mRNA_L-elsbetiae_contig6984.15765.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6984.15765.1
Unique NamemRNA_L-elsbetiae_contig6984.15765.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6984.15765.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE)

HSP 1 Score: 479 bits (1232), Expect = 3.320e-153
Identity = 283/447 (63.31%), Postives = 315/447 (70.47%), Query Frame = 2 
Query:    5 VYADSLKPAKETAQSRPLGHRGGVRGRSAGIATAAAFGTVKLLKERSEEARNTAVVLMLVLEQIDRVGLPEQLEANIVADALPLALKYINQYALAAEVGSHHLRVPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGAIGGGAQPAAVAASKPWGCTALEGLFMDGQGVVQDYWAMMAGASERQ-RLLGLGGLPALLAGMCEGTSRSPLGGLDSGGLAAFLHASEQYQLALPLVGLSAEWQWRMKIEPETAVLTAIARGFLYSAEAAARSEGGGGLSAGSLLDQATKWYIKASQALRASLFRPGAGGAGGGAEIVVAHFEDALEEVERVRGRVKRGGSGGVGAVRGGGAGEDEDEGWG---------EDFGGRGAVNALELARAALAAER*QQXXXXXXXXXXXXXQRQARLCQVVFKHASEALSFAEAFGAVCENPVDQQR 1315
             +A+SLKPAKE  +SRPLGH GGV G S+GIATAAAFGTVKL+KERS EARNTAVVLMLVLEQ+DR+GL +QLEANIVA ALPLALK +NQ+AL+AEVGSHHLRV GG                               G    GG AQPA+VAASKPWGCTALEGLF+D  GVVQDYWAM   AS R  R LGLGG+P+LLAGMCEGT RS L  LDSGGL +FLHA++QYQLALPLVGL+ EWQWRMK+EP  AVLT+IARGFLYSAEAAARSEGGG  S+GSLLD+ATKWY+K+SQALRA L R   GG    AE+VV HFEDAL EVERVR  +KR                                EDFGGRG VNALELARAAL  ER +              QR+ARLCQ+VFKHASEAL F EAF AVC+NP+DQQR
Sbjct:  439 TWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPLALKCMNQHALSAEVGSHHLRVRGGTHPVASRRG----------------------GRSGWGGDAQPASVAASKPWGCTALEGLFLDSWGVVQDYWAMSTEASARGGRQLGLGGVPSLLAGMCEGTLRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMKVEPHAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSSGGGGDNQAELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETER-ELRGSAGGQQPHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQR 862
[Close]
BLAST of mRNA_L-elsbetiae_contig6984.15765.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 6.740e-152
Identity = 294/457 (64.33%), Postives = 324/457 (70.90%), Query Frame = 2 
Query:    5 VYADSLKPAKETAQSRPLGHRGGVRGRSAGIATAAAFGTVKLLKERSEEARNTAVVLMLVLEQIDRVGLPEQLEANIVADALPLALKYINQYALAAEVGSHHLRVPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGAIGGGAQPAAVAASKPWGCTALEGLFMDGQGVVQDYWAMMAGASERQRLLGLGGLPALLAGMCEGTSRSPLGGLDSGGLAAFLHASEQYQLALPLVGLSAEWQWRMKI-----------EPETAVLTAIARGFLYSAEAAARSEGGGGLSAGSLLDQATKWYIKASQALRASLFRPGAGGAGGGAEIVVAHFEDALEEVERVRGRVKRGGSGGVGAVRGGGAGEDEDEGWG---------EDFGGRGAVNALELARAALAAER*QQXXXXXXXXXXXXXQRQARLCQVVFKHASEALSFAEAFGAVCENPVDQQR 1315
             +A+SLKPAKE  +SRPLGH GGV G S+GIATAAAFGTVKL+KERS EARNTAVVLMLVLEQ+DR+GL +QLEANIVA ALP+ALK +NQYAL+AEVGSHHLRV GG                               G G IG  AQPA+VAASKPWGCTALEGLF+D +GVVQDYWAM   AS R R LGLGG+P+LLAGMCEGT RS L GLDSGGL +FLHASEQYQLALPLVGL+ EWQWRMK+           EP TAVLT+IARGFLYSAEAAARSEGGG  S+G LLD+ATKWY+K+SQALRA L RPG GG    AE VV HFE AL EVERVR  ++R                                EDFGGRG VNALELARAAL  ER +        XXXXXXQRQARLCQ+VFKHASEAL F EAF AVC+NP+DQQR
Sbjct:  843 TWAESLKPAKEPPRSRPLGHGGGVCGCSSGIATAAAFGTVKLMKERSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPVALKCMNQYALSAEVGSHHLRVRGGTHPVASWRGGRSGWG----------------GGGGIGD-AQPASVAASKPWGCTALEGLFLDSRGVVQDYWAMSTEASTRGRQLGLGGVPSLLAGMCEGTLRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMKVGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGGGGHNQAESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETER-ELRGSAGDQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQR 1281
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6984.15765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLL3_9PHAE3.320e-15363.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXJ0_ECTSI6.740e-15264.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6984contigL-elsbetiae_contig6984:98..9744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size1320
Cds size1317
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816774.188366-CDS-L-elsbetiae_contig6984:97..2381622816774.188366-CDS-L-elsbetiae_contig6984:97..238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 98..238 +
1691683802.9476068-CDS-L-elsbetiae_contig6984:97..2381691683802.9476068-CDS-L-elsbetiae_contig6984:97..238Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 98..238 +
1622816774.1990356-CDS-L-elsbetiae_contig6984:1066..11271622816774.1990356-CDS-L-elsbetiae_contig6984:1066..1127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 1067..1127 +
1691683802.959539-CDS-L-elsbetiae_contig6984:1066..11271691683802.959539-CDS-L-elsbetiae_contig6984:1066..1127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 1067..1127 +
1622816774.2096543-CDS-L-elsbetiae_contig6984:1898..19721622816774.2096543-CDS-L-elsbetiae_contig6984:1898..1972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 1899..1972 +
1691683802.9765682-CDS-L-elsbetiae_contig6984:1898..19721691683802.9765682-CDS-L-elsbetiae_contig6984:1898..1972Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 1899..1972 +
1622816774.2210271-CDS-L-elsbetiae_contig6984:2839..30891622816774.2210271-CDS-L-elsbetiae_contig6984:2839..3089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 2840..3089 +
1691683802.987777-CDS-L-elsbetiae_contig6984:2839..30891691683802.987777-CDS-L-elsbetiae_contig6984:2839..3089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 2840..3089 +
1622816774.2348568-CDS-L-elsbetiae_contig6984:4108..42451622816774.2348568-CDS-L-elsbetiae_contig6984:4108..4245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 4109..4245 +
1691683802.9976144-CDS-L-elsbetiae_contig6984:4108..42451691683802.9976144-CDS-L-elsbetiae_contig6984:4108..4245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 4109..4245 +
1622816774.2483606-CDS-L-elsbetiae_contig6984:5271..53631622816774.2483606-CDS-L-elsbetiae_contig6984:5271..5363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 5272..5363 +
1691683803.0075102-CDS-L-elsbetiae_contig6984:5271..53631691683803.0075102-CDS-L-elsbetiae_contig6984:5271..5363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 5272..5363 +
1622816774.2607327-CDS-L-elsbetiae_contig6984:6991..70861622816774.2607327-CDS-L-elsbetiae_contig6984:6991..7086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 6992..7086 +
1691683803.0218189-CDS-L-elsbetiae_contig6984:6991..70861691683803.0218189-CDS-L-elsbetiae_contig6984:6991..7086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 6992..7086 +
1622816774.271033-CDS-L-elsbetiae_contig6984:8156..84661622816774.271033-CDS-L-elsbetiae_contig6984:8156..8466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 8157..8466 +
1691683803.0348089-CDS-L-elsbetiae_contig6984:8156..84661691683803.0348089-CDS-L-elsbetiae_contig6984:8156..8466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 8157..8466 +
1622816774.2819462-CDS-L-elsbetiae_contig6984:9586..97431622816774.2819462-CDS-L-elsbetiae_contig6984:9586..9743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 9587..9743 +
1691683803.0459569-CDS-L-elsbetiae_contig6984:9586..97431691683803.0459569-CDS-L-elsbetiae_contig6984:9586..9743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6984 9587..9743 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6984.15765.1prot_L-elsbetiae_contig6984.15765.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6984 98..9743 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6984.15765.1

>prot_L-elsbetiae_contig6984.15765.1 ID=prot_L-elsbetiae_contig6984.15765.1|Name=mRNA_L-elsbetiae_contig6984.15765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=439bp
TSLCGQPEAGEGDRTVPASGPPRRRARPLRRNSDRRRVRDCQASQGEVGG
GPQHGRRSHARARADRQGRTPRTAGGQHRRRRAAAGSEVHQPVRPGRGGG
KPPPPRARRRRQRRRRRHRGGVARRGGGRWRRQGQGQGQGRHRCNRGGRA
AGCRRRVEAVGLYGPRGAVYGRAGRGARLLGDDGGREREAAPAGPGGAPG
TPGRDVRGHVKVSARRARQRGACGVPPRERAVPAGAASGWALGGMAVAHE
DRAGDRGADGYRERLPLLGRGGCALGGRGGVVGGLAPRPGDKVVHQGVPG
AQSFALQTRGRWGRWRRRDSGGALRGRAGGGRAREGQGEEGRERGGGGGA
GGRRRGRRGRGVGRGLRGQGGRERARARSSRACGGEVAAAAAAAAAAAAA
AAAAAGEAVPGGVQARVGGALVRGGLRRRLREPRRPAAK
back to top

mRNA from alignment at L-elsbetiae_contig6984:98..9744+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6984.15765.1 ID=mRNA_L-elsbetiae_contig6984.15765.1|Name=mRNA_L-elsbetiae_contig6984.15765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9647bp|location=Sequence derived from alignment at L-elsbetiae_contig6984:98..9744+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGTTTATGCGGACAGCCTGAAGCCGGCGAAGGAGACCGCACAGTCCC
GGCCTCTGGGCCACCGCGGAGGCGTGCGCGGCCGCTCCGCCGGAATAGCG
ACCGCCGCCGCGTTCGGGACTGTCAAGCTTCTCAAGGAGAGGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTTTTTATTCGTGAT
TTGTGTGTGTTGGCGGGTCTGGGGCGTATGGTTGTGGGGGTGTTTAGGGC
GGGGGGGGGGGGGGGTGCTCGGTGGCGGGGGGGAGAAAGAGATGGAGGGA
GTGCAGTGTGTTCCCGATCAAGGCCTGGCAGTGGGGGATCAAGGCCTGGC
AGTGGGGGCTGAATAAATAGACTAAGTGCGTGCGTGCGTGTGTGTGTTAC
CAAAGAAAAACAGTTAAATCAAAAATGGAACCTAACCCACAATGGAGACG
AGACTCCCGTGAGACTACATCGGCATTCCATATAAATAGTGACCTAATAT
TGGACCACCCCAGCAGAGAAACACCTAAAATGTTGAAAATGTATATCACC
TCCCTCCCCCCTGTGTTATCTTTCACAAACTTGTGAGACGCTTATGGTTT
TGATGTGCGTTCCTCATCGGCTGTCAAGAAAGGGGATAACTGCGGGCGTG
GTTGAGTGAGGTGGCGCGTTACGTGCGGCGTATGTGCGAGAGAGGGTCCG
TGTTGGATTAGGTTTGTTTGGTGTCTGACGCCGCCGTTTGCGTTTTGTCG
TTTGCTCTCGTTCGCTTTGATCTTCCCGTTGTTTTCTTCTTGTGTATTCT
TCTGTTTCGCCTCTTCGCCCTTCTGCTGCCATTTTTGCTCTCTCTTCTTT
TGTCTCTCTTCTTGAAATATCTACTTTTTTTTATATATATTGTTACTTCT
ATTACATATCCCCGGCCACGGCTGCTGTTTTCGCTCTCGCTCCGCGGTCG
TGGCGATGCGGCGGGTTAGGTCGGAGGAGGCCCGCAACACGGCCGTCGTT
CTCATGCTCGTGCTCGAGCAGATCGACAGGGTGAGTTGGCCGAAAACGAC
GCAGTTTGTACATTTTGCCTGTAGACTTTCAGGCGCGGGGTTTTTTCGAG
TCTCGATGCCGATATCAGCATGCAGGCTTCGGGCAAATGCTGCAATCTTG
GAATCTGCGACAACAGTGGAACGTCCTGTCCATAAACGACACGTCCGCAG
GTGTACGGCACCTGAACTTCGGCCTTTTAATGTTATGGTCTGCACCTTTT
TGTATCAACCTACGGTAGATCTCTGCGATTTTCCCGCCGAGACTGGGCTA
TTTACACAGGTTGGACGTAGACCGTTGGCGTTTGTAGAGCATTTATTACG
ACATCGTTTAGCAACGCACGGCAGGAACCGCTTTCGAGGTGGAACAAACA
CGAAAGAGTTTAGTTTGGAGTGTATCGTAATAATAATAATAATAATAATA
GTAACAATAGTAACAATAATAATAGTAATATTATTGACAAGAGTACCCTC
TTGGTTGTGGAGAAAATCGGCAAGAAAGTCCCCCCCCCCCCCTGTGGGGG
CGACTAAATGTGTATGGTATAAAAAAGCATTTTTCACTATACCCTGTTTA
GGTCAAGTTATTCCGTGACCACGGGAATCGACCGCGTCAGTGTTGGATTA
GTACGAACTCGTGGAGGCGCACTGGATATTTAGAGAGATCGGAACGGTTT
TTAATGTGACGACAACGACGACAACGACAACAGCAACAGCAACGGAAATG
TTGTTTTGTTTTGTTTTGTTTTGTTTTGATGACTCTTGTTTGATGCCACA
GGTCGGACTCCCCGAACAGCTGGAGGCCAACATCGTCGCAGACGCGCTGC
CGCTGGCTCTGAAGTACATCAACCAGTGAGTTAGCTCTTTTTTTCTACAC
ACATACATACCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGG
AGGAAGGGGGGCCAGTGGGGCAGACGACGAATAAATTAGCCAAAATGGGA
GAAAAACAAAAACACAAAAAAACACAAAAAACAAAAAAATACCTAGGCCC
GCCCACACGAGGAGTCGTAGTGGAAGAAGGGGGCCAGTGGGGCAGACGAG
ACGAATAAATAGGCCAAAAATGGCAGGGAAAAAAAATAAAAATAAAAAGA
CGTATGCTTGTACACACGTCGGATTAATTACAGAATATGTATGTAGCGGC
ACGACGGCCGAGATACTTGGACTTTTATTTTGCGCTTTGAAACGAGCACA
CGGAAAAAGTGTCCTATTCTAATGTATATACAAATGTAAACATTGCGTTG
TTAGACCTCACCGTCGACGAGGGAAAGGGAAGGCTGAACCCTTCTCGCGA
CGAAAAATCTGAGGCAAGCAACCGCGGATGGGGGGGTGTGGGGGGCCTCG
GGGAGAGGAGCCCGTCTGTGTTTCTGTGTGACCACGAGTCAGTACTCTGG
CAGAACGTCTGTCGTGCCGAGGAGCATCTATTGTATTCAGTGCTGGCAAT
AGATGTGAAGGTTAAAAAAAAAAAGTGTATGGATGTACGTACGTATGTAG
GATCGTTTTTTTTTCCCAGAAAAATATCGAAGGGGGCACCTGAAGGGCGA
TACTTGTCTCGACCCCCCCCTTTCCGTCTGTGGATAATCAGTATCGCCGT
GGATAGCTATGTATTAAACCACCCCCCTACACCACCACGCTCCTGCCCTC
TCCATCGCTACCCCTCCCCCCCTTCCTCCTCCTTCGCGGCAGGTACGCCC
TGGCCGCGGAGGTGGGAAGCCACCACCTCCGCGTGCCCGGCGGCGGCGGC
AGCGGCGGCGGCGGCGGCACCGTGGCGGTGTCGCTAGGCGCGGGGGGGGG
CGTTGGCGGCGGCAGGGGCAGGGGCAGGGGCAGGGGCGGCATCGGTGCAA
TCGGGGGGGGCGCGCAGCCGGCTGCCGTCGCCGCGTCGAAGCCGTGGGGC
TGTACGGCCCTCGAGGGGCTGTTTATGGACGGGCAGGGCGTGGTGAGTGG
TGTCGGCTGTGTGTGTGTGTGTTTTGTTTTTTTTCCGTTCGTTTGGATAC
ACCGAGGTATCCTGAAATAAAACCTTTTTTTTTTAATAGACAAAACCTTT
TTTTCTTCCAGTCAGCGCTGACTGGTCTAATGGTTTGATTTCGGCTCAAT
CTACACTTTAGAAGTATAAATATAGCCATAACAGCCGCACGCACCACAAC
GGCAAGAAAACGGGGGCGTACGTGCGCCGTTACAGAAACAGCGCGAGAAA
ACCGCAAGAAAAAGGGTATCTACAACACAAGTTCCCGTTTTCCGCACAAA
ACTTGGGGGTGGTCACAACGACCACAGCGACCACGGCGATGTGATCTCCG
GAGAGGGAGAGAGACACCGCCCGTGGCAGGCAACCGCGTGTTGTCTTTGC
TCTTGACTCGCCGTTTTTTAATTAATGTATATATACAAAGTGTCCGTAGT
CTTACGTATGTACGCCCAGTCTGCGAAAAATGTAAAGAGGCGTTCCAGTC
TGTGAAAAATGTAAAGAGGCGTGTCCAGTCTGCGAAAAATGGAAAAAAGC
GTGTCCAGTCTGGGAAAAATGAAAAGAGGCGTTCCAGTCTGGGAAAAATG
GAAAGAGGTGTGTCCAGTCTACGAAAAATGGAAAGAGGCGTTCCAGAGGG
ACTGCTGTTGTAGGCATACTAACCCCCTTTTTCCCGTCCAAGATATATTC
GCTCGCACAAAGTCCGTAATCCGTATACTTCGAAGTATGTATATAAATAC
AGCGGCAGTTTTTTTTATCGTGTCATTGTCTCCCCCCCCCCCCCCCCCCC
CCCCCGGGGCTGTTTCCCCCCCCCCCCCGAAAGGGGGAAAGACAACGGGG
GGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNGCTCAAAGCTCGTAAT
TCGTATACTTCGAAGGATTTATATAAATCCACCCGCATTTTTTTTTTTCG
TGTCATCGCCCCCCCCCCCCCCCCCCCATCTCTGGGTCTGTTCACGCCGA
CGCCATGAAAGGTGCAAGACTACTGGGCGATGATGGCGGGCGCGAGCGAG
AGGCAGCGCCTGCTGGGCCTGGGGGGGCTCCCGGCACTCCTGGCCGGGAT
GTGCGAGGGCACGTCAAGGTCTCCGCTCGGCGGGCTCGACAGCGGGGGGT
GAGTGAGAAGAGTACAGCAGTGCATACTGTAGTGTGTAACTGACGCTCGC
TCATGGCGTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTTCTTCACTTTAGAAACCGTTCCTATTTCTCCACCCATTAG
TACCTCCCTATGGGCGTATACTATTCCAACACTTGATGCGGCCGATTCCC
GTGGTCACAGGCGAACTTCTACCTACCTAAAAAAAGATATTTGTATGTAC
ATAGACCACGAAAATGAAATTCAAAGACTGTGATGTTTTTTTTTCTTCGT
GCTTTCGGTTCGACTCTTTTTTGGTGTGGTAAGGATCCCATAGACACATA
TACAAATTGGTGTCTGGGAACTTCTGTTCCGAAATCTGAAGCAGTAGGCT
ATCGGCCTCCACTAGCCCCAAAACACGTCAGTATGACAGCAGCTGTTTTG
AGCATGGCAGCACATCTCAGGAGACTGGACAGCTATTGTACCTGATGAGC
ACAGACCGGCACAGCTCTGTTTGGTTCAAGGGAGCGGCAGCACAGAAAAT
AAGCAGTTGTTCGTTTGTTTCAGTATGCACAGCAGCTGCTGCTTCGGTGC
TCAAAACACAGCAGCAGCTGCTGTTTTTTTCAGTTGAAAATTTAGGAGTA
CTTCTGCTGCCTTCGCCTGTTTGCTTTCGTCTTGCATCATCCCCTGCCGC
TGTGCTCTCATGAGCTCGCTCCGAAGGGAGATCTTGTAAACATATATATA
TATATATAAAGAAGTGTGTATGGTACTTGTGTGAAAAAACGAAAAAAATC
CTTCCACGAGACACACGGGCCCCACAGCAGGCATGCCGTTCCCATGCTCA
GTGGCACATACATGGGTGTACCAAACAGGCGTGTCTGCGTATGTTCACAA
TTTAGTAATGGACAGCTCCGGTCTTTGAAAGACAGCCAGCCCCTCTCTTT
TTTTGGTTGTGCCGCTTCTTCGCATTTTGCGGCGGAAATGGTGCCGTTTC
GGAAACCGTTTTTTGTCATGCCAGGCTTGCGGCGTTCCTCCACGCGAGCG
AGCAGTACCAGCTGGCGCTGCCTCTGGTTGGGCTCTCGGCGGAATGGCAG
TGGCGCATGAAGATCGGTGAGTTGGGGTCACGAGCAGGGGGAGTGTGGTG
TGGTGGAGGTGTTGTACAACACCATAGTGCTCAGTGGTGGTCTTGTTTTT
TTTTTAAGTGGTGCTTTGCTGGTGGTCGTGCTGCTGTTCATCGCAGAGCG
GCAACGGACAGCGAGCAGCATTGCTCTAGCTTCCTTCGCCGTCGTCATGT
CAGTGTGCTGCCGCTTCTGCTGCTGCCGGTTGTGCTTCTGCTGCTGCCGG
TTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTTCTGCTGCCGACGTGGCTGCAGCCGTGTTTTCATTCTGG
TTCAGTTGGGCCGTTTTTTTTTAATGTGAAGACAGCAACGATATTTGTCC
GATTTGTCCGATTCGTCCGATTGGCAGCAGTCGATTTCAAAGCACCGCAC
GGCCGGTGTGGTGTGCGTGGTGGTATGTGTGCAGGCATTGATGTACCGTA
GGTGACACAAGATACCACACTCCCTGGACATATTCTCAAGGCTCGATTCC
TCCCCAGAAAGAAGAGTGCCGGTGCCGAAAGAGGGTGGCGTTGGTAAAGG
TCTCGCCCGAGGACAGTCCGAAAATGTGTCGTTTGGTGCTGGCACCCTCT
CTTGGTTACGGAGTATATAGGGGGGCTCTAAAAGTCGGTCCAGGGGGTGT
GGTATCTTGTGTCATGTCACCTACGGTATGTGATGTTCACTACCTACTAC
TGGTGTCGTTACGGCCTGCCTGCCGTGCAGACAGAAGTCGGTACCGTAGG
TGACACAAGATACCACACCCCCTGGATCGAATTTGAGAGCTCCATTACTC
CGTAACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGGACAGCCCTC
GGCTAGATCTTTCCAACGCCACCCCTTTCGGCACTAGCACTCTTCTTGCT
GGGGAGAAATCGAGCTTTGAAAATATGTCCAGGGGGTGTGATATCTTGTG
TCACCTACGGTATTTTCACCGTTGTCTCCAACCGAACGTACCCAGATAGC
CCTTCATCCCTTGGCTTCAGTAGCGTTCGCAGGTTTTACTGGAAGAAATC
ACGTGGGATGTATAAAGTATGGAAGGTGGGGCAAAAAAAAAAAGAAGAAA
AAAACCCCAGTGTTCACCTCCTCCTGTGTGACCCCGGTTGGTTCTAGTTG
TACAGACAAGTGCACTGCAAAGTGTAGCACCTCTAAGTACACCGCAAGGT
GTAGTACACGTCTCTCCACTTGGGGGGACTGTCGCCAAAATAAATGGGAA
GGACACACACACACACACACAAACCCCTCCTATGTGACCCCGGTTGGGTC
GTCTAGCTAGAATAGAAGTGGAGGATGGGGGCCAGAGGGGCAGACGACAA
AATCCAATAATGGGCAGACAAAAATAAAAAATAAAAAAAACATGGAAACA
CGGCTAAATAATGGGGGGTCAGTTTGGGATCAGGGTCAGGGTTACAAAAT
CCCTGTCTGTATTTCCTATATAATAGACAGGAATTCTTCGCCAAGACGTT
TCCTTGGCTTGCGCCCTTCCGTCTCCCCCTCTTGCACCCATCCCCACCCC
TCCCCGTCTCTCGTTTATTTCGCGGCGCTCCCAATATTTTCCAGAGCCGG
AGACCGCGGTGCTGACGGCTATCGCGAGAGGCTTCCTCTACTCGGCAGAG
GCGGCTGCGCGCTCGGAGGGCGGGGGGGGGTTGTCGGCGGTGAGTGATGC
ACGGAGCCTCCCGAGACAAAAAGAGCAACATGAGAGGGAAATAGACGGAA
AGATGGCTGGAGAGAGGGGAAAGAGAGAGGCAGAATTACGTTTTTTTTAT
TTTTTGCTCACGAAAACCAGCGCTCGGACGAGTTTTATTTTTATTTTTTC
TTGCGTTTACCGCTCGGACGAGGGTTTTAAAACCTTGGTGTACGCGCGCG
GCGGCCGTGTGTGTGTATGTGTATGTGTGTGTGTGTGTGTCCGATTGATG
CATCACCACGGCGTTGTTTTTTATATTTGACGTCCTGGCTGATATGTAGA
CGCCTTTTTTTGCGTGGGGGGTTGGTTACATGGGGTTTGAACCGACGTGA
CCAACAGAGAGTTGTTTGTAGTGGATCGACCCCTCGAGACCTGCCTTCTG
AAAGAAATGGGTGCTGCTGCTTGCGCATCAACCTGTGTGTTTGTGCGGGC
GTAGATACGTACGTACATACATAGCCCCCCCGGGCAAAACGCCTCCGGAA
CTTTTCTATACCCACAATTCGACGGTTTCACATTCAAAAATAAAACTCGG
TTTGTTGTGCCTGCTGCTTCAAACAAACCCGCCCATACATAGCTCCTCCG
GGCAAAACGCCTCCGGAACTATTCTAAACCCATAATTCGACGGTTTCGCA
TTCAAAATAAAACTCGGTTTGTTGTGCCTGTTGCTTCAAACAAACCCGCC
CATACATAGCTCCCCCCGGGTAAAACGCCTCCGGAACTATTCTAAACCCA
CAATTCGACGGTTTCACATTCAAAAATAAAGCTCGGTTTGTTGTGCCTGC
TGCTTCAATCAAACCTGCCCATACATAGCCAGCTCCCCCCGGCAAACGAT
CCCGCAGCAGCAGCTGGTACATCACACCCGCCCCCTACCTCCTCTCGGTT
TCCCTCTGCACGCACCACCGTATCTATGCTGCATATTAAGCATGCGAAGT
ATTACCCAAAACCTGAAAAGTATTCCCCCCCCCCCCCCCCCCCCCCATTT
TTTTCCCCCACCTCTCGTGTTATTCCATCTTTTTTGCCTCTCTCTCTCTT
CGCACGCAGGGCTCGCTCCTAGACCAGGCGACAAAGTGGTACATCAAGGC
GTCCCAGGCGCTCAGAGCTTCGCTCTTCAGACCCGGGGCCGGTGGGGCCG
GTGGCGGCGCCGAGATAGTGGTGGCGCACTTCGAGGACGCGCTGGAGGAG
GTCGAGCGCGTGAGGGGCAGGGTGAAGAGGGGCGGGAGCGGGGGGGTGGG
GGCGGTGCGGGGGGGCGGCGCCGGGGAAGACGAGGACGAGGGGTGGGGCG
AGGACTTCGGGGGCAGGGGGGCCGTGAACGCGCTAGAGCTCGCTCGAGCC
GCGCTTGCGGCGGAGAGGTGTGTGTTGTTGTGGTTGTGTTTGTGTGTTTG
TGTGTGTGTTGTGTGCGCGCGCGATCGGGCGGGCCTTTTTTCCATCCTCC
TCCTCCGTCTTATAGAAGCGGAAATTAAACCACTAGACTACTACTTTGGT
TTAATTCCCGCTTCTATAGTGTCTTTTTAATGAATGTATACAGATGTCAG
CAGTCTACGTCCAGTCTGCGAAACACTCGATCCTCTTGTGTGTGTGTCTG
TGTGTGTGTGTGTGTGTTTTCCCTCGTGTCGCTCGGAAGGCATGCACGTA
TGTACGTACACACGTAGCCTCTATATATAGCTTACGTCGCCCCCGGGGAG
TATGAGTATATTTAATCTGTGTGTGTGTGTTTCGGTTATGTACGAGAGCT
CTTCACAACAGCGCGCCCCTTTCCGTTGCAGGTGGTTGTGCCTGAGATGC
CCCATTTGGTCGGCCCTGGCGGGTTTGCTGTTGCTGCTCATGTTTTTGTG
TTTGTTCCTGTTGGTTTTGAGTGTTGTGTTGAGTTTCCGGCAGCAGCCGG
GGGGGGGACCACAGACCAGAACCAAAGGATTTGGTGGACTAGTGGGCCGA
GGCCGGTGCTTCGCTGACAACACTCGTGCTAGTTGTTGCTGTTGCTGTTG
TCGTTGTCGTTGTCGTTGTCGTTGTCGTTGTCGTTGTCGTTGTTGTCTTT
TCAATAAAAACCGTTCCGATCTCTCTGTCCAGTATGTACCTCCATAATGT
ACACACCGATCCAATATACTCTATACTACTGTGCCAGTGCTACATGGTGC
TGCATAGTGCCAGTACTGCGTGTACTTGTGTAAGAATATCCAATCCCGTG
TCGCCATCCAGCCGGGCCGGCGTTCTCTCCCAGCCGGCGGAGCCCCCTAC
CCCCCCCACCCCCCTTGGCCCGTGCAGACCAAGAGAGATTCGCGTGAGGG
GCACCGGTGCCTCGGCCTGCGGTCCCGTCGTTTCCCCCCCCCCCCCCCCC
GCCCTCCTACCGCGCGCCCCCCCTTTCCCCCCTCTTTTTCGATACGTATT
TATGTATTGATGTATCCCCGCGCGCGTGGGCAGGAAGCTTCGCCCAACAC
TGGGAGGGGGCGCCGCGGGGACAGCGGCGGCAGCAGCAGAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCGGCAGCGGCAGGCGAG
GCTGTGCCAGGTGGTGTTCAAGCACGCGTCGGAGGCGCTCTCGTTCGCGG
AGGCCTTCGGCGCCGTCTGCGAGAACCCCGTCGACCAGCAGCGAAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6984:98..9744+

>mRNA_L-elsbetiae_contig6984.15765.1 ID=mRNA_L-elsbetiae_contig6984.15765.1|Name=mRNA_L-elsbetiae_contig6984.15765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2634bp|location=Sequence derived from alignment at L-elsbetiae_contig6984:98..9744+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGTTTATGCGGACAGCCTGAAGCCGGCGAAGGAGACCGCACAGTCCC
GGCCTCTGGGCCACCGCGGAGGCGTGCGCGGCCGCTCCGCCGGAATAGCG
ACCGCCGCCGCGTTCGGGACTGTCAAGCTTCTCAAGGAGAGACGAGTTTA
TGCGGACAGCCTGAAGCCGGCGAAGGAGACCGCACAGTCCCGGCCTCTGG
GCCACCGCGGAGGCGTGCGCGGCCGCTCCGCCGGAATAGCGACCGCCGCC
GCGTTCGGGACTGTCAAGCTTCTCAAGGAGAGGTCGGAGGAGGCCCGCAA
CACGGCCGTCGTTCTCATGCTCGTGCTCGAGCAGATCGACAGGGTCGGAG
GAGGCCCGCAACACGGCCGTCGTTCTCATGCTCGTGCTCGAGCAGATCGA
CAGGGTCGGACTCCCCGAACAGCTGGAGGCCAACATCGTCGCAGACGCGC
TGCCGCTGGCTCTGAAGTACATCAACCAGTCGGACTCCCCGAACAGCTGG
AGGCCAACATCGTCGCAGACGCGCTGCCGCTGGCTCTGAAGTACATCAAC
CAGTACGCCCTGGCCGCGGAGGTGGGAAGCCACCACCTCCGCGTGCCCGG
CGGCGGCGGCAGCGGCGGCGGCGGCGGCACCGTGGCGGTGTCGCTAGGCG
CGGGGGGGGGCGTTGGCGGCGGCAGGGGCAGGGGCAGGGGCAGGGGCGGC
ATCGGTGCAATCGGGGGGGGCGCGCAGCCGGCTGCCGTCGCCGCGTCGAA
GCCGTGGGGCTGTACGGCCCTCGAGGGGCTGTTTATGGACGGGCAGGGCG
TGGTACGCCCTGGCCGCGGAGGTGGGAAGCCACCACCTCCGCGTGCCCGG
CGGCGGCGGCAGCGGCGGCGGCGGCGGCACCGTGGCGGTGTCGCTAGGCG
CGGGGGGGGGCGTTGGCGGCGGCAGGGGCAGGGGCAGGGGCAGGGGCGGC
ATCGGTGCAATCGGGGGGGGCGCGCAGCCGGCTGCCGTCGCCGCGTCGAA
GCCGTGGGGCTGTACGGCCCTCGAGGGGCTGTTTATGGACGGGCAGGGCG
TGGTGCAAGACTACTGGGCGATGATGGCGGGCGCGAGCGAGAGGCAGCGC
CTGCTGGGCCTGGGGGGGCTCCCGGCACTCCTGGCCGGGATGTGCGAGGG
CACGTCAAGGTCTCCGCTCGGCGGGCTCGACAGCGGGGGGTGCAAGACTA
CTGGGCGATGATGGCGGGCGCGAGCGAGAGGCAGCGCCTGCTGGGCCTGG
GGGGGCTCCCGGCACTCCTGGCCGGGATGTGCGAGGGCACGTCAAGGTCT
CCGCTCGGCGGGCTCGACAGCGGGGGGCTTGCGGCGTTCCTCCACGCGAG
CGAGCAGTACCAGCTGGCGCTGCCTCTGGTTGGGCTCTCGGCGGAATGGC
AGTGGCGCATGAAGATCGGCTTGCGGCGTTCCTCCACGCGAGCGAGCAGT
ACCAGCTGGCGCTGCCTCTGGTTGGGCTCTCGGCGGAATGGCAGTGGCGC
ATGAAGATCGAGCCGGAGACCGCGGTGCTGACGGCTATCGCGAGAGGCTT
CCTCTACTCGGCAGAGGCGGCTGCGCGCTCGGAGGGCGGGGGGGGGTTGT
CGGCGAGCCGGAGACCGCGGTGCTGACGGCTATCGCGAGAGGCTTCCTCT
ACTCGGCAGAGGCGGCTGCGCGCTCGGAGGGCGGGGGGGGGTTGTCGGCG
GGCTCGCTCCTAGACCAGGCGACAAAGTGGTACATCAAGGCGTCCCAGGC
GCTCAGAGCTTCGCTCTTCAGACCCGGGGCCGGTGGGGCCGGTGGCGGCG
CCGAGATAGTGGTGGCGCACTTCGAGGACGCGCTGGAGGAGGTCGAGCGC
GTGAGGGGCAGGGTGAAGAGGGGCGGGAGCGGGGGGGTGGGGGCGGTGCG
GGGGGGCGGCGCCGGGGAAGACGAGGACGAGGGGTGGGGCGAGGACTTCG
GGGGCAGGGGGGCCGTGAACGCGCTAGAGCTCGCTCGAGCCGCGCTTGCG
GCGGAGAGGTGGCTCGCTCCTAGACCAGGCGACAAAGTGGTACATCAAGG
CGTCCCAGGCGCTCAGAGCTTCGCTCTTCAGACCCGGGGCCGGTGGGGCC
GGTGGCGGCGCCGAGATAGTGGTGGCGCACTTCGAGGACGCGCTGGAGGA
GGTCGAGCGCGTGAGGGGCAGGGTGAAGAGGGGCGGGAGCGGGGGGGTGG
GGGCGGTGCGGGGGGGCGGCGCCGGGGAAGACGAGGACGAGGGGTGGGGC
GAGGACTTCGGGGGCAGGGGGGCCGTGAACGCGCTAGAGCTCGCTCGAGC
CGCGCTTGCGGCGGAGAGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCCGCGGCAGCGGCAGGCGAGGCTGTGCCAGGTGGTGTTC
AAGCACGCGTCGGAGGCGCTCTCGTTCGCGGAGGCCTTCGGCGCCGTCTG
CGAGAACCCCGTCGACCAGCAGCGAAAAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCCGCGGCAGCGGCAGGCGAGGCTGTGCCAGGT
GGTGTTCAAGCACGCGTCGGAGGCGCTCTCGTTCGCGGAGGCCTTCGGCG
CCGTCTGCGAGAACCCCGTCGACCAGCAGCGAAA
back to top