mRNA_L-elsbetiae_contig6956.15729.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6956.15729.1
Unique NamemRNA_L-elsbetiae_contig6956.15729.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.020e-122
Identity = 204/270 (75.56%), Postives = 226/270 (83.70%), Query Frame = 2 
Query:  434 MSSNGT-SRGGSSAVPGVGGRGGPQQVARVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLEGMDGTK-GAGGARVHSSXXXXXXXRGGSAEGPR 1237
            MSSNG  SRGGSSAVP     GG  Q  +VI S +WD+R+KRCEVAKG+LNELVMNYLVVEGYRDAAEHFVEESGT+AKVDL TIEERVAIRKAMMQG+VV+A +LANDLDPTMLDRDRELRFGLLKQRLLELV++GD D AL FA E LAPEGA+DPA+LR+IEEAV+LLA+ED ++ PLS LL MEQR A+AGRLNAAVLQSQQQE GPWLPDLLRQLVY+QNALSE VEFPR+EG+ GTK G GG R             GSAEGPR
Sbjct:    1 MSSNGAGSRGGSSAVPS----GGMLQQ-KVIDSPSWDVRMKRCEVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQQQETGPWLPDLLRQLVYTQNALSERVEFPRIEGIGGTKEGVGGTRSTGD---------GSAEGPR 256
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A1Y1Y6B0_9FUNG (Uncharacterized protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6B0_9FUNG)

HSP 1 Score: 202 bits (514), Expect = 1.600e-59
Identity = 103/208 (49.52%), Postives = 145/208 (69.71%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRL 1138
            + I+   W  RL + +V K DLN+LVMNYLV+EGY+DAAE F +E G    +DL +IE+R+ IR A+  GD+ +A E  NDLDP +LD + +L F L +QRL+EL++KG+ D AL+FA E LAP G  +P ML+E+E+ ++LLA+ED +  P+ +LL    RQ +A  LNAA+L SQ Q+K P LP LL+ LV++QN L E   +PR+
Sbjct:    8 QAISKEEWSERLDKVQVNKHDLNKLVMNYLVIEGYKDAAEKFSQECGLSPNIDLTSIEDRMNIRNAVHSGDIGEAVERVNDLDPEILDTNPKLFFHLQQQRLIELIRKGNVDEALEFAQEELAPRGEENPEMLQELEQTMALLAFEDLNKSPVGELLDHTHRQKTASELNAAILTSQSQDKDPKLPGLLKMLVWAQNQLDEKTNYPRI 215
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: D8QSL2_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QSL2_SELML)

HSP 1 Score: 201 bits (510), Expect = 7.190e-59
Identity = 102/208 (49.04%), Postives = 143/208 (68.75%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRL 1138
            ++++   W+ +L   ++ K D+N+LVMN+LV EGY DAAE F  ESGT  +VDL +I +R+A+RKA+  G+V  A E  NDL+P +LD + +L F L +QRL+EL++ G  + AL+FA E LAP G  + + L E+E  V+LLA+ED S CP+ DLL   QRQ +A  LNAA+L SQ  EK P LP LL+ L++SQN L E V +PR+
Sbjct:   10 KIVSREEWERKLAEVKIRKEDMNKLVMNFLVTEGYVDAAEKFQHESGTSPEVDLGSITDRMAVRKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKLEEALEFAQEELAPRGEENHSFLEELERTVALLAFEDTSNCPVGDLLDFSQRQKTASELNAAILTSQSHEKDPKLPSLLKMLIWSQNQLDEKVSYPRI 217
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A058ZTY9_EUCGR (Uncharacterized protein n=9 Tax=Myrtoideae TaxID=1699513 RepID=A0A058ZTY9_EUCGR)

HSP 1 Score: 200 bits (508), Expect = 1.890e-58
Identity = 104/215 (48.37%), Postives = 147/215 (68.37%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLEGMDGTK 1159
            +VIT   W+ RL   ++ K D+N+LVMN+LV EG+ DAAE F +ESGTE  +DL+TI +R+A++KA+  G+V  A E  NDL+P +LD + +L F L +QRL+EL++ G  + AL+FA E LAP G  + + L E+E  V+LLA+ED S CP+ DLL M QR  +A  +NAA+L SQ  EK P LP LL+ LV++QN L E   +PR++ +   K
Sbjct:   18 KVITKEDWEKRLNDVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLSTITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGDLLDMSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLVWAQNQLDEKAIYPRIKDLSTAK 232
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A167JPN0_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167JPN0_PHYB8)

HSP 1 Score: 198 bits (504), Expect = 6.800e-58
Identity = 103/214 (48.13%), Postives = 143/214 (66.82%), Query Frame = 2 
Query:  500 PQQVARVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLE 1141
            P    R ++ + W+ RL + +V K DLN+LVMNYLV+EGY+DAAE F  ESG    VDL +I+ER+ IR A+  GDV  A +L NDL+P +LD + +L F L +QRL+EL++KGD   AL+FA E +AP G   P  L E+E  ++L A++D +  P+ DLL    RQ +A  LN A+L SQ +EK P LP+LL+ LV+SQ  L E + +PR+E
Sbjct:    3 PTATKRFVSRSEWEQRLSKVKVNKQDLNQLVMNYLVIEGYKDAAEQFSAESGLSPAVDLESIQERMEIRHAIQSGDVDTAIDLVNDLNPEILDTNPQLFFRLQQQRLIELIRKGDFGAALEFAAEEMAPRGEEHPEFLEELERTMALFAFQDINTSPVKDLLHSGHRQKTASELNTAILDSQSREKEPKLPNLLKMLVWSQVQLDERLLYPRIE 216
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A8J5LFS9_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LFS9_ZINOF)

HSP 1 Score: 197 bits (501), Expect = 2.360e-57
Identity = 100/216 (46.30%), Postives = 144/216 (66.67%), Query Frame = 2 
Query:  500 PQQVARVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLEGM 1147
            P    +VIT   W+ +LK  ++ K D+N+LVMN+LV EGY +AAE F  ESGTE  +DL TI +R+A+++A+  G+V  A E  NDL+PT+LD + +L F L +QRL+EL++ G  + AL+FA E LAP G  + + L E+E+ VSLL +ED   CP  DLL + QR  +A  LNAA+L SQ  EK P LP +L+ L+++QN L E   +P++  +
Sbjct:   18 PLMSKKVITREEWERKLKEVKIRKEDMNKLVMNFLVTEGYVEAAEKFRIESGTEPDIDLGTITDRMAVKQALQSGNVEDAIEKVNDLNPTILDTNPQLYFHLQQQRLIELIRSGKIEEALEFAQEELAPRGEENQSFLEELEKTVSLLVFEDAKNCPYGDLLDVSQRLKTASELNAAILTSQSHEKDPKLPSMLKMLIWAQNQLDEKAVYPKINNL 233
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A1Y1HP05_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP05_KLENI)

HSP 1 Score: 196 bits (499), Expect = 3.040e-57
Identity = 103/208 (49.52%), Postives = 142/208 (68.27%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRL 1138
            +VI    W+ RL   ++ K D+N+LVMNYLV EGY DAAE F  ESG + ++DL+TI +R+ +RKA+  G+V  A E  NDL+P +LD + +L F L +QRL+EL++ G  + AL+FA E LAP G  +   L E+E  V+LLA+ED +  P+SDLL + QRQ +A  LNAA+L SQ  EK P LP LL+ LV++QN L E V +PR+
Sbjct:   10 KVIGREDWEKRLSDVKIRKEDMNKLVMNYLVTEGYVDAAEKFQLESGVKPEIDLSTITDRMTVRKAVQSGNVEDALEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKVEEALEFAQEELAPRGEENHQFLEELERTVALLAFEDTANSPVSDLLDISQRQKTASELNAAILTSQSHEKDPRLPSLLKMLVWAQNQLDEKVSYPRI 217
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BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A1D1ZA71_9ARAE (UPF0559 protein n=4 Tax=Araceae TaxID=4454 RepID=A0A1D1ZA71_9ARAE)

HSP 1 Score: 196 bits (499), Expect = 4.690e-57
Identity = 101/215 (46.98%), Postives = 144/215 (66.98%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLEGMDGTK 1159
            +VIT   W+ +L   ++ K D+N+LVMN+LV EGY + AE F  ESGTE  +DL TI +R+A++KA+  G+V  A E  NDL+P +LD + EL F L +QR++EL++ G  + AL+FA E LAP G  + + L E+E+ V+LLA+ED S CP+ DLL M QR  +A  +NAA+L SQ  EK P LP LL+ L+++QN L E   +PR+  +   K
Sbjct:   23 KVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVEVAEKFRLESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRMIELIRNGKLEEALEFAQEELAPRGEENQSFLEELEKTVALLAFEDVSNCPVGDLLDMSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAVYPRINDLSSAK 237
[Close]
BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A804L5V2_MUSAM ((wild Malaysian banana) hypothetical protein n=7 Tax=Zingiberales TaxID=4618 RepID=A0A804L5V2_MUSAM)

HSP 1 Score: 196 bits (497), Expect = 5.340e-57
Identity = 101/208 (48.56%), Postives = 142/208 (68.27%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRL 1138
            +VIT   W+ +LK  +++K D+N+LVMN+LV EGY DAAE F  ESGTE  +DL TI +R+A++KA+  G+V  A E  NDL+PT+LD + +L F L +QRL+EL++ G+ + AL+FA E LAP G  +   L E+E  V+LLA++D   CP  +LL + QR  +A  LNAA+L SQ  EK P LP LL+ L+ +QN L E   +PR+
Sbjct:    4 KVITREEWERKLKDVKISKKDMNKLVMNFLVTEGYVDAAEKFRIESGTEPDIDLATITDRMAVKKALQSGNVEDAIEKVNDLNPTILDTNPQLYFHLQQQRLIELIRTGNVEEALEFAQEELAPRGEENQNFLEELERTVALLAFDDVKNCPYGELLDVSQRLKTASELNAAILTSQSHEKDPKLPTLLKMLILAQNQLDEKAVYPRI 211
[Close]
BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Match: A0A0D6QUP9_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QUP9_ARACU)

HSP 1 Score: 196 bits (499), Expect = 5.800e-57
Identity = 100/208 (48.08%), Postives = 143/208 (68.75%), Query Frame = 2 
Query:  515 RVITSAAWDLRLKRCEVAKGDLNELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVVQATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLAPEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAVLQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRL 1138
            +VIT   W+ +L   ++ K D+N+LVMN+LV EGY +AAE F  ESGTE ++DL TI +R+A+R+A+  G+V  A E  NDL+P +LD + +L F L +QRL+EL++ G  + AL+FA E LAP G  + A L E+E  V+LLA+ED S CPL++LL + QR  +A  +NAA+L SQ  EK P LP LL+ L+++QN L E   +P +
Sbjct:   30 KVITKVDWEKKLNDVKIRKEDMNKLVMNFLVTEGYVEAAERFRMESGTEPEIDLATITDRMAVRRAVQSGNVQDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRSGKLEEALEFAQEELAPRGEENQAFLEELERTVALLAFEDTSNCPLAELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKARYPHI 237
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6956.15729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7B9_9PHAE1.020e-12275.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1Y6B0_9FUNG1.600e-5949.52Uncharacterized protein n=2 Tax=Basidiobolus meris... [more]
D8QSL2_SELML7.190e-5949.04Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A058ZTY9_EUCGR1.890e-5848.37Uncharacterized protein n=9 Tax=Myrtoideae TaxID=1... [more]
A0A167JPN0_PHYB86.800e-5848.13Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
A0A8J5LFS9_ZINOF2.360e-5746.30Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A1Y1HP05_KLENI3.040e-5749.52Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1D1ZA71_9ARAE4.690e-5746.98UPF0559 protein n=4 Tax=Araceae TaxID=4454 RepID=A... [more]
A0A804L5V2_MUSAM5.340e-5748.56(wild Malaysian banana) hypothetical protein n=7 T... [more]
A0A0D6QUP9_ARACU5.800e-5748.08Uncharacterized protein n=1 Tax=Araucaria cunningh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6956contigL-elsbetiae_contig6956:4566..10115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue6.9e-94
Seed eggNOG ortholog2880.D7G2A7
Preferred nameGID8
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045
EggNOG free text desc.negative regulation of gluconeogenesis
EggNOG OGsKOG2659@1,KOG2659@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionLisH dimerisation motif, subgroup
Ec32 orthologEc-16_001850.1
Exons6
Model size1240
Cds size807
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.9195662-CDS-L-elsbetiae_contig6956:4565..47031622816770.9195662-CDS-L-elsbetiae_contig6956:4565..4703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 4566..4703 -
1691683800.6724222-CDS-L-elsbetiae_contig6956:4565..47031691683800.6724222-CDS-L-elsbetiae_contig6956:4565..4703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 4566..4703 -
1622816770.9324243-CDS-L-elsbetiae_contig6956:5406..55561622816770.9324243-CDS-L-elsbetiae_contig6956:5406..5556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 5407..5556 -
1691683800.6818204-CDS-L-elsbetiae_contig6956:5406..55561691683800.6818204-CDS-L-elsbetiae_contig6956:5406..5556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 5407..5556 -
1622816770.9420826-CDS-L-elsbetiae_contig6956:6339..65051622816770.9420826-CDS-L-elsbetiae_contig6956:6339..6505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 6340..6505 -
1691683800.69377-CDS-L-elsbetiae_contig6956:6339..65051691683800.69377-CDS-L-elsbetiae_contig6956:6339..6505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 6340..6505 -
1622816770.9527504-CDS-L-elsbetiae_contig6956:7105..71821622816770.9527504-CDS-L-elsbetiae_contig6956:7105..7182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 7106..7182 -
1691683800.7094626-CDS-L-elsbetiae_contig6956:7105..71821691683800.7094626-CDS-L-elsbetiae_contig6956:7105..7182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 7106..7182 -
1622816770.9642425-CDS-L-elsbetiae_contig6956:8439..85621622816770.9642425-CDS-L-elsbetiae_contig6956:8439..8562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 8440..8562 -
1691683800.7213793-CDS-L-elsbetiae_contig6956:8439..85621691683800.7213793-CDS-L-elsbetiae_contig6956:8439..8562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 8440..8562 -
1622816770.9747612-CDS-L-elsbetiae_contig6956:9529..96821622816770.9747612-CDS-L-elsbetiae_contig6956:9529..9682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 9530..9682 -
1691683800.7301521-CDS-L-elsbetiae_contig6956:9529..96821691683800.7301521-CDS-L-elsbetiae_contig6956:9529..9682Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 9530..9682 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.9909253-UTR-L-elsbetiae_contig6956:9682..101151622816770.9909253-UTR-L-elsbetiae_contig6956:9682..10115Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 9683..10115 -
1691683800.7392392-UTR-L-elsbetiae_contig6956:9682..101151691683800.7392392-UTR-L-elsbetiae_contig6956:9682..10115Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 9683..10115 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6956.15729.1prot_L-elsbetiae_contig6956.15729.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6956 4566..9682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6956.15729.1

>prot_L-elsbetiae_contig6956.15729.1 ID=prot_L-elsbetiae_contig6956.15729.1|Name=mRNA_L-elsbetiae_contig6956.15729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MSSNGTSRGGSSAVPGVGGRGGPQQVARVITSAAWDLRLKRCEVAKGDLN
ELVMNYLVVEGYRDAAEHFVEESGTEAKVDLNTIEERVAIRKAMMQGDVV
QATELANDLDPTMLDRDRELRFGLLKQRLLELVKKGDEDGALKFAVERLA
PEGARDPAMLREIEEAVSLLAYEDPSACPLSDLLGMEQRQASAGRLNAAV
LQSQQQEKGPWLPDLLRQLVYSQNALSESVEFPRLEGMDGTKGAGGARVH
SSSGGGGGGRGGSAEGPR*
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mRNA from alignment at L-elsbetiae_contig6956:4566..10115-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6956.15729.1 ID=mRNA_L-elsbetiae_contig6956.15729.1|Name=mRNA_L-elsbetiae_contig6956.15729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5550bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:4566..10115- (Laminarionema elsbetiae ELsaHSoW15)
TTGATCATCCTCGGTTTCCGTCTCGAGCACTCCTACGCAGCGCTGGCGAG
ACCTTGCGGCCCATAGGCTCACCTTCTTCTCCGGGAGCACAGCCGTCGCC
ATCGTCTGTTTTTTTTGTGAGAGCCGCGATCTCGTGGGGGGGGGGCACAG
CCGTTTGTGTCCCCCCACCGGTTCTCGCGCTGTGCCCCCCGCAGTTTTTT
TTGTGTTTTTTCGCGGGCCAAGTTCCTCTCACTTCCCACACCGTTGGTGC
AGGACGGTACAGAGACAATAGACTTTCTCTATCCATCCCTCTCCCGATCG
CCACGCGTGGTTTTCTTTTAGGCGGTATCAGGTGAACCACTGTCGCATTG
CAACTATCAAACCACCAATCTGCGGTGCGGCGAAACTACCGTCCGTTGTC
TATGCAGCTTAGTCTACCTTCGTACTCCTAACAATGAGCTCGAACGGGAC
ATCTAGGGGCGGCTCCTCCGCAGTACCGGGAGTTGGCGGGCGCGGGGGTC
CACAGCAGGTGGCGAGGGTCATCACGTCAGCGGCGTGGGACCTACGCCTG
AAGCGATGCGAGGTAGCCAAGGGAGACCTGAACGAGGTAATGAGCAACTT
TTCTGTTTATTTATGTAGGTACTTCGAACATACAACGGTATGGGATTTCA
TTGTTTCTCTCCTTGCGGCGAACTCTGCATACATGAACTGGAATCCCCGA
GAGAAGGTGGCGGGTGGAGAGTTCACAACACGCCAGTGAATTTTTCAGTA
TAAGCAGGGTGCACTTCAGTTTCGGGATGCTTCAGTGGCCTGGAAACTAT
CCGTGGTGACCATTTCTGCGGTCAAGTTGAACTCGGCGTGAATGACAACA
ACAACTTTGGCAGCAGCCCGGTTCACCGCCGGCTAGACTACATGTAGCAG
TAGGAGCCCATCACTGCCATGCCAGTGCTGGGTATCTTTGGAGCACCCAC
GTCCTCTCTGCGTTTGCAGGTGCTGCTGCTGCCTGCCGTAGTGTTTTCAG
CTTTCAAGCGACGATTTGAAGATGCAAGAAGTGTGCACGTTTGTGTGCGC
GTGTGTGCGTGCATGTTGTGCTCGCCCCGGTAGCGGTGAACGTATACACG
CTGGCACTGCTGCCGCTGCTGCTTGCTGCTGCTGTTGCTGCCTGCATTGC
GACCAACCGAAAACGCGCCAAATGCATTCGTGTATTTGGCTGTCGTTATC
AGAGAAGCAAGTGGCGTTGTTGGTGTTTTTGCCTCCTCACCCCTAGCTGT
TCCCTCCCCGTGTTTCATTTTTCTCGTCCGTCCATCTCTGGACATACACA
CATACACACCGCAGGAGGAGGGGGTCCACGCCCCCCCTCCTGTGTGACCC
CGGTTGGGTCGTCTAGCTAGTCGTGGATGGGGGCCAGTGGGGCAGACGAC
AAACATGCCAATGATGGGCGGAAAAATAAAATACAACATACATACCCCCT
TGACTCTCTTCCCCGCCGGCCGTATATCTGTTGTTTGTGCTGGGCGTGCT
TTTGGCAAAAAACGGATAAAAACAAAATCCTCCTGTTTTATGTCCGAAAA
AAGCTGGTGATGAACTATCTGGTCGTAGAGGGCTACCGGGACGCGGCGGA
GCACTTCGTCGAGGAGTCCGGGACGGAGGCGAAGGTGGACTTGAATACGA
TCGAGGAGAGAGTTGCGATAAGGAAGGTGAGAAGTGGGATATATATTTTT
TAGGGGGTGTCAATTGTGCGATACTGCTGTACGTCCTGAGGGGAGGACCG
CTGCGATAAGGAAGGTGAGAAGTGGAAAGTGGGATCGGAGTATTAATTGT
GCGATAGATACTACATGCGTTCGAAGGGAAGGACCAGTGCCAGCAAGTTA
AGAGTGTTCGGTAACGTCAGCGTAGAACGCTGACGGGGTCGGAGTAAAGC
ACTGGTGGTTACGTGCCGTACGAGGTGGTGTATGTATGTCGTTGGACACA
CGTGAAGTGAAGTAGCAGAAACTTGCGGCGACAGCATCCTTTTTAGATGT
TTGTGAGCCGCCTAAGCGGTGTCGTCGTTCGACCGGCGAACCGAGACAAA
AACGGTCCGCCGCAGGTGCGCACGCGCCCCGATGACGAGGCGATCCAGCG
CATCGTGGCGGCGGGGGCTGTTACACTCTACGACGGCCTCTGCTCGCCTC
CGCATTCCGTGCACTCCACCAACCTCCGCGCTGCGCCAGCAGAAGTCGCT
GCGCCAGCAGACGTCACAGCGTTGAGAAGCAAAGCGTGCAAACGTAAAGC
GTCTTGCCGGGCACTCGCGGAAGCGCGCAATTTATAGCTTTCCCGCCTCC
TGCGTCGCGTGCAGTCCTTGCGAACGTAACACATATCGTATTTCTTCGTA
TGTTTGTACGTACCGTATATTACTATGACGCAAGATACCACTCCCCCTGG
ACAGATTTTCAAAGCTCAGTTCCTCCCCAGCACAAAGAGTGTCAATGCTG
AGGGGGGGTGGCGTTCGTTGGAAATATCAAGTCGAGGGCTGTTCGAAAAT
GTGTCGTTTGGTGCTTGCACCCTCTTCGTTAGGGAGTAATGGAACTCTAA
AACTCGGCCCAGGGGAGGGTGGTATCTTGTGTCACCTACGGTATGTAGGA
CAGGTCATGATCTTGTCCGTCTGTGGCCCCGCAGATCACGTGACACCCAC
CGGCGTGCGCTGCGCTGATTGATCTGTGGGCCGTAACAGGTCGGCCGCCG
GTGACCTTGCGTCGACTGCATACATACCTGCGGCCACAGATCAAGCTGGT
CTAGAATAGAACCACCCACTACTGCCGCAGGAAGGACCAACATATGATTG
ACCCACAACAGGGTGACCGGACCTCCTGCCCTACACTTGTGCGAGCGTTA
ACGTTTCCGGCTGAGATTCTTCCCCGCTGAACCACCGACCTCTCCCCCGG
TGCCGCGCCTCGACGGACGTTGTCGATCGGCAGGCGATGATGCAAGGGGA
CGTGGTGCAGGCCACGGAGCTGGCGAACGACCTGGACCCCACCATGCTCG
ACAGGGATAGGTGCGCCCTTGCCACATTACATCACATCACATCATGTCAT
GCTCATACCATCATGGCCATATCATCGATCATGATCCCACCATGCTCTAC
AGGGATAGATTCGCCCCTGTTGTATCTCCACCACATAACACCATGATCGT
GATCATTATCATGAGCATATCATATCGCTGGTGTCGGCGGAAGGCGAACT
CTCTCTCTCTCTCTCTCTCACACACACACACACACACACGCGGGGCCCCT
TTCCCATTTCATTTGACGTACCGTTCGGAAAAGCTGATTTTCCTGGCATC
GTCAGCAGGTCAAACACGGAGGGCCATTCCAGCATATCGTCGCTGCGACC
AGCGCGCTTTCCGCCAGCCCCAAAATTATTTTGTGTTATACACCGTACCA
GTCGGCGTTCTGTGGTGTGTACCCCCTTTTTTAGTCTATCTTCCCTCGCG
GGAGACAAAGAGGGGGGGGGGGGGAAGGAGAGCTTGGCGTCGCCGAGGCG
CTGAATGGCGCAATAAAAGATGTTGGACGTGCTGTGCTGGCAATGCCCTC
CTTCTTCTTCTTCTTAATTTGCCCGGTTTTCTTTGCTTGTGCTTGCTTGT
CCCTCACAAGAGAGCTTCGATTCGGGCTGCTGAAGCAGCGGCTGCTGGAG
CTGGTGAAGAAAGGCGACGAGGACGGGGCCCTCAAGTTCGCGGTGGAACG
CCTCGCCCCCGAGGGCGCGAGAGACCCGGCGATGCTGAGGGAGATCGAGG
AGGCGGTATCGTTGCTGGCGTACGAGGTAAATATCCGCGAATCATGTATG
CCTGTACTACAAACACATGTTGCGCTACGTGCTTACTGGTTGTCGTGCTC
GTGGTATATCGATCTTGGTCGCGATGCTGCAGAACACCTGATGCCTTGAA
CTACACGGTGGTAGCCATGGCTGTGGTGGTGGCGGTTGCCATGGTGGTGT
GGTGGTGGTGGTGGTAAGTTGCTTTGTAAGCAAGGCTTGTCGTTTTTGGT
TGCTTTTGGTTATGTGGGAGTTTGATCGTGCGTGCGCGCACGCAGCAGCA
GCAGCAGCAGCTTTCGGTGGCGGTATTGGTGCTCTCAAGACTTGGCCGTG
CCCCCGCTCTCCCCGCAAATCTTCGGGCGGACAAACAAGCAAGAGCACGT
AGCGTGTATGTAGCACAGCACTCGGGTGTTTCGCTGCGGGTATTGTGAAA
AAAGTTTGGAACCCGCGTAAATATCGATCGGACGGTCGAGCGAAACAACA
GAGCAAGGTCGCAAGTCACGGGTGGCATCTTAACAGGATGCTGCTGCCTG
CACCTTTTTCCCCAGCCTTAGGCCGCCGCCCTCCGCGCGCCTTGGTCGGC
CTTCGGTACTTACTGCGCGTGCGGGTGTGCGGGGGCCTTCCCACGCTCGC
CTCGGGGACGACCGCTCTAAGAACCGCAGCGAGAAATGACAGATCGATCG
ACTCTCCCAGGCCTTTGACCCTCCGCCCCCCCACGGCGCGCGCTTTTCGC
CCTTGCCCGCTCGCTGGCTTGGATCTGCCTGCGCTACTGTTTGTCCCGCG
CCCCCTCAGGACCCGTCCGCGTGCCCCCTGTCCGACCTGCTGGGCATGGA
GCAGCGGCAGGCCTCGGCCGGCCGGCTGAACGCGGCGGTGCTGCAGAGCC
AGCAGCAGGAGAAGGGGCCGTGGTTGCCCGACCTCCTCCGGCAGCTCGTC
TACTCTCAGGTGTGTATGTATGTATGTATGTATGTATGTAGTACCGGGCG
AAGCAGGCACGTACAAGCATGGAATGTAGACTCCTGTACTGGCTATCTAC
TTTATGTAGGTGAAATGCACGGCAGAGGAACGACCCGCCCCGTTGTGTGG
AGGGAAAAAACAGACCAACCACCGCCGTGCAAGGCGCATCATCGCCCCCT
TTCATAGACCAACCACCGTGCAAGAAAACGTGTGGAGGGAAAAGCAGACC
AACCACCGTGCAAGGCGCATCGCCCTTTCCATGCAAGATAACGCGCGTGG
AGGGAAAAACAGACCAACCACCGGGCAAGGCGCATCGCCCTTTTCATGCC
AAGAAAACGCGTGTGGAGGGAAAAACAGACCAACCACCGTCCCGTGCAAA
GCTTATCGCATTTTTCATGCCAAGAAAATGTTCCGATTTACACCGGTAGT
GTAGTATTTACGGTACATATTTGTATGTACATATACTCGCAGAAAGTGGT
CTTGGTGAGGCGATGTGCGGTATTAACGGAGCTAATTGACTTCCCGTACG
ATACCACGCTCCGTATCTTTCTATTCTCGCCCTGCCCTCTGCACGCCGCT
CCTTTTCTCTACCCTGCTCGCCCCTGCCGCCATCGCCCCCCCCCCCCCCC
CCCCCCCCCCCCGACCTTCCCGCCGTCGCCCCCCCCCCCCCCGCGCGCGC
GCACGCTTTTAGAACGCCCTCTCAGAGAGTGTGGAGTTTCCGCGGCTAGA
GGGCATGGACGGGACCAAGGGAGCTGGGGGGGCGAGGGTGCACAGCAGTA
GCGGCGGCGGCGGTGGCGGGAGGGGGGGCTCAGCAGAGGGTCCTCGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6956:4566..10115-

>mRNA_L-elsbetiae_contig6956.15729.1 ID=mRNA_L-elsbetiae_contig6956.15729.1|Name=mRNA_L-elsbetiae_contig6956.15729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:4566..10115- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCTCGAACGGGACATCTAGGGGCGGCTCCTCCGCAGTACCGGGAGT
TGGCGGGCGCGGGGGTCCACAGCAGGTGGCGAGGGTCATCACGTCAGCGG
CGTGGGACCTACGCCTGAAGCGATGCGAGGTAGCCAAGGGAGACCTGAAC
GAGATGAGCTCGAACGGGACATCTAGGGGCGGCTCCTCCGCAGTACCGGG
AGTTGGCGGGCGCGGGGGTCCACAGCAGGTGGCGAGGGTCATCACGTCAG
CGGCGTGGGACCTACGCCTGAAGCGATGCGAGGTAGCCAAGGGAGACCTG
AACGAGCTGGTGATGAACTATCTGGTCGTAGAGGGCTACCGGGACGCGGC
GGAGCACTTCGTCGAGGAGTCCGGGACGGAGGCGAAGGTGGACTTGAATA
CGATCGAGGAGAGAGTTGCGATAAGGAAGCTGGTGATGAACTATCTGGTC
GTAGAGGGCTACCGGGACGCGGCGGAGCACTTCGTCGAGGAGTCCGGGAC
GGAGGCGAAGGTGGACTTGAATACGATCGAGGAGAGAGTTGCGATAAGGA
AGGCGATGATGCAAGGGGACGTGGTGCAGGCCACGGAGCTGGCGAACGAC
CTGGACCCCACCATGCTCGACAGGGATAGGCGATGATGCAAGGGGACGTG
GTGCAGGCCACGGAGCTGGCGAACGACCTGGACCCCACCATGCTCGACAG
GGATAGAGAGCTTCGATTCGGGCTGCTGAAGCAGCGGCTGCTGGAGCTGG
TGAAGAAAGGCGACGAGGACGGGGCCCTCAAGTTCGCGGTGGAACGCCTC
GCCCCCGAGGGCGCGAGAGACCCGGCGATGCTGAGGGAGATCGAGGAGGC
GGTATCGTTGCTGGCGTACGAGAGAGCTTCGATTCGGGCTGCTGAAGCAG
CGGCTGCTGGAGCTGGTGAAGAAAGGCGACGAGGACGGGGCCCTCAAGTT
CGCGGTGGAACGCCTCGCCCCCGAGGGCGCGAGAGACCCGGCGATGCTGA
GGGAGATCGAGGAGGCGGTATCGTTGCTGGCGTACGAGGACCCGTCCGCG
TGCCCCCTGTCCGACCTGCTGGGCATGGAGCAGCGGCAGGCCTCGGCCGG
CCGGCTGAACGCGGCGGTGCTGCAGAGCCAGCAGCAGGAGAAGGGGCCGT
GGTTGCCCGACCTCCTCCGGCAGCTCGTCTACTCTCAGGACCCGTCCGCG
TGCCCCCTGTCCGACCTGCTGGGCATGGAGCAGCGGCAGGCCTCGGCCGG
CCGGCTGAACGCGGCGGTGCTGCAGAGCCAGCAGCAGGAGAAGGGGCCGT
GGTTGCCCGACCTCCTCCGGCAGCTCGTCTACTCTCAGAACGCCCTCTCA
GAGAGTGTGGAGTTTCCGCGGCTAGAGGGCATGGACGGGACCAAGGGAGC
TGGGGGGGCGAGGGTGCACAGCAGTAGCGGCGGCGGCGGTGGCGGGAGGG
GGGGCTCAGCAGAGGGTCCTCGGTGAAACGCCCTCTCAGAGAGTGTGGAG
TTTCCGCGGCTAGAGGGCATGGACGGGACCAAGGGAGCTGGGGGGGCGAG
GGTGCACAGCAGTAGCGGCGGCGGCGGTGGCGGGAGGGGGGGCTCAGCAG
AGGGTCCTCGGTGA
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