mRNA_L-elsbetiae_contig6967.15741.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6967.15741.1
Unique NamemRNA_L-elsbetiae_contig6967.15741.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI)

HSP 1 Score: 550 bits (1416), Expect = 2.680e-190
Identity = 300/345 (86.96%), Postives = 321/345 (93.04%), Query Frame = 1
Query:    1 QSQVVPTMELLQRLGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETYMDNRWAIR 1035
            + QVVPTMELL++LGMRPTDVRRVIRKAPEVLAPR DGSTAAEAVDVL  LG RRRHL+MEA RWPQLLAVPPGSFFQLAAFLASEEVGIK+TN  SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVERV+RAYPKVLCASI+GELAPRVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXX     ERERHM GVV YLK+LGVQN+GRFVSRLPPVLGYDV+TNL PKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFL IRGRPITLVG+NIAL QGDADFARKVA+VQPRVY++FK+ Y++ R A++
Sbjct:  271 EGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLAVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVVDVERVLRAYPKVLCASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXSLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVK 615          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE)

HSP 1 Score: 544 bits (1402), Expect = 2.490e-182
Identity = 299/345 (86.67%), Postives = 320/345 (92.75%), Query Frame = 1
Query:    1 QSQVVPTMELLQRLGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETYMDNRWAIR 1035
            + QVVPTMELL++LGMRPTDVRRVIRKAPEVLAPR DGSTAAEAVDVL  LG RRRHL+MEA RWPQLL VPPGSFFQLAAFLASEEVGIK+TN  SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVERV+RAYPKVL ASI+GELAPRVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXXX    ERERHM GVV YLK+LGVQN+GRFVSRLPPVLGYDV+TNL PKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFL IRGRPITLVG+NIAL QGDADFARKVA+VQPRVY++FK+ Y++ R A++
Sbjct:  731 EGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLVVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVADVERVLRAYPKVLSASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXXLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVK 1075          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA)

HSP 1 Score: 368 bits (945), Expect = 1.760e-122
Identity = 198/346 (57.23%), Postives = 253/346 (73.12%), Query Frame = 1
Query:   10 VVPTMELL-QRLGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTAS------LIRQAPWLVLQPIDGQMLPVARFLRIA-GVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETYMDNR 1023
            VVP MEL+ Q LG RPTD RRV+R+AP+VL PR DGST  + +  L ALG + + + ME  RWP+LL   P S  +LA +L S EVG++A +  S      ++RQAPWL    ++ Q+ PVAR+L+ + G+ D++RV+RAYP++LC SI  +L PRV FL  +VG++EED+PRV+QTFPLLFA+P+ RM+ V            XXXXXXXXXXX     E E+H+  VV Y++ LG+QNIGRFVSRLPPVLGYDV  NL PKMDYLV  MGLSVYDVLTFPAYFSYPL+++IEPRTEFL +R RPI +VG+N+AL  GDADFA+K+AKV+P +Y  FK  YM +R
Sbjct:   17 VVPVMELMRQELGFRPTDARRVLRRAPQVLLPRQDGSTPVDTIAALQALGLKPKMVSMEVIRWPRLLTYSPASLMELATWLGSAEVGMRAASDDSSAVSLNVLRQAPWLAEHDLETQLRPVARYLQESLGIRDMQRVLRAYPQILCCSITKDLEPRVWFLTEEVGINEEDVPRVVQTFPLLFAVPVERMRGVYGLLASELLITRXXXXXXXXXXXSLLGLEPEKHVRAVVAYMRSLGIQNIGRFVSRLPPVLGYDVSNNLMPKMDYLVAMMGLSVYDVLTFPAYFSYPLESIIEPRTEFLKLRRRPIAVVGLNMALTSGDADFAKKIAKVRPELYASFKAAYMKHR 362          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A7S2D3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3S4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.300e-52
Identity = 121/373 (32.44%), Postives = 178/373 (47.72%), Query Frame = 1
Query:   13 VPTMELLQR-LGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDV--------------------------------------GVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIR-GRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETY 1011
            V T+ +LQ    +R  D+RR+ R  P +L      S   E +  L  +    ++L++   RWP++L     +   L+ FL+  +VG K     SL+R+APWL+   ++ QM PV RFL    V  +E V+RAYP+VL   +K EL PR+ FL  D+                                      G++ E + +V ++FP L  L                                    +   H +  V +L+++GV+NIGRFV RLPPVLGYDV+ N+ PK +YL + +GLS YD+  FPAYFSYPLD VI PR  +L+ R  R  ++ G+N  L   D  FA KVA      Y  ++ ++
Sbjct:  152 VQTLTILQNTFELRRYDLRRIARSEPTILLK----SDLTETLQALNDMKLSGKNLKLTLLRWPKILTYSTTTILNLSGFLSHPQVGFKEDQIGSLVRKAPWLLDGNLETQMGPVVRFLTKLQVRRIETVIRAYPQVLLTDVKTELLPRIEFLMKDLDLSLADASSXXXXXXXXXXXXXXXXXXXXXXXLSNDRLGIAPESVSKVFRSFPSLLGL------------------------------------DTVEHFDVSVSFLQEIGVENIGRFVLRLPPVLGYDVEINMRPKWEYLTDTLGLSTYDITRFPAYFSYPLDKVIMPRASYLSDRCNRKASIWGLNTILTLSDDAFAEKVALTSKEEYAAYRASF 484          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A7S3YEI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEI3_HETAK)

HSP 1 Score: 188 bits (478), Expect = 2.010e-51
Identity = 120/326 (36.81%), Postives = 175/326 (53.68%), Query Frame = 1
Query:   40 LGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERH-MNGVVLYLKK-LGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETY 1011
            +G+R ++VR+V+R+AP++LAPRADG++AA+    L  +G R R LR      P+LLA  P + F+ +AFL S++VG +A +  +L ++APWL  +P+  ++  VAR+LR  GV DVE V R YP+V    ++ EL     FL  +VG++      V+Q +P   AL L   + V+A                             R  +  VV YL++ LGV+  GRFVS                         GL  +D+L FPA  +YPL+ VI PRTEFL +  RP+  +G+N AL  GD DFA KVA  +P  Y+ FK+ +
Sbjct:   92 VGLRRSEVRKVVRRAPQLLAPRADGTSAADTAAALALVGLRPRALRAALVAHPRLLAHTPRAVFECSAFLMSKDVGAQAAHLGALYKRAPWLPGRPV-AELRAVARWLRQIGVEDVENVFRGYPEVALRDVE-ELDAAFLFLLEEVGLAPLQAALVVQAYPSALALDLGAARGVLAYLSGPELGLSAAERRRVLRAFPSLLAAPVRGGLAPVVAYLREELGVRAPGRFVSAAXXXXXXXXXXXXXXXXXXXXXXXGLGAFDLLRFPACLTYPLEEVIAPRTEFLALCRRPVGQLGLNKALAPGDDDFAAKVALTRPETYQLFKKAF 415          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A7S2Y096_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y096_9STRA)

HSP 1 Score: 179 bits (455), Expect = 3.870e-50
Identity = 121/324 (37.35%), Postives = 185/324 (57.10%), Query Frame = 1
Query:   73 IRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSD----------VGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETYM 1014
            +++ P+V+ PR DGST A+ +     +GF+ +       + P L+  PP   F +++++ S++V IK     SL R+APWL+ Q ++  M  V R+L   G    E+V RA+P+VL  +IK  L     FL  D           G+  ED+P+VL+ FP L +  +    D +           XXXXXXXXXXXXX   + E  M  VV++L+  G++++G  ++RLP +LGY V   + PK++Y  E M L + ++  FPA+FSYPL+T I+ RTEFL I G  I+ VG+   L   D DF++KV KV P+ ++ FK +Y+
Sbjct:    1 VKQIPQVMVPRKDGSTIADTIKAFGMIGFKGKSFLNTVMQHPSLILHPPLQVFLVSSYMMSKQVRIKRNGLGSLYRKAPWLLDQNVE-DMRKVGRWLTNIGXXXXEQVFRAHPEVLLQNIKQTLDRVYNFLVDDSDFDKGTGGGAGLDPEDVPQVLELFPRLLSAGMPEHIDRVRHYMRSVGIPDXXXXXXXXXXXXXLTLDIE-DMQQVVVFLRGAGMESVGEMLTRLPSILGYSVSA-IAPKLEYFTEYMDLEIEELERFPAFFSYPLET-IQTRTEFLAILGNSISGVGLRRVLTPSDDDFSKKVVKVNPKFFQLFKNSYL 320          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: R7Q6P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P9_CHOCR)

HSP 1 Score: 172 bits (435), Expect = 1.980e-45
Identity = 132/322 (40.99%), Postives = 189/322 (58.70%), Query Frame = 1
Query:   67 RVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLR----IAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDV-GVSEEDLPRVLQTFPLLFALPL-SRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKETYM 1014
            RVI + P++L          +AV+ L   G R + ++   QRWP LL +      ++ AFL +  VG    N  SL+R+APW+++  I  +M+P   +L+    +     V++ +RA P +L  S   +   +V    SDV G++   L   L++FP L    + + +     XXXXXXXXXXXXXXXXXXXXXXXXXX         V Y ++ G+ N+GR V RLPP+LGYD+ TN+ PKM+Y+ +++GLS YD+LTFP YFSY  +  IEPRT+FL  +GR +T  G+N+AL   D DF  +VAKV    Y  FK  ++
Sbjct:  147 RVIIRRPDILK---SPEHLRKAVEALETSGLRLKDIKTVVQRWPGLLLLDARKINRVTAFLQTPAVGFSLPNLRSLLRRAPWVLVYDIGSEMIPAISYLKRVLDLPNRAPVDQFIRARPLLLGTS--PDAMQKVTDFMSDVVGLTPTMLSVALRSFPPLLTCSIDATLAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNYFRRKGIINVGRIVKRLPPILGYDLDTNIIPKMEYIEQELGLSSYDILTFPGYFSYSFEKCIEPRTKFLQAKGRSVTESGLNMALGLKDEDFCVRVAKVPISQYYAFKAAFL 463          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A6U2R904_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2R904_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.890e-45
Identity = 132/346 (38.15%), Postives = 178/346 (51.45%), Query Frame = 1
Query:   28 LLQRLGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQ-----------------------------APWLVLQPIDG---QMLPVARFLRIA-GVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKV 966
            L Q LG+R  D R+VIR  P +L P+   S AA+ VD+L +LG  R  L  +    P LL+  P S F+LAAFLAS  V +       L+R+                                LV + ID    +M   A  LR   GV DV +VV A+P VL      ++AP VRFL  +V + +ED+P+VL+ FP L +  + +++  +A              XXXXXXXXX   +    M  V+ +L ++GV N+GRFV+RLPP+LGY V+  L PK  Y  E  G   +DV+ FPA FSYP D +I  R E+L  R  P   VG++  L  GD DFAR V
Sbjct:  287 LCQTLGLRRYDSRKVIRTCPGLLTPQGANS-AAQIVDMLSSLGVSRSALARDKTSLPSLLSRQPSSLFRLAAFLASNLVRLPTDKVGPLLRRHGSSSLLNSVVPLEYSLKLQANENVGEAIVSRLVREEIDDAYRRMKLSAEVLREEFGVDDVAKVVTAFPDVLLLDSPTQIAPVVRFLRDEVYLKDEDIPKVLEAFPTLLSADVEQLRKRVAFLGSLDIVPDNLSKXXXXXXXXXFL-DVSTQMIPVIQFLVEIGVVNLGRFVTRLPPILGYSVERELRPKWQYFKE-FGFDYFDVVRFPATFSYPFDRIIVTRFEYLKTRNIPPKAVGLDKILSSGDTDFARIV 629          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN)

HSP 1 Score: 168 bits (425), Expect = 7.080e-44
Identity = 143/366 (39.07%), Postives = 190/366 (51.91%), Query Frame = 1
Query:   19 TMELLQR-LGMRPTDVRRVIRKAPEVLA-PRADGS-----------------------------TAA--EAVDVLYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVLQPIDGQMLPVARFLRI-AGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERH---MNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGVNIALQQGDADFARKVAKVQPRVYREFKE 1005
            T++ L +   MR  D+R+V+R+ P++L  P AD S                             TAA  + V +L ++G R +H++    RWPQLL++       +  ++ S  +G +  +  SL R  PWL+  P+   +   A  LR   GVT+VE VVRAYP+ L +  +  L P +  L    GV E DL  +++ FPLLF L      D M              XXXXXXXXXXXXX        M   V +L+ +GV N  RFV+RLPPVL YDV  +L PKM  LV K  LSVYDV+ FPAYFSYPLD VI+PRT FL   G PIT   +      GD +FA +V  V P+ Y  FK+
Sbjct:  124 TVQFLSKTFAMRKYDLRKVVREQPKILLKPAADASIFDTGACPAVLAATSGGPAAGPRSGDLDATAAISDTVLLLTSVGVRTKHVKEMVVRWPQLLSIEMPQMLAVTDYINS--LGFER-SIGSLYRANPWLLAAPV-ATVRDAATVLRDEVGVTNVENVVRAYPRALLSDRESLLRP-LDVLRERAGVDEADLASLVEAFPLLFGL-----DDAMGPVLDFWLDELKINXXXXXXXXXXXXXXXXXXVATMRANVKFLEGIGVVNTARFVTRLPPVLAYDVDRDLRPKMAELV-KCALSVYDVVRFPAYFSYPLDGVIKPRTAFLKQLGVPITTFPLQALFTPGDKEFASRVLGVDPKRYAAFKK 478          
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Match: A0A7S3JTN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 9.710e-39
Identity = 122/376 (32.45%), Postives = 172/376 (45.74%), Query Frame = 1
Query:   85 PEVLAPRADG------STAAEAVDV-------LYALGFRRRHLRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKAT-----------NTA---SLIRQAPWLVLQPIDGQMLPVARFLRI-AGVTDVERVVRAYPKVLCASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPI-----------------------------------TLVGVNIALQQGDADFARKVAKVQPRVYREFKETYMDNR 1023
            P VLA  A G      ++    VD+       L  +GFR R ++    RWPQ+L +       +  FL+S  VG               NTA   +L RQAPWL+   +  Q+ PV  FLR  AGV  ++ V+ A+P+        EL PR+  L    GV+E    ++++TFPL+  L +S   D +                              + M   + +L+++GVQNI RFV+RLPPVL YDV++ L PKM + V+   LS+YDV+ FPAYFSYPLD VIEPR  FL  R RPI                                     +G++  L   D  FA K+A   P+ Y +FK+ ++  R
Sbjct:  157 PAVLATVAGGPIFNIRNSTCSPVDIIRDIIFFLQGVGFRDRRIKELLVRWPQILTIEMPQLLAVTDFLSSN-VGFSTPALREKYPQFYQNTAPLSALYRQAPWLLAASVGSQLRPVTNFLRHDAGVQRLDIVISAFPRCFLLDPDRELRPRLYAL-KKYGVTEPG--KIIETFPLVLGLDVSEQTDPVIHFWLNEIGIHRDDIPKICRAFPSLLGVDVQTMQKSIDFLREIGVQNIARFVTRLPPVLAYDVESILRPKMTFAVQN-ALSIYDVVRFPAYFSYPLDQVIEPRAAFLQ-RHRPIDHKSSDAFKTAKRVTQNKSTKRPSYTYYSNTPIPLASIGLSRVLTPSDDAFA-KLANASPQEYAKFKQRFLQQR 525          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6967.15741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW7_ECTSI2.680e-19086.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUV8_9PHAE2.490e-18286.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z724_9STRA1.760e-12257.23mTERF-domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2D3S4_9STRA1.300e-5232.44Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3YEI3_HETAK2.010e-5136.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y096_9STRA3.870e-5037.35Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R7Q6P9_CHOCR1.980e-4540.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6U2R904_9STRA7.890e-4538.15Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0Y3H4_AURAN7.080e-4439.07Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3JTN4_9STRA9.710e-3932.45Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6967contigL-elsbetiae_contig6967:631..7116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score546.6
Seed ortholog evalue8.2e-153
Seed eggNOG ortholog2880.D7FXW7
KEGG koko:K15032
Hectar predicted targeting categoryother localisation
EggNOG free text desc.termination of mitochondrial transcription
EggNOG OGsKOG1267@1,KOG1267@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Ec32 ortholog descriptionMitochodrial transcription termination factor
Ec32 orthologEc-16_005120.1
Exons7
Model size1035
Cds size1014
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6967.15741.1prot_L-elsbetiae_contig6967.15741.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6967 652..7116 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.7979138-UTR-L-elsbetiae_contig6967:630..6511622816771.7979138-UTR-L-elsbetiae_contig6967:630..651Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6967 631..651 +
1691683801.228773-UTR-L-elsbetiae_contig6967:630..6511691683801.228773-UTR-L-elsbetiae_contig6967:630..651Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6967 631..651 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.8105478-CDS-L-elsbetiae_contig6967:651..7681622816771.8105478-CDS-L-elsbetiae_contig6967:651..768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 652..768 +
1691683801.2417395-CDS-L-elsbetiae_contig6967:651..7681691683801.2417395-CDS-L-elsbetiae_contig6967:651..768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 652..768 +
1622816771.825526-CDS-L-elsbetiae_contig6967:1609..17321622816771.825526-CDS-L-elsbetiae_contig6967:1609..1732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 1610..1732 +
1691683801.2517958-CDS-L-elsbetiae_contig6967:1609..17321691683801.2517958-CDS-L-elsbetiae_contig6967:1609..1732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 1610..1732 +
1622816771.8418064-CDS-L-elsbetiae_contig6967:2728..29201622816771.8418064-CDS-L-elsbetiae_contig6967:2728..2920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 2729..2920 +
1691683801.2665343-CDS-L-elsbetiae_contig6967:2728..29201691683801.2665343-CDS-L-elsbetiae_contig6967:2728..2920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 2729..2920 +
1622816771.8554347-CDS-L-elsbetiae_contig6967:3922..40891622816771.8554347-CDS-L-elsbetiae_contig6967:3922..4089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 3923..4089 +
1691683801.2758582-CDS-L-elsbetiae_contig6967:3922..40891691683801.2758582-CDS-L-elsbetiae_contig6967:3922..4089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 3923..4089 +
1622816771.8670177-CDS-L-elsbetiae_contig6967:5119..52731622816771.8670177-CDS-L-elsbetiae_contig6967:5119..5273Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 5120..5273 +
1691683801.2859018-CDS-L-elsbetiae_contig6967:5119..52731691683801.2859018-CDS-L-elsbetiae_contig6967:5119..5273Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 5120..5273 +
1622816771.8774354-CDS-L-elsbetiae_contig6967:6574..66931622816771.8774354-CDS-L-elsbetiae_contig6967:6574..6693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 6575..6693 +
1691683801.2975056-CDS-L-elsbetiae_contig6967:6574..66931691683801.2975056-CDS-L-elsbetiae_contig6967:6574..6693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 6575..6693 +
1622816771.8879275-CDS-L-elsbetiae_contig6967:6974..71161622816771.8879275-CDS-L-elsbetiae_contig6967:6974..7116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 6975..7116 +
1691683801.3072958-CDS-L-elsbetiae_contig6967:6974..71161691683801.3072958-CDS-L-elsbetiae_contig6967:6974..7116Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6967 6975..7116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6967.15741.1

>prot_L-elsbetiae_contig6967.15741.1 ID=prot_L-elsbetiae_contig6967.15741.1|Name=mRNA_L-elsbetiae_contig6967.15741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp
MELLQRLGMRPTDVRRVIRKAPEVLAPRADGSTAAEAVDVLYALGFRRRH
LRMEAQRWPQLLAVPPGSFFQLAAFLASEEVGIKATNTASLIRQAPWLVL
QPIDGQMLPVARFLRIAGVTDVERVVRAYPKVLCASIKGELAPRVRFLWS
DVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAFLTEDLAINRKDTAKIIR
AFPSLLGLERERHMNGVVLYLKKLGVQNIGRFVSRLPPVLGYDVKTNLTP
KMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLNIRGRPITLVGV
NIALQQGDADFARKVAKVQPRVYREFKETYMDNRWAIR
back to top

mRNA from alignment at L-elsbetiae_contig6967:631..7116+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6967.15741.1 ID=mRNA_L-elsbetiae_contig6967.15741.1|Name=mRNA_L-elsbetiae_contig6967.15741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6486bp|location=Sequence derived from alignment at L-elsbetiae_contig6967:631..7116+ (Laminarionema elsbetiae ELsaHSoW15)
CAATCTCAGGTGGTGCCGACGATGGAGCTGCTGCAGCGGCTCGGCATGCG GCCGACGGATGTGCGTCGTGTCATCAGGAAGGCGCCGGAGGTGTTGGCCC CGCGTGCCGACGGGAGCACGGCGGCGGAAGCGGTGGACGTGAGTTTTAAT TTAACCCCCCCGGGCGGTCGTGGCAGCAGTAGAATGTTGCAGGAGCAGCA GCAGCAGTAGCAGCAGCAATATCGGCAGTAGGAGTAGTAGAGGAAATCGT GTTGAGAGTGTTTTGCACGGCTGGTTGTCTTATCCCGAGAGGATTCGGGT GTGTACGGAAAGGCTAAGGCTGGTTCAACTACTGTTTGCATGGGCTTTAT TGCCTTGCCGCAGGGGAACAGCAAGGGCTTGTGTCTAGCTCGTTTTCCGG GGTAAACATAATGTACACCCGGTATCCTGTTTGCGGAGCGGGGCAGTTGT TTTTGAAGCGAATCGGTGTGTAGCCATGTATATTATACTTCTATATGTTT ACTTCTATGTTTGTACTTCTTTGGCGACGCTTTGAGGCACCGTCGATCGA TCGACGTCATTGTAGCGCAACTGCGGCTGCTGCATTGCTTGTGGTCGGTA ACGTGCTACCCGTCATTGAATATTATAGGGTCGCACAGCAGCTGCTCATC ACATCAACGGGTGCCATTTGTGCAGGTTCATGTGTACTGTGTCGTGTGAT CCGATAGGAGACGGGCCTTTTCGTGATCGAGATTGGAGGTCCTCAGCTGA AAATGCGAGCGTCGGTTTTTGATGAGATGGAGAGCAAAACAGAAATGCTA CCCCGTGTACAGCAGTATGGTAGCGCTGTACGGTATGGTACATGCGTCGT TTGGGCTATTTTTCTACTTTAGCTCGAAATGCACAACGCGTGTTTATTTA TTTTGCCCAAACACGATCTCGCTTGTCGCGCATAAGTTTTTTATCTGTGA ACATATGCACGTGTATTTTATGCGAGCAGGTTCTCTATGCGCTTGGGTTC CGAAGGCGGCATTTGAGGATGGAGGCGCAGCGATGGCCGCAGCTGCTTGC GGTGCCACCCGGGAGTTTTTTCCAGCTGGCCGCTTTTCTCGCTTCCGAAG AGGTGATTTTTGGGTTTATGTATGTATGTATGTACAACAGTGTAGAAGAT GGATTATCCTTTCACCACGTGTCTACATCTTGTTTCTTCTCTCTTCCCTT TGCTTTATTCTCTTGGGCTCTCTCTTATCTTCTCTCTATCTTCTCTCTCT CTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTGTCTCTGCCTGTCTTCACCGAGAGCTGTTTTGTTCCCTCTCTCT CTCTCCTCCTCACCCTCGCTCTCGCTCGCTCCCCGAAACTAGATGATGTG TTTTCATAAACTCGTCGTTCTTGTGTTGCCTTATTTTTTGATCTTGTGTT GTGTTTTTTGTGTCATCGGGGCTTTCTGAAAACGATGTCTCTCTGGCTCC CTCCCGCCCCATCGCCCCTGTTCGTACCATACATAGATGACACAAGATAC CACCCCCCCTGCACATATTTTCTAAGTTTGATTCCTCCCCAGCAAAGAGA GTGCCAGTACCGAAAAGGGATGGCGTTGGAAATATCTAGTCGAGGGCTGT CCGAGAATGTATCGTTTGGTGCTGGCGCCCTTTTCGTTATGGAGTAGTCG AGCTTTGAAGATCTGGCCAGGGGGGTGTGGTAATATCTTGTGCCATCTAC GGTAGAAGCCTCGCCGTTTCTTGGGGAAAAAATTGCCTCACGCGATTCCC GATTCCAAGATGGGCATCGAGGACGACAAGCCCAATCAATCCCTATCTCC AACAACCCCCCTAACCCCCTAAACCTGACCTCCCCAACCTCAGCCCTAAG GTGGGCATCTCGAACAACTAACCCCCTTCAGTCCTATCCTGCAACTCTTA ACACTAGCCGCTACCCTAACCGTCATTTTACCCCAAAACCCTGAGGGTGA GTATCCCGAACAACTACGAACAACCACGTTTTCCTAACCGCTAAATACGG TAGTACTCTAACCTCTTGCCCCAACCCCCAACCAACCAACCCTTTAAGGT GGGCATCAAGGCTACGAACACCGCTTCTCTCATCCGGCAGGCCCCGTGGC TGGTGCTGCAGCCGATCGACGGGCAGATGCTGCCGGTCGCCAGGTTTCTG CGGATCGCGGGCGTGACGGACGTGGAGAGGGTGGTGAGGGCGTACCCCAA GGTGCTCTGCGCGAGCATTAAGGGCGAACTGGCTCCGCGGGTGAGAGAAA GATTGGGGTTATTTTTGTTTTACTACCGTTCCTTTCCGGTCAAAAATGTC GGCCACAAAGTGAACCTACAACATGTATGTAGATCGTGCAAGTAAATATC GTGTCCCGAATATCTGATATTTGATGTTTTGGACATGGTTCGTGGTTTGT TCTGATGGAGATCAAGAAGTCTATGCATGTCCATGATGCCTGTCCGGCGT AACGAGAGGGAATACACAGTAAACAGCGGAATGCTAGCAGTGGTCAATTA AGGAAGATTCTGTCGGCATTTTAACCGCACAAAACATCAACAAACACAAC AACAACAACAACAACAACCACAACAACAACATTAACAACAGCAGCAGTCT AGTGCTTCGAAAATTCTCCATTGGAAGTTGTGGTGTGTGTGCGTTTTTTC AAGTAAGCGTCACAACAGTGGTGAACACGGCAAGATGAGCCAAGTCCACA ACTGGCACGAGAAGAAATGGTGTACTATGTATGTGCATAACTTCAAGTCA AGAACCATTGTGCTACTATGTAATCCTCGTCCGAATGTAGTGGCGCGGCT GGTGGATACAGTCAAGGCCTTGGTATGTAGCGTGGACTCACATGTGTTGA GCTCCTCTGCGGTGCCGCGTTCTGCGTATGTAGTACATCTACGGATTTTC CTAGTCTCTGGAGGTAAGAGACCCCGCGTATTTTTTTCAGCAAGAGTTGT AGTGAGGGTTCGTTTTTTTTTACCCTCGATATGCTTTCGATATGATGTAT GATGTATTTATGTAGTGCTCAACTACAGGCATAACCCGACAGCGTAACTG CGTTCTGTTCTATGTACCATGTACCCCTCCCCCCCCCTTGTAACTCCACC CTGTCCTTTTGTTTTTGGTGTGCAACCGCCGCCATTTTGTTGTCTCTTCG CTCTCGTATTCGTTCGTGTAATGCATCTGTCTACGTATGCGTGCGTGGGT GGGTGGGGTGCCCTTGCCGTGGGTGTGGGTGTGGGGGCGCAGGTTCGCTT TTTGTGGTCGGACGTCGGCGTGTCCGAGGAGGACCTGCCGAGGGTGCTCC AGACCTTTCCTCTGCTGTTCGCGCTGCCGCTCTCGCGGATGCAAGATGTC ATGGCCTTTTTGACGGAGGACCTGGCCATCAACAGGAAAGACACCGCCAA GATTATCAGGTATTTACTGTATGAGCCGTGCTCGCGATAAAACATCACAG GGAGGCACCGCAGGAGGGGATCCACCGGTCCACCCCCCCCCCCTCCTGTG TGACCCCAGCTGGGTCGTCTAGGTAGTCGTGGTAGAGGATGGGGGCCATT GGGGCAGACGACGAAAAAGTCAATAATGGGAGGAGAAAAAAAAATGTAGG AGTATTATATATTTATACTCGTATACATACATAGAGAGTATATGGATGTG TAGTTCATGGTACGGCACGGCAGAGAGGACAGTTTTTGGCGGCCAATCGA CCGATCGATGGCTTCGTCCGCTCGTTCCTGCTTCTTTCGTCGACCCGCGA ACGCGCCTGCCTGGCCATCGACGTTAACAACGGCTCCTGGTGACTGACTG CCGTCGGCCAAGACGATGATGGTGATGGTGATGGCGATGATAGTGCCCAT CCCGTCGTCGCTACTGCGTCGCCCCCACTACTTTTCCACCTCACTTTGTC GAGTGGCTGAATAGCTAGCGGTCTTGTCCTGCTGCGTCGTCGTCGTCGTC GGTCGTTGCCGCTGCTGCCGACTGCCGCTGACTACCATTGCACCGCTTTG TATCGCGGCCTATGCACACATAGGCTCTGTCGTGTTCACCATCGACCATG GCCCGCCGTTCCACCGTTATGTAGTCGAGACCGTCACGCCGCTAAATATC ATGGCCAGACTGCCGTACCGTACCACCATCAGGATGGTGTCGCCGCTACG TGAGCTATCGTGTTGGCATTGCCATTTTTTGCCACTAATTGGCACACACA CCACCACCACCACCCTGAACACCGTCAGGATCATCTCGCCGCTACGTGAG CTGTCTCTGGCATTGCCTTTTTTACCACTAATTGACGCGCACACCATCAC CACCACCACCACCACCACCCTTAACACCATCAGGATTATCTCGCCGCTAA ATTACATACGTGAGCTGCCGTTGGCATTGCCTTTTTACCACTAAATTATG GACGCATACGCCTACCACTCCTCGGCCGCTTTTTGCCAGGGCGTTCCCTT CGCTACTCGGGCTCGAGAGGGAGCGGCACATGAACGGGGTTGTCCTCTAC CTGAAGAAGCTAGGGGTGCAGAACATTGGCCGCTTCGTGTCGCGCCTCCC GCCCGTGTTGGGGTACGACGTCAAGACCAACCTCACCCCGAAGGTGTGAA GAGCCCGAGCCGGCCCTCGGCGCCGTGTGTGTTTACCCCGCCGGCTACAT ATTTACAGTCTGAGCGCTTGGGGAAAGGAACCCTTCTGTGTGACCACGGT TCAGTACTCTGGCAAGATGTCCTCGGGACAGGGAGGGAGGGGAGCCCATC GAGCACTGGAAATAAATGTGAAGAAGACAATAAATAAAAATAAAAAAAAA CGCTGCTGCCGGCGGAGAATTCTGGCGTCTCGTGTGTCTTGTGTGTAGTG CTCGCTCGATCCGGTGGTCCATCCATAGGTGGCCGGGTTCCCCTGCTTGC CTTGCGCGCGATTATTTTGGCAGTGGCGCTGCTGCGGGCGGGGGGGCGTA GTTAGTTACGAGGGGGCATGGCGTGTTGCACTGCGGCGGTGTGTTTAATT TTATTTTTGTGCAGAAGTGTTCGTTCGTGCTCGACTTGGTTGTCGGGGTT TTATTGAAGTGACTCTCTCTCCGTCGGCCGTGCCTGCCGTGGGCCTGCGT AAAGCCAGATTCGATACCACGGTGCCCCCTAGGTCGATCATATTATTGCT TTAGGCTTGACTCCTTTCGCTGCAGCGCGCGCGGGGGGGGGGGGGGGGGG CGCGTTGGGGCGGCACAGAGGAAGCGTGAGGAATCGCCTCCACCCTGTGT GGGGCGCACATCCTTCCTTGGGTNNNNNNNNNNCCTGGCGCCCCGATAGC TGCTGCCTCGCGGCCGGTGCTGCAGGTTTTGTTCCCGCGTTTTCCTCTCC GTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGCC GTCGGGCTGCCCCAGACGAAGCGTGAGCAATCTCCTCGAGCCTTAGTGAC TGACTGATCTTCCCTTGGGCGTGTCGTTTGATATTCGGGTAGTACTCCTG CTCCTTCTGGCGTGGGTGTGGAGCAACTGAGCTTTGAAATCGGCAACGCC GTGCGTGACATCTTCGCAATCGACCGGGCCCCCACGGTAGAGCTAAAACA TCTTGCCCATTTTTACGTGCGTGGGGCTTCGTGTGCGCTCTTGCCTTTGA CCCCTGTGCACACTGCCCCCCCGTGCACCCACCAGCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCTCCTCCTACTCCCCCGCCCTCCCCACCAGCNNNN NNNNNNCTCGCCCCTTTTTCAGGGCGGGGGGCCTCCTGTGCGCCCCCTCC TTTCCCCCCCGGCCGCCCGCCCCCCCTCTTCCCCCCCCCCCCCCCCCCCC CCCCCCTCCACTCTCTCCTCTTTTTGTCACCACCATCATCACAGATGGAC TATCTCGTGGAAAAAATGGGTCTGAGCGTGTATGACGTGCTCACATTCCC AGCGTACTTCTCGTACCCCCTGGATACCGTCATCGAGCCGAGAACAGAAT TTCTCAACATCAGGTGAGGGAAAAAGCACAGCCACTACATCATCCGTCTT GGGGTTTGGGACTTGTACACTGGAACTCGTGGGGATCTCGACAGCATACG GTGGAAGTGTATATTTTTTTCCTGTTTTTTTCCTGGGCAGGGACTGCTGT GCAAGGGGAGTAGTCAGTCTCCACTGCAAATTATGTTACATTCTAAATTC CTGCGGATGTGCTCTACTCCCTCGGATGCTCTCGCGGTCTCGTGGGGTGT GATTGATGTCTCTCTCTCTCTTATTTGTGTCCAACAAATCCAAGGGGGCG GCCGATCACGCTGGTTGGTGTCAACATCGCATTGCAGCAAGGAGACGCGG ACTTCGCGCGCAAGGTGGCCAAGGTCCAGCCTCGGGTGTACCGAGAGTTC AAAGAGACCTACATGGACAATAGGTGGGCGATTCGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6967:631..7116+

>mRNA_L-elsbetiae_contig6967.15741.1 ID=mRNA_L-elsbetiae_contig6967.15741.1|Name=mRNA_L-elsbetiae_contig6967.15741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2028bp|location=Sequence derived from alignment at L-elsbetiae_contig6967:631..7116+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCTGCTGCAGCGGCTCGGCATGCGGCCGACGGATGTGCGTCGTGT
CATCAGGAAGGCGCCGGAGGTGTTGGCCCCGCGTGCCGACGGGAGCACGG
CGGCGGAAGCGGTGGACATGGAGCTGCTGCAGCGGCTCGGCATGCGGCCG
ACGGATGTGCGTCGTGTCATCAGGAAGGCGCCGGAGGTGTTGGCCCCGCG
TGCCGACGGGAGCACGGCGGCGGAAGCGGTGGACGTTCTCTATGCGCTTG
GGTTCCGAAGGCGGCATTTGAGGATGGAGGCGCAGCGATGGCCGCAGCTG
CTTGCGGTGCCACCCGGGAGTTTTTTCCAGCTGGCCGCTTTTCTCGCTTC
CGAAGAGGTTCTCTATGCGCTTGGGTTCCGAAGGCGGCATTTGAGGATGG
AGGCGCAGCGATGGCCGCAGCTGCTTGCGGTGCCACCCGGGAGTTTTTTC
CAGCTGGCCGCTTTTCTCGCTTCCGAAGAGGTGGGCATCAAGGCTACGAA
CACCGCTTCTCTCATCCGGCAGGCCCCGTGGCTGGTGCTGCAGCCGATCG
ACGGGCAGATGCTGCCGGTCGCCAGGTTTCTGCGGATCGCGGGCGTGACG
GACGTGGAGAGGGTGGTGAGGGCGTACCCCAAGGTGCTCTGCGCGAGCAT
TAAGGGCGAACTGGCTCCGCGGGTGGGCATCAAGGCTACGAACACCGCTT
CTCTCATCCGGCAGGCCCCGTGGCTGGTGCTGCAGCCGATCGACGGGCAG
ATGCTGCCGGTCGCCAGGTTTCTGCGGATCGCGGGCGTGACGGACGTGGA
GAGGGTGGTGAGGGCGTACCCCAAGGTGCTCTGCGCGAGCATTAAGGGCG
AACTGGCTCCGCGGGTTCGCTTTTTGTGGTCGGACGTCGGCGTGTCCGAG
GAGGACCTGCCGAGGGTGCTCCAGACCTTTCCTCTGCTGTTCGCGCTGCC
GCTCTCGCGGATGCAAGATGTCATGGCCTTTTTGACGGAGGACCTGGCCA
TCAACAGGAAAGACACCGCCAAGATTATCAGGTTCGCTTTTTGTGGTCGG
ACGTCGGCGTGTCCGAGGAGGACCTGCCGAGGGTGCTCCAGACCTTTCCT
CTGCTGTTCGCGCTGCCGCTCTCGCGGATGCAAGATGTCATGGCCTTTTT
GACGGAGGACCTGGCCATCAACAGGAAAGACACCGCCAAGATTATCAGGG
CGTTCCCTTCGCTACTCGGGCTCGAGAGGGAGCGGCACATGAACGGGGTT
GTCCTCTACCTGAAGAAGCTAGGGGTGCAGAACATTGGCCGCTTCGTGTC
GCGCCTCCCGCCCGTGTTGGGGTACGACGTCAAGACCAACCTCACCCCGA
AGGGCGTTCCCTTCGCTACTCGGGCTCGAGAGGGAGCGGCACATGAACGG
GGTTGTCCTCTACCTGAAGAAGCTAGGGGTGCAGAACATTGGCCGCTTCG
TGTCGCGCCTCCCGCCCGTGTTGGGGTACGACGTCAAGACCAACCTCACC
CCGAAGATGGACTATCTCGTGGAAAAAATGGGTCTGAGCGTGTATGACGT
GCTCACATTCCCAGCGTACTTCTCGTACCCCCTGGATACCGTCATCGAGC
CGAGAACAGAATTTCTCAACATCAGATGGACTATCTCGTGGAAAAAATGG
GTCTGAGCGTGTATGACGTGCTCACATTCCCAGCGTACTTCTCGTACCCC
CTGGATACCGTCATCGAGCCGAGAACAGAATTTCTCAACATCAGGGGGCG
GCCGATCACGCTGGTTGGTGTCAACATCGCATTGCAGCAAGGAGACGCGG
ACTTCGCGCGCAAGGTGGCCAAGGTCCAGCCTCGGGTGTACCGAGAGTTC
AAAGAGACCTACATGGACAATAGGTGGGCGATTCGTGGGGCGGCCGATCA
CGCTGGTTGGTGTCAACATCGCATTGCAGCAAGGAGACGCGGACTTCGCG
CGCAAGGTGGCCAAGGTCCAGCCTCGGGTGTACCGAGAGTTCAAAGAGAC
CTACATGGACAATAGGTGGGCGATTCGT
back to top