ++FE FA  RF R++V DE  RC G+I+  DL+AYF+
Sbjct:  213 LVTHFREQRRLFDDTIYDLGIGTYGADVVTIDVNQTLAECLHLCHVHDLSAIPIVDVPNGSVINVYSRSDITFLATATDADDAIQNLNLTLSEILAEQRTDVTTPDRLHTCSPSHTLQSIFEYFAHHRFNRLIVTDERQRCMGVISARDLVAYFI 367
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S2PRW3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRW3_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.940e-38
Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILG-QPGNEGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L IG +   VVTV  H  L E L + +   + AVP+VDA+GRV+ +YSRSDI+FL  A D    +++L+  + +ILG Q  +    DRL TCSP+ TLQ++FE FA  +F R++VVDEE RC G+++  DL+AYF+
Sbjct:   74 LVTHFREQRRLFDDSIYDLNIGTYGADVVTVQPHHTLQECLAVCQSRHLSAVPVVDAQGRVLNVYSRSDISFLHHATDADDAVRSLDKTVGEILGMQRTDVSTPDRLHTCSPTHTLQSIFEYFAQLKFNRLIVVDEEHRCVGVVSARDLVAYFV 227
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: B7FUD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUD1_PHATC)

HSP 1 Score: 150 bits (379), Expect = 5.390e-37
Identity = 80/155 (51.61%), Postives = 106/155 (68.39%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDA-EGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L+IG + DS+V+V  +  LS+ L L++ H++ A+P+VDA   ++VG+YSRSDITFL  A D    ++NL+  L+DIL Q   +    D L TCSPS TLQ +FE FA  RF R+ VVD E R  GI++  DL+AYFL
Sbjct:  180 LVTHFREQRRLFDDSIVDLKIGTYGDSLVSVTPNQTLSDALGLMKKHKLSALPVVDAGTHKIVGVYSRSDITFLTKAIDAEDAVRNLDMPLADILSQTRQDVTTPDALRTCSPSHTLQAIFESFAQLRFHRLYVVDTEERLVGIVSARDLVAYFL 334
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S2LPY4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPY4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.020e-36
Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILG-QPGNEGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L IG +   VVTV  H  L E L + +   + AVP+VDA+GRV+ +YSRSDI+FL  A D    +++L+  + +ILG Q  +    DRL TCSP+ TLQ++FE FA  +F R++VVDEE RC G+++  DL+AYF+
Sbjct:  209 LVTHFREQRRLFDDSIYDLNIGTYGADVVTVQPHHTLQECLAVCQSRHLSAVPVVDAQGRVLNVYSRSDISFLHHATDADDAVRSLDKTVGEILGMQRTDVSTPDRLHTCSPTHTLQSIFEYFAQLKFNRLIVVDEEHRCVGVVSARDLVAYFV 362
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7S2UP91_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP91_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.720e-35
Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEGR-VVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FREQRR FDD I +L IG +++ VVTV  +  L+E L LL +H +GAVP+VD E R VVG+YSRSDITFL +A D    ++NL+  L  ++ +   +    D L TC+   TLQ++FE FA  RF R++VVDEE R  G+++  DL+AYFL
Sbjct:  224 LVTHFREQRRLFDDTIYDLGIGTYNEEVVTVTPNQTLAEALHLLHMHSLGAVPVVDQETRKVVGVYSRSDITFLHSATDVEDAIRNLDLTLESVMAERRTDVTTPDSLHTCTMGHTLQSIFEYFAQLRFNRLIVVDEEERVVGVVSARDLVAYFL 378
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BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Match: A0A7R9WWZ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWZ1_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.420e-35
Identity = 76/155 (49.03%), Postives = 105/155 (67.74%), Query Frame = 1 
Query:    4 LVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRIGAVPIVDAEG-RVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGNEGLR-DRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLLAYFL 462
            LVT FRE RR FDD I +LRIG + D++VTV     L++ L+L+ LH +GA+P+VDAE  +++G+YSRSDITFL  A D    + NL+ +L DIL Q   +    D L TCS + TLQ +FE FA  RF R+ +V+E+ R  G+++  DL+AYFL
Sbjct:  214 LVTHFRENRRLFDDSIYDLRIGTYHDNLVTVGPTQTLAQALELMRLHNLGALPVVDAETQKIIGVYSRSDITFLTRATDAEDAVANLDLQLQDILQQQRTDVTTPDALHTCSTTHTLQAIFEYFAQLRFNRLYIVNEQDRLVGVVSAHDLVAYFL 368
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7015.15814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN02_ECTSI2.310e-8692.215\'-AMP-activated protein kinase subunit gamma-1 (... [more]
A0A836CIU9_9STRA2.130e-6977.925'-AMP-activated protein kinase subunit gamma-1 n=... [more]
A0A7S2SVN1_9STRA2.020e-4053.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BKI0_9STRA6.830e-3949.69Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0GL11_9STRA1.340e-3852.90Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2PRW3_9STRA3.940e-3850.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FUD1_PHATC5.390e-3751.61Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2LPY4_9STRA1.020e-3650.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2UP91_9STRA1.720e-3550.32Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7R9WWZ1_9STRA3.420e-3549.03Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7015contigL-elsbetiae_contig7015:874..4217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.0
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D7FN02
Preferred nameSNF4
KEGG koko:K07200
KEGG Pathwayko04068,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,map04068,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001302,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005737,GO:0005829,GO:0005886,GO:0006109,GO:0006111,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007031,GO:0007154,GO:0007165,GO:0007568,GO:0007569,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010675,GO:0010676,GO:0010906,GO:0010907,GO:0012505,GO:0016020,GO:0016043,GO:0016208,GO:0016310,GO:0017076,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0023052,GO:0030234,GO:0030295,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031588,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032147,GO:0032268,GO:0032270,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033674,GO:0035639,GO:0036094,GO:0036211,GO:0042325,GO:0042327,GO:0043085,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043539,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045722,GO:0045859,GO:0045860,GO:0045913,GO:0045937,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061695,GO:0062012,GO:0062013,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1902911,GO:1903506,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.cellular response to glucose starvation
EggNOG OGsCOG0517@1,KOG1764@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionCBS domain
Ec32 orthologEc-25_002950.1
Exons5
Model size1775
Cds size465
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7015.15814.1prot_L-elsbetiae_contig7015.15814.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7015 874..2897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.0025148-CDS-L-elsbetiae_contig7015:873..10181622816779.0025148-CDS-L-elsbetiae_contig7015:873..1018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 874..1018 +
1691683806.5681381-CDS-L-elsbetiae_contig7015:873..10181691683806.5681381-CDS-L-elsbetiae_contig7015:873..1018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 874..1018 +
1622816779.0131075-CDS-L-elsbetiae_contig7015:1846..19561622816779.0131075-CDS-L-elsbetiae_contig7015:1846..1956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 1847..1956 +
1691683806.5798056-CDS-L-elsbetiae_contig7015:1846..19561691683806.5798056-CDS-L-elsbetiae_contig7015:1846..1956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 1847..1956 +
1622816779.02627-CDS-L-elsbetiae_contig7015:2427..25231622816779.02627-CDS-L-elsbetiae_contig7015:2427..2523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 2428..2523 +
1691683806.5887582-CDS-L-elsbetiae_contig7015:2427..25231691683806.5887582-CDS-L-elsbetiae_contig7015:2427..2523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 2428..2523 +
1622816779.037156-CDS-L-elsbetiae_contig7015:2783..28971622816779.037156-CDS-L-elsbetiae_contig7015:2783..2897Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 2784..2897 +
1691683806.5992494-CDS-L-elsbetiae_contig7015:2783..28971691683806.5992494-CDS-L-elsbetiae_contig7015:2783..2897Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7015 2784..2897 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.0480018-UTR-L-elsbetiae_contig7015:2897..41661622816779.0480018-UTR-L-elsbetiae_contig7015:2897..4166Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7015 2898..4166 +
1691683806.608096-UTR-L-elsbetiae_contig7015:2897..41661691683806.608096-UTR-L-elsbetiae_contig7015:2897..4166Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7015 2898..4166 +
1622816779.058298-UTR-L-elsbetiae_contig7015:4178..42171622816779.058298-UTR-L-elsbetiae_contig7015:4178..4217Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7015 4179..4217 +
1691683806.617061-UTR-L-elsbetiae_contig7015:4178..42171691683806.617061-UTR-L-elsbetiae_contig7015:4178..4217Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7015 4179..4217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7015.15814.1

>prot_L-elsbetiae_contig7015.15814.1 ID=prot_L-elsbetiae_contig7015.15814.1|Name=mRNA_L-elsbetiae_contig7015.15814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
FLVTTFREQRRPFDDPISELRIGIFSDSVVTVPEHACLSEVLDLLELHRI
GAVPIVDAEGRVVGIYSRSDITFLATAADPGAVLQNLNCKLSDILGQPGN
EGLRDRLITCSPSDTLQTVFEKFADFRFKRIVVVDEEARCKGIITVSDLL
AYFL*
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mRNA from alignment at L-elsbetiae_contig7015:874..4217+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7015.15814.1 ID=mRNA_L-elsbetiae_contig7015.15814.1|Name=mRNA_L-elsbetiae_contig7015.15814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3344bp|location=Sequence derived from alignment at L-elsbetiae_contig7015:874..4217+ (Laminarionema elsbetiae ELsaHSoW15)
TTTCTCGTTACGACGTTTCGGGAGCAGCGACGTCCTTTCGATGATCCCAT
TTCGGAGCTCCGGATAGGGATTTTTTCTGACAGCGTGGTGACGGTGCCCG
AGCACGCCTGCCTGTCTGAGGTCCTCGATCTCCTCGAGCTGCACCGTGAG
TTGGTTGCACTCCACACTTCTTTGCGCGTAAAGCAGCACGCCGTTTTGGC
GTTTTGTGTCGTGTCCGTCTGGTGTTTATTTTTTATTTTTTTATTTTTCG
CATTTATTTCCAGTGCTCGATAGGCTCTTCGTCACGAGGACAAATTGCCA
TAGCACGGAACCGTGGTCACACAGAAGGGTTCCTTTCCCCCAAGGCCCCC
ACTCCCCCCGTCTGCGGTACTTGCCTGAGATTTTTGTCGCGAGAAGGGTT
CAGCCGTCCCTTTCCCCCCTGATGGTGTGTGTGGGCCAAAATAACTGGTT
GGATGCGTGGTGGCCTTGCCAAGTGGACGGATTGCTGTTGCGTGCGGGAA
CAGACATCCCAAAGCCCTTGATTTAACCCCACTCTTTCGGCTCTTGCTTT
TGATCCCCTTGTTTTTCCTGTGTACTGCGACGGCACGCTCCAGTTGCTTT
TCAGCGCTGGCTGCTCATGATGTGGGCCCATCGTTGTATTTATGACTTGA
TGCCTCCCTGTCTTCGTCGATTGGAACCTCAAGTACTGTAGCACCTGAAT
TGTGTGGTCTGCTTTTCGTGGGTGTTGAGCCCGCTCTCGTCACTGACCCA
CCCCAGGTGATCCTCCGAGATAAACGTCGTATTGATGCGGTTTGAAGTCG
TGCAACACCAGTGTTCCTTCAGCGCTCTTCGCTGCATTATCGGTTTATTT
GGGTTGAGCTCGAAGTTGGCTGCAACCTCTGTTGTAAATATTTTATCAGT
TTCCCCAGCTACGTATGCAAGACATCTCTCACTCCGGTGGACTCTGCATA
TTTTCAAATGTTCCCTCGTGCAGGGATCGGAGCGGTTCCTATCGTAGACG
CAGAAGGGCGAGTAGTGGGGATTTACAGCCGATCAGATATCACCTTTTTG
GCAACAGCGGCCGACCCTGGAGCTGTTCTTCAGGTGAGTTACCGCAACCT
TTTTCTCAGTATTGCGTTGCCCTTAGTCCCCCCCCCCCCCTATTGATCGA
TTTGGCTTTGGCGTGTGTGCCAAGCTGTTTCCCAAAACCGGCTGCTTGTG
TGAAAGTGCCACCCTTTGTGCATGAAAACACCGACACATTCGACGCAAAG
CGAATGAACGAATAGCGCTTCTCGCCTCCGGGCCGGCCATGTTCGGACCG
CAACATGATTGCTTTGCTCTCTGGCCATCCGTTTTTTAGGGGTACGGACA
AACTTGTGTGGGTCAGCATTATTTGCTGCCTGCTGCCCCGGTTGCGTATC
ATGCCCATGTTGTTTACGCAACGCTCTAGCTAACGTTCAGTGGAGTTCGC
GCTTGTTTGGTGGGCGCTACTGGGTGCTGTATAGCTTCTCTAACCAGTGC
GTGCGTGTGCTTGTGCCGCATCGCTGTGGCTTTTTATCCGTATTAATCTT
CCAGAACCTGAACTGCAAGCTGAGCGACATCTTGGGGCAGCCGGGAAACG
AGGGGCTGAGGGATCGCCTCATAACGTGCTCCCCGAGTGATACGTTGCAG
GTACACACCCTTTGGCACTCCGTTGCTTGCACGTTATTACATCATGATGG
CGCGCTGCAGTAACTGCTTGGAGCTCAAACGTGCTCGTTATCTCGTGGCC
CATCGCACCTCCAACATGCATACCGGCTTGAACACTCTGTCGTCGATATT
TTTTATGGATCCATTTTATTACACAACGCTGACACCTGTGCGTTGCGAAC
TGCCGCTCGTTGTGTGTCCCCACGCTTCCACGTCTGGCTCTGGTCCTGCC
ACGGTCTCAGACTGTATTCGAGAAGTTCGCGGACTTTCGGTTCAAGCGAA
TCGTCGTAGTAGACGAGGAGGCTAGGTGCAAGGGTATAATCACCGTCAGC
GATCTGCTCGCCTACTTCCTGTAACCAGTGCTCTGAGCTCGCTAGGTGCT
GCGTGCAGTGTCTGGATACCGTATGGGGTAGGAAGGGAAGAGAGAGGAGT
GGTGGGTGGTACATTTGTTTGTGTGATGATTATGCAGCGACACGCCGCCG
TACATACCGCATTTCGATGCTGAATGTCGGGAGTGAGCGGCCGCGGTCGG
CCGCGGTTCAGAGGCACTGTTTGCTCGGAAAAGAGAGAGAGCGTCCTTGT
GTCTGTCCGTTGGTCTTTTTCATCATTTCCTTGATTTTTTATTTTTATCT
AGTTAGAAAGACTCGGCGACAGGAGATACGAAGTATTGCGTGTTTTTTTG
TGTGGTGCGGTTGTGTGTTATGCTCGGCATCCACCCGGATTGGTTGGGGC
ACTAAGTGATTAATTGTGTTTTCAACTCCTCTTTACTGTGTCGAAGCAAA
CAGAGGCTGCATGGTGTGCTTTTTCGTGCGGGTTAGATGGCTACATAGTG
TGCTCGAAAAGGGGCTCCGTGCACGACACGGGGGGTTGTCATCCGTGCGT
GACAGTGTGGGAGTAGTTACGAAGAGTCGACGTGTACCGAACTTGGCCAT
ACCGAACTTGGCCAGTAAAGGCAGACGGAGTCGACACGCGGCGTTGCACT
AGCGGCACATAATTGTACCGAATAGGAAACACTATGAATACCTGGCTGGC
AATTGTTCAGTTTTCCGACTAGTCGACACGTACGTCCTGTATTGAGCGTT
TTGGTCAGCCAGAAGTCGAGCTGCTTCAGTTTTTAGCCTGAAGCAACGCT
TGGAATGTAGAATATAGAGCGATTGGCAATATAGTTGTTTTTCTTGCGTT
CATTCTGATTGTGGTCCGACTCTCTGCGGATGTAAAGGCGCAATAAGGGG
CTCGATAAATGCAGTAAACCTGGCTACAGAGCAACAGCCGCAGACGAACC
CTCCTCATGCATCCATCAGCTGCTTGTCCGAATAAACTTGGGTGGATGTG
TGCCTGCAAACGATTCGATTGCTGCTTCGCACTCCCAAGAGGTATCGATC
TACGGTTCACGAATACCCACCACTGGTAGCAGCTTCGTCTTGGTCGCGGC
AATCTGTTCGCGGTCTACTCTCCAACTCTGTAAGCCTCCGTCGACAACGA
GGATATTTATGGCTGTGTTTATAGGAAAAAAATCTTGAAAATAAAAACCT
TGGTGTATTTTGACCTTTGTGGCCACGTTTCTTCGCCACGAGCTCGGAAT
CAGATTTTCGCTTCTCAGGGACTTTCAAAGCTCTCCTTCAGAGGTTTACG
GATAGGTTTACGGATCAGCTGTCCAATCTGGCACACTCCGGGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7015:874..4217+

>mRNA_L-elsbetiae_contig7015.15814.1 ID=mRNA_L-elsbetiae_contig7015.15814.1|Name=mRNA_L-elsbetiae_contig7015.15814.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig7015:874..4217+ (Laminarionema elsbetiae ELsaHSoW15)
TTTCTCGTTACGACGTTTCGGGAGCAGCGACGTCCTTTCGATGATCCCAT
TTCGGAGCTCCGGATAGGGATTTTTTCTGACAGCGTGGTGACGGTGCCCG
AGCACGCCTGCCTGTCTGAGGTCCTCGATCTCCTCGAGCTGCACCTTTCT
CGTTACGACGTTTCGGGAGCAGCGACGTCCTTTCGATGATCCCATTTCGG
AGCTCCGGATAGGGATTTTTTCTGACAGCGTGGTGACGGTGCCCGAGCAC
GCCTGCCTGTCTGAGGTCCTCGATCTCCTCGAGCTGCACCGGATCGGAGC
GGTTCCTATCGTAGACGCAGAAGGGCGAGTAGTGGGGATTTACAGCCGAT
CAGATATCACCTTTTTGGCAACAGCGGCCGACCCTGGAGCTGTTCTTCAG
GGATCGGAGCGGTTCCTATCGTAGACGCAGAAGGGCGAGTAGTGGGGATT
TACAGCCGATCAGATATCACCTTTTTGGCAACAGCGGCCGACCCTGGAGC
TGTTCTTCAGAACCTGAACTGCAAGCTGAGCGACATCTTGGGGCAGCCGG
GAAACGAGGGGCTGAGGGATCGCCTCATAACGTGCTCCCCGAGTGATACG
TTGCAGAACCTGAACTGCAAGCTGAGCGACATCTTGGGGCAGCCGGGAAA
CGAGGGGCTGAGGGATCGCCTCATAACGTGCTCCCCGAGTGATACGTTGC
AGACTGTATTCGAGAAGTTCGCGGACTTTCGGTTCAAGCGAATCGTCGTA
GTAGACGAGGAGGCTAGGTGCAAGGGTATAATCACCGTCAGCGATCTGCT
CGCCTACTTCCTGTAAACTGTATTCGAGAAGTTCGCGGACTTTCGGTTCA
AGCGAATCGTCGTAGTAGACGAGGAGGCTAGGTGCAAGGGTATAATCACC
GTCAGCGATCTGCTCGCCTACTTCCTGTAA
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