mRNA_L-elsbetiae_contig6956.15727.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6956.15727.1
Unique NamemRNA_L-elsbetiae_contig6956.15727.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 6.570e-53
Identity = 142/352 (40.34%), Postives = 186/352 (52.84%), Query Frame = 2
Query:  287 RVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGAD--VEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFA-GRTPLCVATEAGGSKALLALLRKGAAVGARATKGST 1333
            + S  G E+EIFK+VS GATPEQWA WLRAPLEHAAA GNL LVD+LL AG DG AGW+GC GR+LL A                   P+VN V S T    RS LYQ+    HEAAAR  I+AGADV F D   K   L  A+  G + L  +L++ GA+  V  R+S G                                  ++++ +S    K  H+A V+ LLAAG  T   +           SAL +A+    + +++AL+ HG DV  G+  +N   LH AA  +  G +  L++AGAD+++K +F  GRT L  A E G ++ALLALLR+GA V      GST
Sbjct:    5 QTSPSGEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTG---RSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANT------------------ASVLLSSPSTDKNGHVATVKVLLAAGADTDIRD-------LDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWN--PLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGST 326          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.410e-52
Identity = 144/346 (41.62%), Postives = 186/346 (53.76%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFA--GRTPLCVATEAGGSKALLALLRKG 1297
            M  Y KR  LEG E+EIFKL+  GATPEQWAEWLRAPLEHAAA GNLGLV++LL AGA+G AGW+GC GR +L A                    +VN V   ++ S RS L+ A+ CGHEAAA+  I+AGADV   DP      LH A+ G    L   L+IGGA   +R  SGR                                G S L+ AS G     H + VE LL AG        G    H G  +A+D A  +GHV +I+A++ +G +V++ D  + L+ALH+A     A AVD L++AGAD+  K+  A  G TPL V       +A++ALL++G
Sbjct:    1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVV---SLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGG----HCSTVEALLRAGADMNLRHAG--GAHLG-MTAMDVAVSKGHVGVIEAIVENGGNVRATDT-YGLTALHHAR---GAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRG 332          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 7.240e-51
Identity = 141/348 (40.52%), Postives = 180/348 (51.72%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAAL-GDQAG-AVDALIEAGADMEMKSNFAGRTPLCVATEAGGSKALLALLRKGAAV 1306
            M  + +R SL+GL  E+FKLVS GA+ EQWAEWLR PLEHAA+ GN  LV++LL AGAD  AGW+GC GR LL A                 A  +VN V   TV S RS L+ AT CGHEAAA+  ++ GADV F DP  K +VL +AI G   QL  DL IGGA    R+  G                               +G +  +       ++ HLA VETLL AG      +          +S LD A+    +PI++A++  G DV + D+    +ALH A L  D+AG AV  LIEAGA+ E+K N  G TPL  A        + ALL+  A+V
Sbjct:    1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKV---TVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCG-------------------------------LGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQ-------WADYSPLDVAAEHRALPILEAILGRGVDVDAQDRA-GCTALHTAVLFSDRAGPAVHMLIEAGANTELK-NGGGWTPLHAAAVHHRVNCMAALLQNNASV 305          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 9.600e-41
Identity = 153/364 (42.03%), Postives = 193/364 (53.02%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVG-HSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFS---ALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFAGRTPL---CVATEAG-GSKALLALLRKGAAVGARATKGSTP 1336
            M  Y KR  LEG E+EIFKL+S  ATPEQWA+WLRAPLEHAAA GN+GLV++LL AGADG AGW+GC GR +L A XXXXXXXXXXXXXX    P+VN V   +V S RS L+ A  CGHEAAAR  ++AGA++   DP  +    H A  GG   L  +L+IGGA   +R   GR                                 HS L+ AS  NG   H + VE LL AG  T       + C+ GG S   AL+ A  E  V +            +G  I     LH +A+      + AL++   + + + N AGR+ L   C+   +G G  A+  LLR GA+  A  T+G TP
Sbjct:    1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVV---SVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASA-NG---HRSTVEALLRAGADTT------LRCYSGGVSDMAALEMAGGE-VVDVXXXXXXXXXXXXAGGSI----PLHASAVHGHDETMVALLKREGNFDEQDN-AGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETP 345          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.170e-40
Identity = 120/301 (39.87%), Postives = 152/301 (50.50%), Query Frame = 2
Query:  284 KRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFS---ALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAV 1174
            KR  LE  E+EIFKL+S GATPE+WAEWLRAP EHAAA GN+GLV++LL AGADG AGW+GC  R +L A                   P+VN V   +V S RS L+ A    HEAAAR  ++AGAD    DP  + T  H A  GG + L  + + GGA   +R+  GR                                G S L+ AS    +  H + VE LL AG  T R      A   G FS   ALD A+ +GHV +++A++ +G D  + D     +ALH AAL    G V
Sbjct:    6 KRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVV---SVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLAS----RNGHRSTVEVLLRAGADTTRR-----ATDSGDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDD-HGCTALHYAALHKHGGEV 293          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 9.520e-39
Identity = 155/364 (42.58%), Postives = 190/364 (52.20%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VGHSALINASGGNGKKPHLAAVETLLAAGV--STRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAAL-GDQAG-AVDALIEAGADMEMKSNFAGRTPLCVATEAGGSKALLALLRKGAAVGARA-TKGSTPF 1339
            M  + +R SL+GL  E+FKLVS GA+ EQWAEWLR  LEHAA+ GNL LV++LL AGAD  +GW+GC  R LL A XXXXXXXXXXXXXXXXA  +VN V   TV S RS LY AT CGHEAAA+  I+AG+DV F DP  K +VL +AI G   Q   DL+IGGA    R+  G                                 +  + L+ A     ++ HLA VETLL AG   S R+ E          +S                       V + D+    +ALH A L  D+AG AV  L++A AD E+KS   G TPL  A E      + ALL+  A+V  R    G TP 
Sbjct:    1 MHIFPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKV---TVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETPLMLAV----RRGHLAIVETLLEAGADCSLRQLED---------YSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRA-GCTALHTAILFSDRAGPAVHMLVKARADTELKS-VGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPL 346          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 3.670e-38
Identity = 114/263 (43.35%), Postives = 129/263 (49.05%), Query Frame = 2
Query:  341 ATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVS-YTVL--------SIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADV 1102
            ATPEQWAEWLR PLEHAAA+G+L LVDKLLGAGADGSA +KGC GR L  A                 AQP+VN  V   +VL        + RSPLYQAT  GHEA ARL I+AGA+V F D  G  +V+                + GADV A +S  R                               G SALI AS   G K H    ETLLAAG         R        SALD AS+ GHVP I AL+RHG  +
Sbjct:    8 ATPEQWAEWLRVPLEHAAAQGSLVLVDKLLGAGADGSANYKGCAGRILRQAAAVGGSKGVVSSLLRARAQPDVNEFVDDLSVLHEGHQPFPNFRSPLYQATLNGHEATARLPILAGANVNFVDLWGGHSVI----------------MSGADVRAHDSHDRTPLHLATMEGLDGIVSPLVFRGVDKDAVDKYGRSALIIASC-VGDKAHSTVDETLLAAGADLSIRNNFRA-------SALDSASLHGHVPTIHALVRHGVAI 246          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 2.910e-34
Identity = 126/347 (36.31%), Postives = 151/347 (43.52%), Query Frame = 2
Query:  278 YLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAISGGLEQLAKDLMIGGADVEARNSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-GHSALINASGGNGKKPHLAAVETLLAAG--VSTRRAEPGRVACHRGGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAGAVDALIEAGADMEMKSNFAGRTPLCVATEAGGS-KALLALLRKGAAV 1306
            Y +R  LEG E+ IF L+S GATPEQW EWLRAPLEHAAA G   LV+KLL AGADG AGW GC GR LL A                   P+VN V   +V S RS L+ +  CGHEAAAR  I+AGAD    DP                              AR+  GR                                G S L  AS    ++ HL+ V+TLL AG  VS R                                 +HG            +ALH     +QAGA+D L++AGADM+ K  +   TPLCVA E G S +A+  LLR+G  V
Sbjct:    2 YPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVV---SVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVAS----QRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHG-----------YTALHAGCAMNQAGAMDVLLDAGADMDRKC-YGASTPLCVAIEFGASVQAVHTLLRRGCQV 329          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.260e-34
Identity = 82/147 (55.78%), Postives = 92/147 (62.59%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLH 709
            M  Y +R  L+G+E EI+KLVS  ATP+QW EWLR PLEHAAA GNL LV  LLGAGADGSAGW+GC GR L+ A                 AQ +VN V   +V S RS LY AT CGHE AAR  + AGADV F DP     VLH
Sbjct:    1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVV---SVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLH 144          
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.960e-33
Identity = 79/141 (56.03%), Postives = 89/141 (63.12%), Query Frame = 2
Query:  269 MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLVDKLLGAGADGSAGWKGCHGRALLHAXXXXXXXXXXXXXXXXXAQPEVNSVVSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDG 691
            M  Y +R   +G+  EI+KLVS  ATP+QW EWLR PLEHAAA GNL LV+ LL AGADGSAGWKGC GR L+ A                 AQP+VN V   +V S RS LY AT CGH+ AAR  I AGADV F DP G
Sbjct:    1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVV---SVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTG 138          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6956.15727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA8_ECTSI6.570e-5340.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1F4_9PHAE2.410e-5241.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ1_9PHAE7.240e-5140.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE08_ECTSI9.600e-4142.03Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5JY41_9PHAE2.170e-4039.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLL7_ECTSI9.520e-3942.58Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KKF4_9PHAE3.670e-3843.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI2.910e-3436.31Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LS36_ECTSI3.260e-3455.78Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LRZ8_ECTSI1.960e-3356.03Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6956contigL-elsbetiae_contig6956:2..1865 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.8
Seed ortholog evalue1.7e-49
Seed eggNOG ortholog2880.D7FXA8
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size1864
Cds size1344
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6956.15727.1prot_L-elsbetiae_contig6956.15727.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6956 270..1613 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.861313-UTR-L-elsbetiae_contig6956:1..2691622816770.861313-UTR-L-elsbetiae_contig6956:1..269Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 2..269 +
1691683800.633717-UTR-L-elsbetiae_contig6956:1..2691691683800.633717-UTR-L-elsbetiae_contig6956:1..269Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 2..269 +
1622816770.8881536-UTR-L-elsbetiae_contig6956:1613..18651622816770.8881536-UTR-L-elsbetiae_contig6956:1613..1865Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 1614..1865 +
1691683800.6569588-UTR-L-elsbetiae_contig6956:1613..18651691683800.6569588-UTR-L-elsbetiae_contig6956:1613..1865Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6956 1614..1865 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.8719893-CDS-L-elsbetiae_contig6956:269..16131622816770.8719893-CDS-L-elsbetiae_contig6956:269..1613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 270..1613 +
1691683800.647229-CDS-L-elsbetiae_contig6956:269..16131691683800.647229-CDS-L-elsbetiae_contig6956:269..1613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6956 270..1613 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6956.15727.1

>prot_L-elsbetiae_contig6956.15727.1 ID=prot_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp
MSTYLKRVSLEGLEIEIFKLVSRGATPEQWAEWLRAPLEHAAAEGNLGLV
DKLLGAGADGSAGWKGCHGRALLHAAAVGGSEGVVSSLLRAGAQPEVNSV
VSYTVLSIRSPLYQATYCGHEAAARLFIMAGADVTFTDPDGKRTVLHRAI
SGGLEQLAKDLMIGGADVEARNSSGRTPLHVAAETGLDGIVSALLLRGVD
KDAVDNVGHSALINASGGNGKKPHLAAVETLLAAGVSTRRAEPGRVACHR
GGFSALDWASIEGHVPIIQALIRHGADVKSGDKIFNLSALHNAALGDQAG
AVDALIEAGADMEMKSNFAGRTPLCVATEAGGSKALLALLRKGAAVGARA
TKGSTPFAPGVLLRAKRHRCSGRHSAEMGCRRDGLGQKRRFPRRYAQRQD
KPALHVFARRYRARATPAGSGSGRSSVAPPWLAGSASFTRCQGTRPR*
back to top

mRNA from alignment at L-elsbetiae_contig6956:2..1865+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6956.15727.1 ID=mRNA_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1864bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:2..1865+ (Laminarionema elsbetiae ELsaHSoW15)
GCCGAGGGCTACCACGCCCGTTCACATACCTCAGACTACCACGTCTGCCC GGGTTACTACACCCTGAGTTTCCACACTCTACAGCAATTCGCCATCAACG GGTCTTCATACCCGTGGAGTTTTTACACCCGCTCGCATATCGAGCTTTTC CGCGACTTACTTCTACGACGTTCATCCAACTGGGCGTACTCTGCACGGAT CTACTCAACATGCCAGCTGGTCAAATGCACGACACAGGCCGCGACAGACA GGCCCGACCATTCACATTATGAGCACCTACCTCAAGCGAGTGTCCCTGGA AGGACTGGAGATCGAGATCTTCAAACTAGTCTCCAGAGGTGCCACACCAG AGCAGTGGGCCGAGTGGCTTCGGGCACCGCTCGAACACGCCGCCGCAGAA GGCAACCTCGGTCTGGTCGACAAGCTGCTAGGAGCCGGGGCGGACGGGAG TGCGGGATGGAAGGGTTGCCATGGGCGTGCCCTCCTCCACGCTGCGGCTG TCGGTGGAAGCGAAGGCGTGGTATCTTCCTTGCTTCGAGCAGGAGCTCAA CCGGAGGTCAACAGCGTGGTGTCCTACACGGTTTTATCTATCCGGTCGCC CCTGTACCAGGCGACATATTGCGGCCACGAGGCTGCCGCGAGACTTTTTA TTATGGCTGGCGCGGATGTCACCTTTACGGACCCCGATGGCAAGCGCACT GTCCTCCACAGAGCAATTTCGGGCGGCCTTGAACAGCTTGCGAAGGACTT GATGATCGGCGGAGCAGATGTCGAGGCACGGAACTCGTCCGGTCGTACTC CTCTTCACGTGGCTGCTGAGACCGGCTTGGACGGGATCGTCTCCGCCCTC TTGCTCAGGGGGGTGGACAAGGACGCGGTCGACAATGTGGGGCACTCTGC TTTGATTAACGCGTCTGGTGGCAATGGTAAGAAGCCCCACCTGGCTGCCG TGGAGACTCTGCTGGCCGCTGGTGTGAGCACCCGCAGGGCTGAGCCGGGG CGCGTCGCTTGCCATCGTGGTGGCTTCTCAGCACTCGACTGGGCTAGTAT TGAGGGGCACGTTCCCATTATACAGGCTCTTATCCGGCATGGGGCGGACG TAAAGTCCGGCGATAAAATCTTTAACTTGAGCGCCCTGCACAACGCTGCT CTCGGCGACCAGGCGGGTGCGGTCGACGCCCTGATCGAGGCAGGGGCGGA CATGGAGATGAAATCGAACTTCGCTGGGAGGACGCCTCTGTGCGTTGCTA CAGAAGCCGGCGGCTCCAAAGCCCTGCTCGCTCTCTTGCGGAAGGGAGCG GCCGTCGGCGCGCGCGCCACCAAGGGAAGCACGCCTTTTGCACCTGGCGT GCTTCTTCGGGCCAAGAGGCATCGATGTAGTGGTAGACATTCTGCTGAGA TGGGGTGCCGACGAGACGGCCTTGGACAAAAGCGGCGCTTCCCCAGAAGA TACGCTCAAAGACAAGATAAACCGGCGCTGCACGTGTTCGCAAGACGATA TCGAGCGCGTGCGACGCCTGCTGGCTCGGGCTCCGGCCGATCGAGCGTGG CGCCGCCGTGGCTGGCTGGTAGTGCTTCGTTCACGCGCTGCCAGGGCACG CGCCCGCGTTGACGGCGAAGAAGAGGCTGGGGGTTCGAACGATGCTGACG ACGGTGGGACGCGCGAAGGTCGCAAGGTGGCGAGAAGTGAGGAGGACGCC GTAGGCATTGGAGGTGGCGATGGCGGGGGGCGGGCCAGCAGCGGAGTGGG CGAAGTCGAAAGCGGGGCCTTTGGCGATGTAGTGGTCAGGCTGGTGGGGC TGAAGCCGCAGGGCTTGTTTCGCACGATCCTGATATTTTTATGAGGAGGG AACCGCGACACGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6956:2..1865+

>mRNA_L-elsbetiae_contig6956.15727.1 ID=mRNA_L-elsbetiae_contig6956.15727.1|Name=mRNA_L-elsbetiae_contig6956.15727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig6956:2..1865+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCACCTACCTCAAGCGAGTGTCCCTGGAAGGACTGGAGATCGAGAT
CTTCAAACTAGTCTCCAGAGGTGCCACACCAGAGCAGTGGGCCGAGTGGC
TTCGGGCACCGCTCGAACACGCCGCCGCAGAAGGCAACCTCGGTCTGGTC
GACAAGCTGCTAGGAGCCGGGGCGGACGGGAGTGCGGGATGGAAGGGTTG
CCATGGGCGTGCCCTCCTCCACGCTGCGGCTGTCGGTGGAAGCGAAGGCG
TGGTATCTTCCTTGCTTCGAGCAGGAGCTCAACCGGAGGTCAACAGCGTG
GTGTCCTACACGGTTTTATCTATCCGGTCGCCCCTGTACCAGGCGACATA
TTGCGGCCACGAGGCTGCCGCGAGACTTTTTATTATGGCTGGCGCGGATG
TCACCTTTACGGACCCCGATGGCAAGCGCACTGTCCTCCACAGAGCAATT
TCGGGCGGCCTTGAACAGCTTGCGAAGGACTTGATGATCGGCGGAGCAGA
TGTCGAGGCACGGAACTCGTCCGGTCGTACTCCTCTTCACGTGGCTGCTG
AGACCGGCTTGGACGGGATCGTCTCCGCCCTCTTGCTCAGGGGGGTGGAC
AAGGACGCGGTCGACAATGTGGGGCACTCTGCTTTGATTAACGCGTCTGG
TGGCAATGGTAAGAAGCCCCACCTGGCTGCCGTGGAGACTCTGCTGGCCG
CTGGTGTGAGCACCCGCAGGGCTGAGCCGGGGCGCGTCGCTTGCCATCGT
GGTGGCTTCTCAGCACTCGACTGGGCTAGTATTGAGGGGCACGTTCCCAT
TATACAGGCTCTTATCCGGCATGGGGCGGACGTAAAGTCCGGCGATAAAA
TCTTTAACTTGAGCGCCCTGCACAACGCTGCTCTCGGCGACCAGGCGGGT
GCGGTCGACGCCCTGATCGAGGCAGGGGCGGACATGGAGATGAAATCGAA
CTTCGCTGGGAGGACGCCTCTGTGCGTTGCTACAGAAGCCGGCGGCTCCA
AAGCCCTGCTCGCTCTCTTGCGGAAGGGAGCGGCCGTCGGCGCGCGCGCC
ACCAAGGGAAGCACGCCTTTTGCACCTGGCGTGCTTCTTCGGGCCAAGAG
GCATCGATGTAGTGGTAGACATTCTGCTGAGATGGGGTGCCGACGAGACG
GCCTTGGACAAAAGCGGCGCTTCCCCAGAAGATACGCTCAAAGACAAGAT
AAACCGGCGCTGCACGTGTTCGCAAGACGATATCGAGCGCGTGCGACGCC
TGCTGGCTCGGGCTCCGGCCGATCGAGCGTGGCGCCGCCGTGGCTGGCTG
GTAGTGCTTCGTTCACGCGCTGCCAGGGCACGCGCCCGCGTTGAATGAGC
ACCTACCTCAAGCGAGTGTCCCTGGAAGGACTGGAGATCGAGATCTTCAA
ACTAGTCTCCAGAGGTGCCACACCAGAGCAGTGGGCCGAGTGGCTTCGGG
CACCGCTCGAACACGCCGCCGCAGAAGGCAACCTCGGTCTGGTCGACAAG
CTGCTAGGAGCCGGGGCGGACGGGAGTGCGGGATGGAAGGGTTGCCATGG
GCGTGCCCTCCTCCACGCTGCGGCTGTCGGTGGAAGCGAAGGCGTGGTAT
CTTCCTTGCTTCGAGCAGGAGCTCAACCGGAGGTCAACAGCGTGGTGTCC
TACACGGTTTTATCTATCCGGTCGCCCCTGTACCAGGCGACATATTGCGG
CCACGAGGCTGCCGCGAGACTTTTTATTATGGCTGGCGCGGATGTCACCT
TTACGGACCCCGATGGCAAGCGCACTGTCCTCCACAGAGCAATTTCGGGC
GGCCTTGAACAGCTTGCGAAGGACTTGATGATCGGCGGAGCAGATGTCGA
GGCACGGAACTCGTCCGGTCGTACTCCTCTTCACGTGGCTGCTGAGACCG
GCTTGGACGGGATCGTCTCCGCCCTCTTGCTCAGGGGGGTGGACAAGGAC
GCGGTCGACAATGTGGGGCACTCTGCTTTGATTAACGCGTCTGGTGGCAA
TGGTAAGAAGCCCCACCTGGCTGCCGTGGAGACTCTGCTGGCCGCTGGTG
TGAGCACCCGCAGGGCTGAGCCGGGGCGCGTCGCTTGCCATCGTGGTGGC
TTCTCAGCACTCGACTGGGCTAGTATTGAGGGGCACGTTCCCATTATACA
GGCTCTTATCCGGCATGGGGCGGACGTAAAGTCCGGCGATAAAATCTTTA
ACTTGAGCGCCCTGCACAACGCTGCTCTCGGCGACCAGGCGGGTGCGGTC
GACGCCCTGATCGAGGCAGGGGCGGACATGGAGATGAAATCGAACTTCGC
TGGGAGGACGCCTCTGTGCGTTGCTACAGAAGCCGGCGGCTCCAAAGCCC
TGCTCGCTCTCTTGCGGAAGGGAGCGGCCGTCGGCGCGCGCGCCACCAAG
GGAAGCACGCCTTTTGCACCTGGCGTGCTTCTTCGGGCCAAGAGGCATCG
ATGTAGTGGTAGACATTCTGCTGAGATGGGGTGCCGACGAGACGGCCTTG
GACAAAAGCGGCGCTTCCCCAGAAGATACGCTCAAAGACAAGATAAACCG
GCGCTGCACGTGTTCGCAAGACGATATCGAGCGCGTGCGACGCCTGCTGG
CTCGGGCTCCGGCCGATCGAGCGTGGCGCCGCCGTGGCTGGCTGGTAGTG
CTTCGTTCACGCGCTGCCAGGGCACGCGCCCGCGTTGA
back to top