mRNA_L-elsbetiae_contig6938.15709.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6938.15709.1
Unique NamemRNA_L-elsbetiae_contig6938.15709.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: D8LM08_ECTSI (SPX domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM08_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.610e-85
Identity = 141/182 (77.47%), Postives = 161/182 (88.46%), Query Frame = 2 
Query:  623 EIADDHADYIRLKRQESVELGLSAAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEARGNLQNSWAVPSGNTLTPLFGAYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSVL 1168
            EI +DHA+Y+R+KRQES E G++AAAEFFG +D+EL KVEEFYKGKYAELDQIL  FEARGN+ NSWAVPSGNTLTP F AY+EITAL  F EMNGEGFRKIVKKYDKTMGT+FL SFLERL + EFYQS+G ++LLER+QG+VSRDKLLDMKRHAELA MDSS+K +F AVKFTPLV S+L
Sbjct:  125 EIVEDHANYVRMKRQESAEEGMTAAAEFFGAIDQELHKVEEFYKGKYAELDQILRDFEARGNMMNSWAVPSGNTLTPFFEAYSEITALGAFSEMNGEGFRKIVKKYDKTMGTDFLTSFLERLRRQEFYQSKGPDSLLERLQGMVSRDKLLDMKRHAELAQMDSSQKEVFTAVKFTPLVVSLL 306
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A5D6XQQ2_9STRA (SPX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.280e-18
Identity = 67/205 (32.68%), Postives = 105/205 (51.22%), Query Frame = 2 
Query:  599 AAAVSSGTEIADDHADYIRLKRQESVELGLSAAAE-------FFGTVDEELRKVEEFYKGKYAELDQILAGFE--------ARGNLQ-NSWAVPSGNTLTPLFGAYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSV 1165
            AAA+++G+   DD A ++R++  ES  L  +A  E       F+    + LR V +F+ GK   L++ +  FE        +RG++      +   +  + L   Y  +  L  FV++N  GFRKIVKKYDKT+    L+ F++RL K +FY S+  + L ERV GL S+DKL        +  M   + ++   VKF P   S+
Sbjct:   65 AAAIAAGSS--DDDAGHVRVRMDESHPLLRAAVDEVQEAKDDFWEVTGDNLRVVNDFFTGKVVSLEKSVKDFEESMLDEQNSRGHVHVRGRTLSQDHGFSGLQDIYDTLVDLRTFVQINHSGFRKIVKKYDKTVKENTLKDFMQRLEKEKFYASDEIDELFERVIGLTSKDKLEAGNMERRVKRMQGDQHSLLRKVKFVPFSVSL 267
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A3R7K7S0_9STRA (SPX domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K7S0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.470e-14
Identity = 57/168 (33.93%), Postives = 83/168 (49.40%), Query Frame = 2 
Query:  692 AAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEAR--------GNLQNSWAVPS--GNTLTPLFGAYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSV 1165
            A  +F+   D  L+ V +FY GK  ++ + +  FEA         G++       S   ++   L   Y  +  L  F+++N  GFRKIVKK+DKT     L++F+ERL    FY S   + LLERV GL SRDKL        +  M   + ++F  VK  PL  S+
Sbjct:   79 AKNQFWEVTDANLKIVNDFYVGKIVKMQRSVREFEAMLQDEQTTTGHVHTRSRTHSQVDHSFAVLQDIYDTLVDLRTFIQINHSGFRKIVKKFDKTTKAHTLDTFMERLSNERFYASTEIDDLLERVFGLTSRDKLEAGNMERRMQRMQGDQNSLFRKVKPIPLGISL 246
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A8K1CGA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGA9_PYTOL)

HSP 1 Score: 86.3 bits (212), Expect = 1.500e-14
Identity = 56/173 (32.37%), Postives = 80/173 (46.24%), Query Frame = 2 
Query:  689 SAAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFE--------------ARGNLQNSWAVPSGNTLTPLFGAYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSV 1165
            +A  +F+   DE L+ V +F+ GK   + ++L  FE              ARG   +      G     L   Y  +  L  FV++N  GFRKIVKK+DKTM    LE F++RL   +FY S     L +RV  L S+DKL        +  M   + ++   VKF P   +V
Sbjct:  103 AARDDFWDVTDENLKTVNDFFAGKIVSMKKLLKDFEEGLHDEQASHGHVHARGRSLSLSQADHG--FAALQDIYDTLVDLRTFVQINHSGFRKIVKKFDKTMKESNLEGFMKRLESEQFYASNDVNALFDRVFRLTSKDKLEAGNMERRMQKMQGDQHSLLRKVKFVPFCIAV 273
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: K3WUL6_GLOUD (SPX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL6_GLOUD)

HSP 1 Score: 85.1 bits (209), Expect = 3.590e-14
Identity = 56/173 (32.37%), Postives = 85/173 (49.13%), Query Frame = 2 
Query:  689 SAAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFE--------ARGNLQNSWAVPSGNTLTPLFG------AYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSV 1165
            +A  +F+    + L  V +FY GK   L + +  FE        +RG++ +      G TL+   G       Y  +  L  FV++N  GFRKIVKK+DKT     L+ F++RL K +FY S   + L++RV GL S+DKL        +  M   + ++   VKF P   S+
Sbjct:  107 AAKEDFWEVTGDNLSVVNDFYTGKVVSLQKSIKDFEETLADEQNSRGHVHSR-----GRTLSQDHGFAALQDIYDTLVDLRTFVQINHSGFRKIVKKFDKTTKDNQLKQFMKRLEKEKFYASNDIDLLMDRVFGLTSKDKLEAGNMERRVKRMQGDQHSLLRKVKFVPFSISL 274
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A485K718_9STRA (Aste57867_156 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K718_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 6.430e-14
Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2 
Query:  692 AAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEA---------RGNLQNSWAVPSGNTLTPLFG---AYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFS 1162
            A  EF+   +  ++   +FY+GK   + +I+  FE+          G++ +     S  T     G    Y  +  L +FV +N  GFRKIVKKYDKT G   LE+F+++L++ +FY S   E LLER+  + S+DKL        +     ++ ++   VK  P   S
Sbjct:  112 AKREFWEMTNANIQSANDFYRGKITHIAKIVKDFESMLRNEDKASHGHVSSKPRTISHETDRGFAGIQECYDTLVDLKQFVNLNHTGFRKIVKKYDKTAGESALEAFMKQLNREDFYSSNDIEGLLERLFSITSKDKLEAGNMEQRIKRQQGNQDSLLRKVKLVPFSIS 280
[Close]
BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A067D4F4_SAPPC (SPX domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D4F4_SAPPC)

HSP 1 Score: 82.4 bits (202), Expect = 2.740e-13
Identity = 58/217 (26.73%), Postives = 97/217 (44.70%), Query Frame = 2 
Query:  569 PPGYATGE-----AGAAAVSSGTEIADDHADYIRLKRQESVELGLSAAAE----FFGTVDEELRKVEEFYKGKYAELDQILAGFEARGNLQNSWAVPSGNTLTPLFG----------AYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFS 1162
            PP    G      +G    +SG +   + +  +      S +L L   AE    F+   +  ++   +FY+ K   + + +  FE+    +   A    +T  P F           AY  +  L  FV +N  GFRKIVKK+DKT G + L  F+++L++ +FY S   + LL+R+ G+ S+DKL        +     ++ ++F  VK  P   S
Sbjct:   58 PPNVTAGSDEDATSGITRTASGRKKVTEASPLLEPSTLSSSDLNLEGIAEAKTEFWAMTNANIQIANDFYRAKITNIAKNIKDFESMLRDEGKTAHGHVSTHNPTFSHEGGFAAIQDAYDTLIDLKAFVNLNHTGFRKIVKKFDKTTGEDALGGFMKQLNREDFYASNDVDGLLDRLFGITSKDKLEAGNMEGRIRRQQGNQDSLFRKVKVVPFAVS 274
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A396ZSG3_9STRA (SPX domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZSG3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.810e-13
Identity = 52/169 (30.77%), Postives = 81/169 (47.93%), Query Frame = 2 
Query:  692 AAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEA---------RGNLQNSWAVPSGNTLTPLFG---AYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFS 1162
            A  EF+   +  +    EFY+ K   L +I+  FE+          G++ +     S        G    Y  +  L +FV +N  GFRKIVKK+DKT G + L++F+++L+  EFY S   + LLER+  + S+DKL        +     S+ ++   VK  P V S
Sbjct:  111 AKREFWDMTNANIADANEFYRSKVTHLAKIVKDFESMLRDEDKASHGHVSSKPRTTSHEVDRGFAGIQDCYDTLIDLKQFVNLNHTGFRKIVKKFDKTTGGDTLDAFVKQLNHEEFYASHDIDALLERLFSMTSKDKLEAGNLEQRMKRQQGSQDSLLRKVKAVPFVIS 279
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BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A484DYF7_BRELC (SPX domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYF7_BRELC)

HSP 1 Score: 80.9 bits (198), Expect = 8.560e-13
Identity = 57/171 (33.33%), Postives = 84/171 (49.12%), Query Frame = 2 
Query:  692 AAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEARGNLQNSWAVPSGNTLT-------------PLFGAYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSV 1165
            A  +F+  +D  L+ V +FY GK   L + +  FE    L+N    P+G+  T              L   Y  +  L  FV++N  GFRKIVKK+DKT+     E+FLERL+  +FY+S   + LL+RV  L S+DKL        +  M   + ++   VK  P   S+
Sbjct:   80 AKDQFWEVLDANLKIVNDFYIGKVVTLKRSVGEFEVM--LENDKR-PTGHVHTRTRTHSQAEHGFAALQEIYDTLVDLRAFVQINFSGFRKIVKKFDKTIKAHQQEAFLERLNHEQFYESASIDALLKRVFCLTSKDKLESGNMERRMRRMQGDQHSLLRKVKLLPFGISL 247
[Close]
BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Match: A0A3R7WJA7_9STRA (SPX domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WJA7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.620e-12
Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 2 
Query:  692 AAAEFFGTVDEELRKVEEFYKGKYAELDQILAGFEA---------RGNLQNSWAVPSGNTLTPLFG---AYTEITALVKFVEMNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGLVSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFS 1162
            A  EF+   +  +    EFY+ K   L +I+  FE+          G++ +     S        G    Y  +  L +FV +N  GFRKIVKK+DKT G + L++F+++L+  EFY S   + LLER+  + S+DKL        +      + ++   VK  P V S
Sbjct:  112 AKREFWDMTNANIADANEFYRSKVTHLAKIVKDFESMLRDEDKESHGHVSSKPRTTSHEVDRGFAGIQDCYDTLIDLKQFVNLNHTGFRKIVKKFDKTTGGDTLDAFVKQLNHEEFYASHDIDALLERLFSMTSKDKLEAGNLEQRMKRQQGGQDSLLRKVKAVPFVIS 280
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6938.15709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LM08_ECTSI1.610e-8577.47SPX domain-containing protein (Fragment) n=2 Tax=E... [more]
A0A5D6XQQ2_9STRA2.280e-1832.68SPX domain-containing protein n=1 Tax=Pythium bras... [more]
A0A3R7K7S0_9STRA1.470e-1433.93SPX domain-containing protein n=3 Tax=Phytophthora... [more]
A0A8K1CGA9_PYTOL1.500e-1432.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WUL6_GLOUD3.590e-1432.37SPX domain-containing protein n=1 Tax=Globisporang... [more]
A0A485K718_9STRA6.430e-1430.77Aste57867_156 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A067D4F4_SAPPC2.740e-1326.73SPX domain-containing protein n=4 Tax=Saprolegniac... [more]
A0A396ZSG3_9STRA3.810e-1330.77SPX domain-containing protein n=5 Tax=Aphanomyces ... [more]
A0A484DYF7_BRELC8.560e-1333.33SPX domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A3R7WJA7_9STRA1.620e-1230.18SPX domain-containing protein (Fragment) n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6938contigL-elsbetiae_contig6938:1018..9364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.4
Seed ortholog evalue6.5e-33
Seed eggNOG ortholog2880.D8LM08
Preferred namePHO91
KEGG rclassRC00210,RC00700,RC02868
KEGG koko:K01694,ko:K14430,ko:K20183
KEGG TC2.A.47.2
KEGG ReactionR02722
KEGG Pathwayko00260,ko00400,ko01100,ko01110,ko01130,ko01230,ko04138,map00260,map00400,map01100,map01110,map01130,map01230,map04138
KEGG ModuleM00023
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006082,GO:0006793,GO:0006797,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009987,GO:0010966,GO:0015075,GO:0015169,GO:0015291,GO:0015318,GO:0015605,GO:0015698,GO:0015711,GO:0015748,GO:0015794,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0032879,GO:0034220,GO:0034762,GO:0034765,GO:0035435,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043436,GO:0044070,GO:0044232,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0051049,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0071702,GO:0071704,GO:0071944,GO:0097080,GO:0098588,GO:0098656,GO:0098660,GO:0098661,GO:0098805,GO:0098852,GO:1901264,GO:1901505,GO:1903795,GO:1903959,GO:1990816,GO:2000185
EggNOG free text desc.succinate transmembrane transporter activity
EggNOG OGsCOG0471@1,KOG1281@2759
EC4.2.1.20
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04131
Ec32 ortholog descriptionSodium/sulphate symporter
Ec32 orthologEc-14_002400.1
Exons8
Model size1168
Cds size267
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816769.2483854-CDS-L-elsbetiae_contig6938:1017..11391622816769.2483854-CDS-L-elsbetiae_contig6938:1017..1139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 1018..1139 -
1691683799.3918598-CDS-L-elsbetiae_contig6938:1017..11391691683799.3918598-CDS-L-elsbetiae_contig6938:1017..1139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 1018..1139 -
1622816769.260676-CDS-L-elsbetiae_contig6938:1645..17191622816769.260676-CDS-L-elsbetiae_contig6938:1645..1719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 1646..1719 -
1691683799.4103363-CDS-L-elsbetiae_contig6938:1645..17191691683799.4103363-CDS-L-elsbetiae_contig6938:1645..1719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 1646..1719 -
1622816769.2712567-CDS-L-elsbetiae_contig6938:2599..26701622816769.2712567-CDS-L-elsbetiae_contig6938:2599..2670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 2600..2670 -
1691683799.4205282-CDS-L-elsbetiae_contig6938:2599..26701691683799.4205282-CDS-L-elsbetiae_contig6938:2599..2670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6938 2600..2670 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816769.2848918-UTR-L-elsbetiae_contig6938:2670..27701622816769.2848918-UTR-L-elsbetiae_contig6938:2670..2770Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 2671..2770 -
1691683799.4297497-UTR-L-elsbetiae_contig6938:2670..27701691683799.4297497-UTR-L-elsbetiae_contig6938:2670..2770Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 2671..2770 -
1622816769.2966566-UTR-L-elsbetiae_contig6938:3484..35491622816769.2966566-UTR-L-elsbetiae_contig6938:3484..3549Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 3485..3549 -
1691683799.4400933-UTR-L-elsbetiae_contig6938:3484..35491691683799.4400933-UTR-L-elsbetiae_contig6938:3484..3549Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 3485..3549 -
1622816769.3095675-UTR-L-elsbetiae_contig6938:4118..42081622816769.3095675-UTR-L-elsbetiae_contig6938:4118..4208Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 4119..4208 -
1691683799.4507675-UTR-L-elsbetiae_contig6938:4118..42081691683799.4507675-UTR-L-elsbetiae_contig6938:4118..4208Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 4119..4208 -
1622816769.3226047-UTR-L-elsbetiae_contig6938:5244..55341622816769.3226047-UTR-L-elsbetiae_contig6938:5244..5534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 5245..5534 -
1691683799.4609416-UTR-L-elsbetiae_contig6938:5244..55341691683799.4609416-UTR-L-elsbetiae_contig6938:5244..5534Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 5245..5534 -
1622816769.3353593-UTR-L-elsbetiae_contig6938:6387..64721622816769.3353593-UTR-L-elsbetiae_contig6938:6387..6472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 6388..6472 -
1691683799.4721014-UTR-L-elsbetiae_contig6938:6387..64721691683799.4721014-UTR-L-elsbetiae_contig6938:6387..6472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 6388..6472 -
1622816769.3462136-UTR-L-elsbetiae_contig6938:9093..93641622816769.3462136-UTR-L-elsbetiae_contig6938:9093..9364Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 9094..9364 -
1691683799.482806-UTR-L-elsbetiae_contig6938:9093..93641691683799.482806-UTR-L-elsbetiae_contig6938:9093..9364Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6938 9094..9364 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6938.15709.1prot_L-elsbetiae_contig6938.15709.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6938 1018..2670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6938.15709.1

>prot_L-elsbetiae_contig6938.15709.1 ID=prot_L-elsbetiae_contig6938.15709.1|Name=mRNA_L-elsbetiae_contig6938.15709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MNGEGFRKIVKKYDKTMGTEFLESFLERLHKNEFYQSEGAETLLERVQGL
VSRDKLLDMKRHAELAHMDSSEKTIFPAVKFTPLVFSVL
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mRNA from alignment at L-elsbetiae_contig6938:1018..9364-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6938.15709.1 ID=mRNA_L-elsbetiae_contig6938.15709.1|Name=mRNA_L-elsbetiae_contig6938.15709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8347bp|location=Sequence derived from alignment at L-elsbetiae_contig6938:1018..9364- (Laminarionema elsbetiae ELsaHSoW15)
AGAAGGTATTCACTGCTGGCTGTGTGTGTGCAGGCGTGCTCTCTGAGTTT
TTTCCTCAAGCACTGGAAGGCCGATCTAGGTAATCTTGATAGCTTGACGC
GGTTCGGCGAAGGAGGGAGCTTAAATACAAATTGGGCTTCAGGAAAACTG
GTGTGCGTTGAAGAGCACTCATCAAACGTTGCGACCAACGACAGAGAGCG
GACCAGCATGAAGTACGGAAAACAGCTCCGGATAAACTCTTATGGGCCCT
GGATGGACAAGTACCTGGTGAGTAATCGCGGGCGGGCTGTGGGTGTCATG
CTGAACGACCTACTACGCATTGTACCACAGCAGAAGTAAACCTTGGTGCA
TGCGTGCATGCGTGCACGCACTGATGAGGTGAGCCTCCTGGCGTCGACAT
ACTTATAGTTACACGGCACAGGTGAACGCGTTGGGGGGTTATTCGAGGGT
TGTTGCCTGCTTCCATGCTTATGCCATCGCCTCGCAGAGGTTGATCTCAA
GACATATGTATTTATCGAATCCCGGGTTCAAATTTTGAAGGTCTGCACTG
CGTGCTGCGTACCCCCAGTTCGTATCATTAGGCCTATCATTAGTGACGAA
TCAGCCGCAGGCCGAGTCTCGATTGTATTGTAGCGTAGAAATACACGCTG
AATCGGAAAGGACTCGAGATGCTCTTGTGTGCCTTCCGATTATTTTCGGG
CAATGCCACTAATAATACAGCTTATCCTTACTCGTAGGCAAGTTCGTAAA
AAAGACACTTGATGATGAAACGACCCACCACGCGGGTGCAAAGCAGCTAC
AATACAGCAACACGTGGTACAAGTCTAGCTACACTAATACATGCGTTCCG
TAAACGAAAAGGAAAGGGTTTCCCAAGAGAGCGAGAGACAGACAGACAGA
GAGAGGAGATGAATCACCGAAAAACCCACATCATCATCCGCATCGTCCGA
CGGGGTTCCCGTTTTCCAGACGTGTCAAATGTAGATGAGCGAGTAATTGC
ACTCCCTCCGCCTTGGGACAATCAAGACGAGCCAGCGCGTTTTGTACATT
GTGTTTGTTCACACACATGCAACATACATAGATACATAGATCAGATCACT
TTGGATCATCTACATATGTACGTACATAGATCTGTACGTACATAGATCAG
TTCGGTGGCAAATCGCCATTGCCACAGATGGATGTGTGCATGTTTCCCGC
CCTTGATCTATTTACTAAGACACAGATCGATCTGTGCGTGTTTGCCGCTC
TTGATCTTATACTTCCATAGATCCATCTGTGGTATTTTCGGTTCTTGATC
TATATGTAGACACAGATAGATCTGTACATGTTTGCCGCTCTTGATCTAAA
GTCCATAGACTAAATCATCTGTGGTATTTTCGCTTCTTGATCGATCTATA
ACCCTAGATCATCTAGATCATGATCTATCCCATGTGTGCATGTGGTACGG
GGTTTGATACCATAGGCCCCACAGCAGTCGTACAGCTGCCAAGATATTTG
GCGATGGTACATCTTGTTGTCAAGATATCAACGATACCTTACTGTTGTAG
TTTCAAGTAGTCGTGATTGGGTTTCGCGCTCTTTCTGATTGGATAGAGTT
GCTCACATCGTAGGGCGCGTCTTAACGTTAGAAATGTCAGCCAATTTGGA
AAGCGAATTGGAATCGAATTTGCATGTGATTGGTCAAGCCCAAAAATGCA
CCCACGGGGCTTGGCGGGTGCTAGCATTTCCATCCCACGGAGCTAGCTTT
TGGCGCACCAAAAATCAACCCTCCGGAGGGTTGATTTTTCGCATTCGCTC
GAACGTATTGGATTGACCCACGAAACGTACATGCGGCCCCCCGTGCTGGC
GCGTTTTCCCGTTTCCGCGCTTCCATACCGATCGCCTGGTACCAGCGGTT
TGGGGATAGCTGTATTGTGACAGGCCCTGTGCGCGTGTAAAAAAAAGCAG
GCTCTCTGTTTTGTGCACGGCTGCTGTTTTCGAAAAAATGATGCCAACGC
GGTGGTGTCGTTGTATCTCGACAACCCAAACGTCATTTCTAGCTGACGTT
TGAGGATGAGGTTTGGACCATGAGGACCTCTTGTTCAGACTTAACCTTGT
GACTTCCTGTGATATTTCTCTAGCTATTCACCCTGATGCACATGAGCTGC
CTGTGAACTTTCAGTCAACCTGTCGCATCGGCGGCCCCCAGGAGACATCC
GCGGTGATCGATTTCGCTCCTTCCGCGGGGGCACTGATTGTCCAGATTCG
AGCCCCAAATTCGATTTCAATTCGCTTTGCAAATTGGCCGATATTTCTAA
CGTTAAGACCCGCCCTTACCATGAGCCTGCCTGCTTGAGAACGGATATAA
TACAAGGTTAACCAAGGACCAGACTTGATCGTACATCTTGTAACACGTTA
TTGCCACGGTGATAAAATGTTGTGTGTTTTGAGCAGAGCAAGAAACGTGC
CAACAATAGCTTCAAGAGTAAAATACATACCTTTTCGGCCGGAAGCATGA
GTTCTTTGATCTACCCCTGGGGTACCAGTTTTTTCAAGAGTTCCCCCGCG
GGGGGGGTATGGGTTTTACCATTTTTTTTGTCGTTTTTTCGTGTATCCCG
AAGCCCCAAGAGCGTGATACATACATATGGGCGAAAATGTCATCTGCCGA
TCGGCGGTTTGAGCAGATCTCATGCGGCATGCATGCCATTTTTATTTATT
TATTTTTGCTTCTTCACATTTATTCCCAGTGCTCGATGGGCTCCCTGTCG
CGAGGACATCTTGCCAGAGTACTGAACCGTGGTCACACAGAAGGGTTCCT
TTCCCCAAGGCCCCCACTCCGCCCGTCTGCGGTGCTTGCCTAAGGAGGGT
TTAGCCGTCCCTTTGCCTCGTCGACGATGAGGTCGAAGTCAGCCGTGTGA
GCACGAAAGAACAGCGGCTGAGGCGCACGAACGCATGGCGAGACGAGAAG
ACACGTAGCGTGCATGACGCCACATCGGCCAAGGAACGTTCACGCATACA
TGCATGCGATACACACCCGTTGGGGCGGCATCGCTGCTGCTGCGTAACGG
CGCACACATGGATGTACATCATTGCTACCCACCACCCGACTGATACGCAC
CACTAACTAATCGTAAATACGTAAATACCCTGTTTCGGACACCAGGCGTA
CGGCAAGATCAAGAGGGAAGAAGAAGAGAAACTGGCACACCCCCACCTAA
TCTGAAAAAAAAAACTCTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCGTTTTTTGGGTTGGTTTGGTTTGCTCCTTTTGGTT
TCCTCTCTCTGGCTTCCTCCTTGGTTGTGTTGGTGTGCGAGGGAGTAGGG
GGACATATATAGAAACCATGTGCTATATATAGATAGGGTCTCCGTGCTTT
GCGTGTGGCGAGGAAGTCAAACCATGCGCCTTATATATATAAGTGTCTCC
GTGCTTGTGGCCAAAAGCTAGATATATTGGCTGTCCGGACATACGGAGTA
CCGTACAAGTTGTAGGGTTATTTGTTTGTTGCATCAGGTCTCCCCGTCCG
CCCTCCCGCCCAACCCGCCCGCCGCAACGCTGCGCGTTGTTGTTTCTCTT
TTGGCGCATGGGTGACTGACTCACTACGTACATGGCCGCTCCCACTTTGT
TTTCCTCTTTGTTAGGTATATTTATTGGTTGCCGTCCTAATTTGTTTTTG
GGGAGGGGGGGCGGGGGAGGGAGAGAATTCGAACATAATCAGCTGCGCTC
TCGCCCCTACGTCTCTCTCTCTCTCTCTTTCTCTCCGCGTTTTTCCCTCG
ATCGCGGCCACACCGGCACGACCAACGAAGCAGCCGCCCGGGCTGCAGAA
GCAGCGGGTTCGATAGGCGCGATCGTTCCGCCGCCGCAGCCACGTAGCCC
CCTCCAGCAGGAAAACGCCTGGCGGGCCGCGTCGCCATCGTCAACATCTG
CGGCGGGTGGGGCTGGTGGGGACGGTGCAGCGGCAACGGCGACATCCCCG
CTCTTGGGGCAGCAAGGGCAGCAGCTGCGGCAAGGAGGGGGGCCGCCGGG
GTACGCCACTGGCGAGGCCGGCGCGGCGGCGGTTTCTTCCGGAACAGAAA
TAGCGGACGACCACGCCGATGTGAGTGAAGCAAGGAGAATGAGAAACGTT
AAATATTTCAAAATGCCCAGGATAGATAACAAACCACGCGATTACAACGC
CACTACTGTGCGTACCCTCACAAAAGGTATACGACTGGAGTTAAAGGAGA
CAAAAAAAAGAAAAAGTTGTCTCTTCGGTGGTGGGGGGAGAGGGGGGTGG
GGAGAGAGGATTTTTGCGTATATTCACCGAGGCGTTTTGCGCAGCCGCTG
GGTGTGCCCCTCACCCGGCTGACACATCAAGGTAATCTAGCCTGCTAAAT
AGAATAGGTACAATACGGGAATAGCCGGCCGCGCCCGGGAGTACATATAT
ATATATATTTTTTTTGTCTAGCCGGCAGCAGGAGGCGGGGCTGCTTCCCA
TACATACAAACATACATGCATACATGCTTCTGTGCATGACGACGGGCGGA
AAGTGTCGTTTGACGTGTGTGCCTTGGGCGGTGCGGTGGGTGGCTCACGG
GATGGGGTGACCCGTCGTCGCTTTGTGTTTCTGGGCCGGGCGAGAGGGAG
TGAGGGTAGGCGGGGGCGTAAATCATGCAGCGAAGGTGGTGCAGGGGGGG
GCGGGGGGCGGGGGGGGGGGCAGGTGTGTGCTGCGACCAGCCTTCCTTGC
CTGTTTTTCTCTCTCTTGTCCAGTGAGTGCCGTTCTGTCTTGCGGGCTCT
TGTGGTGAAAACAACGCAATTGGCACTCCAATACTCTGTTGTAGCCAGGG
TAGTCGAAGGAAGGTGCTGTTGTTAGCATGCTTGCTCTCCATCTGGGTTT
CTCGAGTACGCTGGAGGTAAACCACTTTTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCAGACCGTTTTTTTTCAGGACTGAGATCTTCGTACAC
ATTTCGCCCTCCCTCTTCTCCTCCGTCTGGCTGGCTTTCCCCCCTCTCCC
TCTTTCTCCTTCCTTCCCTCCCTCCCCCCACCCCCCTCCCCCCCCCCCCT
GTCTCTTCTGCTCTGCGGGCGCATCAAAACTGCATTGCGTTGAACCGCAC
AAACAGTACATTCGGCTGAAACGGCAAGAGAGCGTCGAGCTGGGCCTTAG
CGCTGCGGCCGAGTTCTTCGGCACGGTGGATGAGGAGCTGCGCAAGGTGC
GGGCGCCCGCTGTACCCGTACCCGTACCCGTACCCGTAGCCGTAGCCGTA
GCCGCAGCCGTAGCCGCAGCCGTAGCCGCAGCCGTAGCCGCAGCCGTAGC
CGTAGCCATAGCCGTAGCCGCAGCCGTGGCTGTGGCTGTGGCTGTTGCTA
CGTCGTTCGGGATGGCTGCTGCCAAGAGCCCCAACGCACCCGGCTTCGTC
GGTCGTGTGGCCGTGCGACTGAGTCGGCGGGACAGGTCGCGGACGGGACA
CAATTCGCGCGCGAAAACCCGGTCTTGCCCCGCCGTTCATCTCCCGCCGC
AGTTAGCGCGCTGACTGATGGCTGTCACAAATCAGAGCCAATCAAGTCGC
CCGGCTGCCAGCTTTTCAGAGGAATGCGTGTGTGTGTGTACTATGTGTGT
ACTTCTATGTACAAAGTGTGCTATACAATAATCCGGAGTATTAGGGATGA
GGCGATACCACGCCGCCACCTCCCCCACCCCCCTCCCCAACCCTGCGGCG
CCACGGCCAACGAGTCTTCCTTGCCGCCGTCCGCCGCCGTGCGCGCGCGC
GGAACTTCTTAACAGGTGGAAGAGTTCTACAAGGGAAAATACGCGGAGCT
GGACCAGATCCTCGCAGGTTTTGAGGCCAGGTGGGCGAAGCGCGAAGCGG
TAATGGCTGACTGGACCGCAGGGGATTCGAGGCTCGGGAGTTCAGCCCCA
ATGCGGCGTGTTTGCCCGTAAAAGCTGGCTGTTTTTCGGGAGAGCAAATC
ACTAAATTGGCGTTGACGACGCCCGAGTGTGCTACCTATGACCTGCGTGC
GCATCGTAAGCGCCGAATAAGAGAGATGTGCTTTTATGTGTTCCATCACT
TGTACGTACGTACATGCGTAATTATGAAGTATGTTTTTTTTTTGTTTTCG
CCCATCATTGGCATATTTGTCGTCTGCCCCACTGGCCCCCTTCCTCCACT
ACGACTAGCTAGACGACCCAACCGGGGTCACACAGGAGGGGGGGGTTGGA
CCCCCTCCTGCGGTGCGCCTGCCTCAGATGTTTTTAACGCGAGCAGGGTT
CGCGTGTATATGTATGTATCGAATTCAATGCCCGGAAACGCTAAGCAGGG
ACCGGCCTCGTGTTTTTTGCCGTCGGCTGGTCTCGCCTGCGTTGCGTTTG
CTTGGCTGCGTACTTTTTTCCGGGCAAGAGCTGGAGAGCCTCGCCTCGCA
TGTCTTGTCACCGTGCCCCGAAACTCTGGCTGGTTTGTTTTGTATGTACA
TCCATCCATCCATACATACCCGCCTCTTTTGCGTGCCTCCTGTCACCCCC
GCCGCCGCCGTCCCAACCGGCCGCGCCCTGCCGCGCTTCGGCAGGGGAAA
CCTTCAAAACTCGTGGGCGGTCCCGTCGGGGAACACCCTGACTCCGCTCT
TCGGGGCCTACACGGAGATCACCGCCCTGGTGAAGTTTGTCGAGATGAAC
GGCGAAGGCTTCCGAAAGATCGTCAAGAAGTACGACAAGACCATGGGCAC
CGAGTTTCTCGAAAGGTGTGTTCTGCATGTATTTATACATTCATGTATGT
ATGTAGAAGCATATTGGTACGAAGTGTGTGTGTGTGTATGATAAACCATG
AACGAACGTGACAAGTGGGGGGCGTGGCCGGTTTTTTTTTTTCTGCTTTT
TTTTCTTTTGGGGGCCTCCTGTTTCTGTGGAAAACCCCCCCCCCCCCCCC
CCATATTCGTTTCGTTTCGTTCGGCGTCAACCACGCCCCGCCCCGCCCCG
CCCCACTCATCCCTCTTGAGGAGTCGTCTCTCGGAGTTTTTTGTGGCTCC
TGCATACTTGTGCTATTCAATGCTGGTGTAGATCGTCGTCTTCGTCTCTG
GGCATGCTTGGTTTCGTTTGTTTGTCTTCTGTGTGCCGGTCCGCCTCGCT
TGCACGCTTGCAACGAGAAGCGGCGGCGGCGGCGGGCGGGCGTAAGGTAC
AGTAGTAAGCCGGTCAGCTCCTGAAGGCGGCGCGATGTTCTTGCGTGTGC
GGGTTGCATGGCGTCCTTCCTCTGCGTGCATCTTCCCGCGGCGTTATTCG
TTGTGCGTGTGAGCCGTCTTACCTCCTTCCTCTGTGCTATTCTGCTGCAT
GTTGTCCCGGTGTGCTTAATTAAGTGTGTGTGTGTGTGTCTGTGTTTTGA
GGGGCGCTTTTTTGGAGCGAGGGGCGTAAAGTACCACCTTCAACGCATCA
TTGCTTCTCAGTCACGCAACGTCTCTTCGAGTATCCTACTGCTGTGGAGG
CACACACCCCACGTCCCTCCTTCCCCCCCGAAAAAGAGCTGATTTTGTCG
CTCACTATCAAATTCATTGTCGCGAGCAACCTCGCCCCGCCCCTCCGCCC
CTCCTCCCATTGTCGACCTCGTGCCACGACCGACCGCACCGACAGCTTTT
TGGAGAGGCTGCACAAGAACGAGTTCTACCAGTCCGAGGGAGCTGAGACA
TTGCTGGAACGAGTCCAAGGCAAGGAAGGAGGCGTGATCTTGGGCTGGTT
TTTGTTGGCGGTGTTTTTTCGTGCGCGCATTGTAGTGCATGATACTGGCT
GCGCTTTTTTTGGCTTCAGGGGTCTCTGTTCTGTCGCACGCGGGGAGAGG
GCGATATTTGCTTTGGTGATCTGAATATCTGTCTTACCTACGAGATGAGC
TTGTGACGGTGTTTTTTTTTTTTTCTCTTTTTCACTCCTCTCCGCGTTGC
TCGCGAGGCTCCTTTGCTCCATTCGGAGGCGGTGAACTCACCCACCCACT
CACCCACCCCACATGGTGGTTTGGCAGCTCCACGCCCTCCCCCGCCTCCC
CGCCCGATCTCGCCGTCTTTTGTGCCTCTTGCCCTCGTCGCTTCACATTT
GTCACGCGAAAAACACACACCGTTTTTGTCTTGTCCCCATTTTCCTACAC
TCCGTTTTTTGTTTTTTTCTCTCCTCTTGTCCCCCGCGCCTCACCCTCTG
CCCGCTGTCTTTTTCAACCGGCCAGGCCTTGTCTCCCGCGATAAGCTCCT
GGACATGAAGCGGCACGCGGAGCTGGCGCACATGGACTCGTCCGAAAAGA
CGATCTTCCCCGCGGTCAAGTTCACCCCCCTCGTCTTCTCGGTTCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6938:1018..9364-

>mRNA_L-elsbetiae_contig6938.15709.1 ID=mRNA_L-elsbetiae_contig6938.15709.1|Name=mRNA_L-elsbetiae_contig6938.15709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig6938:1018..9364- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGGCGAAGGCTTCCGAAAGATCGTCAAGAAGTACGACAAGACCAT
GGGCACCGAGTTTCTCGAAAGATGAACGGCGAAGGCTTCCGAAAGATCGT
CAAGAAGTACGACAAGACCATGGGCACCGAGTTTCTCGAAAGCTTTTTGG
AGAGGCTGCACAAGAACGAGTTCTACCAGTCCGAGGGAGCTGAGACATTG
CTGGAACGAGTCCAAGCTTTTTGGAGAGGCTGCACAAGAACGAGTTCTAC
CAGTCCGAGGGAGCTGAGACATTGCTGGAACGAGTCCAAGGCCTTGTCTC
CCGCGATAAGCTCCTGGACATGAAGCGGCACGCGGAGCTGGCGCACATGG
ACTCGTCCGAAAAGACGATCTTCCCCGCGGTCAAGTTCACCCCCCTCGTC
TTCTCGGTTCTGGCCTTGTCTCCCGCGATAAGCTCCTGGACATGAAGCGG
CACGCGGAGCTGGCGCACATGGACTCGTCCGAAAAGACGATCTTCCCCGC
GGTCAAGTTCACCCCCCTCGTCTTCTCGGTTCTG
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