mRNA_L-elsbetiae_contig6956.15727.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 198 bits (504), Expect = 6.570e-53 Identity = 142/352 (40.34%), Postives = 186/352 (52.84%), Query Frame = 2 Query: 287 RVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGAD--VEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFA-GRTPLCVATEAGGSKALLALLRKGAAVGARATKGST 1333 + S G E+EIFK+VS GATPEQWA WLRAPLEHAAA GNL LVD+LL AG DG AGW+GC GR+LL A P+VN V S T RS LYQ+ HEAAAR I+AGADV F D K L A+ G + L +L++ GA+ V R+S G ++++ +S K H+A V+ LLAAG T + SAL +A+ + +++AL+ HG DV G+ +N LH AA + G + L++AGAD+++K +F GRT L A E G ++ALLALLR+GA V GST Sbjct: 5 QTSPSGEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTG---RSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANT------------------ASVLLSSPSTDKNGHVATVKVLLAAGADTDIRD-------LDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWN--PLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGST 326
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 198 bits (503), Expect = 2.410e-52 Identity = 144/346 (41.62%), Postives = 186/346 (53.76%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFA--GRTPLCVATEAGGSKALLALLRKG 1297 M Y KR LEG E+EIFKL+ GATPEQWAEWLRAPLEHAAA GNLGLV++LL AGA+G AGW+GC GR +L A +VN V ++ S RS L+ A+ CGHEAAA+ I+AGADV DP LH A+ G L L+IGGA +R SGR G S L+ AS G H + VE LL AG G H G +A+D A +GHV +I+A++ +G +V++ D + L+ALH+A A AVD L++AGAD+ K+ A G TPL V +A++ALL++G Sbjct: 1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVV---SLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGG----HCSTVEALLRAGADMNLRHAG--GAHLG-MTAMDVAVSKGHVGVIEAIVENGGNVRATDT-YGLTALHHAR---GAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRG 332
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 187 bits (476), Expect = 7.240e-51 Identity = 141/348 (40.52%), Postives = 180/348 (51.72%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAAL-GDQAG-AVDALIEAGADMEMKSNFAGRTPLCVATEAGGSKALLALLRKGAAV 1306 M + +R SL+GL E+FKLVS GA+ EQWAEWLR PLEHAA+ GN LV++LL AGAD AGW+GC GR LL A A +VN V TV S RS L+ AT CGHEAAA+ ++ GADV F DP K +VL +AI G QL DL IGGA R+ G +G + + ++ HLA VETLL AG + +S LD A+ +PI++A++ G DV + D+ +ALH A L D+AG AV LIEAGA+ E+K N G TPL A + ALL+ A+V Sbjct: 1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKV---TVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCG-------------------------------LGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQ-------WADYSPLDVAAEHRALPILEAILGRGVDVDAQDRA-GCTALHTAVLFSDRAGPAVHMLIEAGANTELK-NGGGWTPLHAAAVHHRVNCMAALLQNNASV 305
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 164 bits (414), Expect = 9.600e-41 Identity = 153/364 (42.03%), Postives = 193/364 (53.02%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVG-HSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFS---ALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFAGRTPL---CVATEAG-GSKALLALLRKGAAVGARATKGSTP 1336 M Y KR LEG E+EIFKL+S ATPEQWA+WLRAPLEHAAA GN+GLV++LL AGADG AGW+GC GR +L A XXXXXXXXXXXXXX P+VN V +V S RS L+ A CGHEAAAR ++AGA++ DP + H A GG L +L+IGGA +R GR HS L+ AS NG H + VE LL AG T + C+ GG S AL+ A E V + +G I LH +A+ + AL++ + + + N AGR+ L C+ +G G A+ LLR GA+ A T+G TP Sbjct: 1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVV---SVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASA-NG---HRSTVEALLRAGADTT------LRCYSGGVSDMAALEMAGGE-VVDVXXXXXXXXXXXXAGGSI----PLHASAVHGHDETMVALLKREGNFDEQDN-AGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETP 345
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.170e-40 Identity = 120/301 (39.87%), Postives = 152/301 (50.50%), Query Frame = 2 Query: 284 KRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFS---ALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAV 1174 KR LE E+EIFKL+S GATPE+WAEWLRAP EHAAA GN+GLV++LL AGADG AGW+GC R +L A P+VN V +V S RS L+ A HEAAAR ++AGAD DP + T H A GG + L + + GGA +R+ GR G S L+ AS + H + VE LL AG T R A G FS ALD A+ +GHV +++A++ +G D + D +ALH AAL G V Sbjct: 6 KRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVV---SVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLAS----RNGHRSTVEVLLRAGADTTRR-----ATDSGDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDD-HGCTALHYAALHKHGGEV 293
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 159 bits (402), Expect = 9.520e-39 Identity = 155/364 (42.58%), Postives = 190/364 (52.20%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VGHSALINASGGNGKKPHLAAVETLLAAGV--STRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAAL-GDQAG-AVDALIEAGADMEMKSNFAGRTPLCVATEAGGSKALLALLRKGAAVGARA-TKGSTPF 1339 M + +R SL+GL E+FKLVS GA+ EQWAEWLR LEHAA+ GNL LV++LL AGAD +GW+GC R LL A XXXXXXXXXXXXXXXXA +VN V TV S RS LY AT CGHEAAA+ I+AG+DV F DP K +VL +AI G Q DL+IGGA R+ G + + L+ A ++ HLA VETLL AG S R+ E +S V + D+ +ALH A L D+AG AV L++A AD E+KS G TPL A E + ALL+ A+V R G TP Sbjct: 1 MHIFPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKV---TVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETPLMLAV----RRGHLAIVETLLEAGADCSLRQLED---------YSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRA-GCTALHTAILFSDRAGPAVHMLVKARADTELKS-VGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPL 346
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE) HSP 1 Score: 152 bits (383), Expect = 3.670e-38 Identity = 114/263 (43.35%), Postives = 129/263 (49.05%), Query Frame = 2 Query: 341 ATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVS-YTVL--------SIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADV 1102 ATPEQWAEWLR PLEHAAA+G+L LVDKLLGAGADGSA +KGC GR L A AQP+VN V +VL + RSPLYQAT GHEA ARL I+AGA+V F D G +V+ + GADV A +S R G SALI AS G K H ETLLAAG R SALD AS+ GHVP I AL+RHG + Sbjct: 8 ATPEQWAEWLRVPLEHAAAQGSLVLVDKLLGAGADGSANYKGCAGRILRQAAAVGGSKGVVSSLLRARAQPDVNEFVDDLSVLHEGHQPFPNFRSPLYQATLNGHEATARLPILAGANVNFVDLWGGHSVI----------------MSGADVRAHDSHDRTPLHLATMEGLDGIVSPLVFRGVDKDAVDKYGRSALIIASC-VGDKAHSTVDETLLAAGADLSIRNNFRA-------SALDSASLHGHVPTIHALVRHGVAI 246
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.910e-34 Identity = 126/347 (36.31%), Postives = 151/347 (43.52%), Query Frame = 2 Query: 278 YLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAG--VSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFAGRTPLCVATEAGGS-KALLALLRKGAAV 1306 Y +R LEG E+ IF L+S GATPEQW EWLRAPLEHAAA G LV+KLL AGADG AGW GC GR LL A P+VN V +V S RS L+ + CGHEAAAR I+AGAD DP AR+ GR G S L AS ++ HL+ V+TLL AG VS R +HG +ALH +QAGA+D L++AGADM+ K + TPLCVA E G S +A+ LLR+G V Sbjct: 2 YPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVV---SVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVAS----QRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHG-----------YTALHAGCAMNQAGAMDVLLDAGADMDRKC-YGASTPLCVAIEFGASVQAVHTLLRRGCQV 329
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 146 bits (368), Expect = 3.260e-34 Identity = 82/147 (55.78%), Postives = 92/147 (62.59%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLH 709 M Y +R L+G+E EI+KLVS ATP+QW EWLR PLEHAAA GNL LV LLGAGADGSAGW+GC GR L+ A AQ +VN V +V S RS LY AT CGHE AAR + AGADV F DP VLH Sbjct: 1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVV---SVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLH 144
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.960e-33 Identity = 79/141 (56.03%), Postives = 89/141 (63.12%), Query Frame = 2 Query: 269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDG 691 M Y +R +G+ EI+KLVS ATP+QW EWLR PLEHAAA GNL LV+ LL AGADGSAGWKGC GR L+ A AQP+VN V +V S RS LY AT CGH+ AAR I AGADV F DP G Sbjct: 1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVV---SVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTG 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6956.15727.1 >prot_L-elsbetiae_contig6956.15727.1 ID=prot_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVback to top mRNA from alignment at L-elsbetiae_contig6956:2..1865+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6956.15727.1 ID=mRNA_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1864bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:2..1865+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6956:2..1865+ >mRNA_L-elsbetiae_contig6956.15727.1 ID=mRNA_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:2..1865+ (Laminarionema elsbetiae ELsaHSoW15)back to top |