mRNA_L-elsbetiae_contig6937.15708.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6937.15708.1
Unique NamemRNA_L-elsbetiae_contig6937.15708.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 2.120e-160
Identity = 236/265 (89.06%), Postives = 252/265 (95.09%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            FSSVV+PIYLGELAPPTLRGTLGTMTQFALV GILGSNLLAFPLATP GWRWMFAVTP LALVEL+C+P I ES RWLLA+D+YSMEARLAI KLRGL  D D+QIEIDHILEA SAQRT+HTSAHSRGAVLDLF DKRQRLLV+SF+ILHAAQQLTGINA+FYYSNSFFVGIIDNPL+GTTLVGVVNVVATYVALQLMDKTGRVPL+MWSAGGML STVVVTLSLLG+LPNV+AVFGVMAFV+FFE+GLGPIPWLIVAEMFDAK
Sbjct:  208 FSSVVVPIYLGELAPPTLRGTLGTMTQFALVIGILGSNLLAFPLATPSGWRWMFAVTPFLALVELVCIPFILESLRWLLAKDQYSMEARLAIGKLRGLTDDNDIQIEIDHILEASSAQRTSHTSAHSRGAVLDLFMDKRQRLLVVSFLILHAAQQLTGINAVFYYSNSFFVGIIDNPLIGTTLVGVVNVVATYVALQLMDKTGRVPLMMWSAGGMLASTVVVTLSLLGMLPNVIAVFGVMAFVTFFEMGLGPIPWLIVAEMFDAK 472          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.540e-111
Identity = 172/266 (64.66%), Postives = 212/266 (79.70%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN-HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            ++SV++PIYLGELAPPTLRGTLGT+TQF++V GIL SNLL+FPLA   GWR +  VT +L+L +LM  P I ESPRWLL++DEYS++A + + +LRG   D +VQ E+DHI++A   QR    +SAH  GAV DL TD R RLLVISF +LH AQQL+GINA+FYYS SFF GI+ +PLVGT   G VNV+ATY AL+LMD+ GRV L++WS+GGM +S + +T SLLG+ PN VA+ GVMAFVSFFEIGLGPIPWLIVAEMFDAK
Sbjct:  215 YASVIVPIYLGELAPPTLRGTLGTLTQFSMVIGILASNLLSFPLADESGWRMLLGVTAVLSLCQLMASPFIVESPRWLLSKDEYSIQASMLLKQLRGFRSDTEVQKEVDHIVQASRVQRLEGQSSAHGSGAVWDLITDPRVRLLVISFTVLHMAQQLSGINAVFYYSTSFFDGIVADPLVGTAAAGTVNVLATYAALKLMDRCGRVTLLLWSSGGMFLSCIAITASLLGIAPNYVALLGVMAFVSFFEIGLGPIPWLIVAEMFDAK 480          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC)

HSP 1 Score: 320 bits (820), Expect = 1.060e-102
Identity = 163/265 (61.51%), Postives = 210/265 (79.25%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            F+SV++PIYLGELAPPTLRGTLGT+TQF+LV+GIL S++LA+PLAT  GWR++FAVT +LA ++L+C P + ESPRWLLARDE S +AR+ + KLRG    ++V++E++H++ A    +T H SAHS  A+ DLF D   RLL+IS ++L  +QQL GINA+FYYS  FF G+I +PL GT LV  VNV+ATYVAL+LMD  GR  L++WSA GML S V+VT++L  ++P+VVA+ GVM FV FFEIGLGPIPWLIVAEMFD K
Sbjct:  215 FASVLVPIYLGELAPPTLRGTLGTLTQFSLVTGILVSDVLAYPLATAQGWRFLFAVTALLACLQLLCSPFLLESPRWLLARDEKSRDARVIMKKLRGFREAKEVEMEVEHMMMASRRAKTPHNSAHSASALYDLFRDPSVRLLLISCLVLQISQQLCGINAVFYYSTMFFQGLIADPLEGTILVASVNVIATYVALKLMDTCGRRTLVLWSASGMLFSCVMVTMALYHVVPDVVALLGVMLFVFFFEIGLGPIPWLIVAEMFDQK 479          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2S8N5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8N5_9STRA)

HSP 1 Score: 310 bits (794), Expect = 5.130e-101
Identity = 160/271 (59.04%), Postives = 202/271 (74.54%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN------HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            FSSV++PIYLGELAPPTLRGTLGT+TQF+LV GIL SNLLAFP ATP  WR +F+VT I+A V+L+C P + ESPRWLL RD  S +AR  I KLRGL +D +V+ E+ H + A   Q+T+         +   G  +++F D+  RLLV+S ++L   QQL GINA+FYYS +FF G+I NPLVGTT+VGVVNVVATY+AL LMDK GR  LI+WS+GGM +  +++ ++LLG   + VA+  V  +V FFEIGLGPIPWLIVAEMFDAK
Sbjct:   38 FSSVLVPIYLGELAPPTLRGTLGTLTQFSLVIGILVSNLLAFPFATPDSWRILFSVTSIVAFVQLLCAPFLLESPRWLLNRDCKSQKARYIIKKLRGLRYDHEVETEVSHFISASKVQQTDVELLKDEGKSSGGGPFMEMFRDESVRLLVVSALVLQMGQQLCGINAVFYYSTTFFEGVIPNPLVGTTIVGVVNVVATYIALLLMDKCGRRTLILWSSGGMFICCIILVVALLGYFSHFVALLAVNLYVFFFEIGLGPIPWLIVAEMFDAK 308          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2UII2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII2_9STRA)

HSP 1 Score: 312 bits (799), Expect = 5.250e-101
Identity = 161/272 (59.19%), Postives = 203/272 (74.63%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQR-------TNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            F+SV++PIYLGELAPPTLRG LGT+TQFA+V GIL S+LLAFP AT   WR++FAVT I+A ++++C P + ESPRWLL RD  S +AR  I KLRGL +D +V+ E+ H + A   Q+       +N     S+G  ++LFTDK+ R+LV+S ++L  AQQL GINA+FYYS  FF G+I NPLVGTT+VG VNVVATYVAL LMD  GR  LI+WS+GGM +  +++ LSLLG   + VA+  V  +VSFFEIGLGPIPWLIVAEMFDAK
Sbjct:   66 FASVLVPIYLGELAPPTLRGMLGTLTQFAMVIGILVSDLLAFPFATEDKWRYLFAVTAIVAALQILCAPFLLESPRWLLNRDPSSRKARYLIKKLRGLRYDHEVETEVGHFISASKVQQMDPVSETSNPREQASKGPFMELFTDKKVRMLVVSSLVLQMAQQLCGINAVFYYSTMFFEGVISNPLVGTTVVGAVNVVATYVALMLMDSCGRRTLILWSSGGMFICCIMIVLSLLGFFNHFVALLAVNLYVSFFEIGLGPIPWLIVAEMFDAK 337          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA)

HSP 1 Score: 310 bits (795), Expect = 3.750e-100
Identity = 163/266 (61.28%), Postives = 201/266 (75.56%), Query Frame = 1
Query:    4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAH--SRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            SSV++PIYLGELAPPTLRGTLGTMTQFALV GIL SNLL FP AT   WR++FAVTP  ALV+L+  P + ESPRWLL RD  S +AR  I K+RGL +D +V+ E  H + A + Q+ + TS    S+ AV ++F D++ RLLV+S ++L  +QQL GINA+FYYSN FF G+IDNPLVGTT+VG VNV ATYVAL LMD  GR  LIMWS+G M +S +++ LSLL    ++VA+  V  +V FFEIG+GPIPWLIVAEMFDAK
Sbjct:  110 SSVLVPIYLGELAPPTLRGTLGTMTQFALVIGILVSNLLGFPFATEDRWRFLFAVTPFFALVQLLLSPFLLESPRWLLGRDPNSRKARFIIKKIRGLRYDHEVETEAGHFVAAAAVQKPSETSEKVGSQSAVSEMFADRKIRLLVVSAIVLQVSQQLCGINAVFYYSNMFFEGVIDNPLVGTTVVGAVNVAATYVALLLMDSCGRRTLIMWSSGIMFLSCIIIVLSLLEYFGHMVALLFVNVYVIFFEIGMGPIPWLIVAEMFDAK 375          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S1XZ20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ20_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.460e-99
Identity = 162/266 (60.90%), Postives = 203/266 (76.32%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGG-WRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            F+SVVIP+YLGE+APPT+RG LGT TQFA+V GIL ++LLAFPLA PG  WR +  VTP+LA V+++  PL+ ESPRW L+RD    +AR  + KLRG     +++ E+DHILEA     T HTSAHS GA+ DL TD+  R+LV+S V LH +QQL GINA+FYYSN FF GII+NPLV TTL   VNV+ATYVAL+LMD  GR  LI+WS  GML+ T+++TL+L GL+P  VA+ GV+A+VSFFEIGLGP+ WL  AE+FDAK
Sbjct:  139 FASVVIPVYLGEIAPPTMRGALGTCTQFAMVIGILVADLLAFPLAKPGMFWRMLLGVTPVLAAVQILLAPLLVESPRWRLSRDPNCKKARRDLYKLRGFRTHAELEHEVDHILEASRTALTRHTSAHSGGAMWDLLTDRDVRVLVLSAVFLHVSQQLCGINAVFYYSNMFFDGIIENPLVATTLTAFVNVLATYVALRLMDICGRRTLILWSCMGMLIGTMLITLALHGLVPKYVALLGVLAYVSFFEIGLGPVAWLFPAEVFDAK 404          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S1BUZ7_9STRA (Hypothetical protein n=5 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUZ7_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.690e-98
Identity = 161/265 (60.75%), Postives = 205/265 (77.36%), Query Frame = 1
Query:    4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPG-GWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            ++V++PIYLGELAPPTLRGTLGTMTQFA V GIL S LLAFP  TP  GWR++FAVTP+++L+++ C   + ESPRW+L+RD  S++AR  I KLRGL  D +V+ E++  L A + Q  ++ + ++  AV+ +F D R R L ++ V+L  AQQL GINA+FYYS +FF GIIDNPLVGTT +  VNVVATYVAL LMD  GR  LI+WS+GGML+S +V+ L+LLG +PNVVA+  V  +VSFFEIGLGPIPWLIVAEMFDAK
Sbjct:  201 ATVLVPIYLGELAPPTLRGTLGTMTQFATVIGILASALLAFPFGTPDPGWRYLFAVTPVVSLMQIACGSFLLESPRWILSRDPQSLKARSIIKKLRGLRFDYEVETEVELFLSAAAVQ--DNEAENNGSAVVQMFQDLRVRHLAVAAVLLQMAQQLCGINAVFYYSTAFFEGIIDNPLVGTTTICAVNVVATYVALLLMDSCGRRVLILWSSGGMLISVIVIVLALLGYMPNVVALIAVNVYVSFFEIGLGPIPWLIVAEMFDAK 463          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2S0R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0R8_9STRA)

HSP 1 Score: 297 bits (761), Expect = 9.390e-97
Identity = 150/265 (56.60%), Postives = 201/265 (75.85%), Query Frame = 1
Query:    1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            FSSV++P+YLGE+APP LRGT GT TQF++V GIL S + AFPLAT  GWR++  +T +LA+++L   P + ESPRWLL+R  Y+  A + + KL GL  DE V  EI ++ +A    RT H SAHS GA++DLF D R RLL+I  V++H +QQL GINA+FYYS SFF G+IDNPL+GT +V  VNV AT++A  LMD+  R  L++WSAGGM++S V++T +L+ ++PN +A+  V+++V+FFEIGLGPIPWLIVAEMFDAK
Sbjct:    1 FSSVLVPVYLGEVAPPILRGTFGTCTQFSMVIGILMSGVFAFPLATASGWRFLMGITAVLAVLQLALSPYLLESPRWLLSRG-YTQRAGVVLKKLMGLRDDEHVAAEIQNLQDAHEMTRTRHKSAHSGGAIMDLFYDDRVRLLLICCVVMHISQQLCGINAVFYYSTSFFNGVIDNPLLGTVIVAAVNVAATWLAQILMDRCFRRTLLLWSAGGMILSLVILTAALMQVVPNYMALVSVISYVAFFEIGLGPIPWLIVAEMFDAK 264          
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S3PYK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYK8_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.900e-93
Identity = 155/275 (56.36%), Postives = 200/275 (72.73%), Query Frame = 1
Query:    4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN-----------HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795
            S+V++PIYLGELAPPTLRGTLGTMTQFA+V GIL ++L+AFP AT   WR +F+V  ++A ++L+C P + ESPRWLL++   S +AR  I KLRGL +D +V  E+DH L A++ Q  N           +T   + G  +D+  D++ RLLV+S  +L A QQL+GINA+FYYS SFF G+I NP++GTTLVG VNV+ATY AL LMD  GR  LI+WS GGML+S +V+ LSL+G   N+ A+  V  +V FFEIGLGPIPWLIVAEMFDAK
Sbjct:  165 STVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPRWLLSKKPGSRKARYIIKKLRGLRYDHEVDTEVDHFLGAVNVQNVNDYDDEIGNENRNTDMKTIG-FMDMLMDEKVRLLVVSSFVLQAVQQLSGINAVFYYSTSFFDGVIANPMIGTTLVGAVNVLATYAALLLMDSFGRRTLILWSCGGMLISCIVIVLSLMGKFSNITALVAVNTYVMFFEIGLGPIPWLIVAEMFDAK 438          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G798_ECTSI2.120e-16089.06MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZG82_9STRA1.540e-11164.66Solute carrier family facilitated glucose transpor... [more]
I2CP18_NANGC1.060e-10261.51Solute carrier family facilitated glucose transpor... [more]
A0A7S2S8N5_9STRA5.130e-10159.04Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2UII2_9STRA5.250e-10159.19Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4J4S9_9STRA3.750e-10061.28Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S1XZ20_9STRA2.460e-9960.90Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1BUZ7_9STRA3.690e-9860.75Hypothetical protein n=5 Tax=Corethron hystrix Tax... [more]
A0A7S2S0R8_9STRA9.390e-9756.60Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PYK8_9STRA1.900e-9356.36Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6937contigL-elsbetiae_contig6937:111..3030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.2
Seed ortholog evalue4.2e-128
Seed eggNOG ortholog2880.D7G798
KEGG koko:K08142
KEGG TC2.A.1.1.12
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transmembrane transporter activity
EggNOG OGsCOG0477@1,KOG0569@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size798
Cds size798
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6937.15708.1prot_L-elsbetiae_contig6937.15708.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6937 111..3030 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816769.1670666-CDS-L-elsbetiae_contig6937:110..3371622816769.1670666-CDS-L-elsbetiae_contig6937:110..337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 111..337 +
1691683799.3232796-CDS-L-elsbetiae_contig6937:110..3371691683799.3232796-CDS-L-elsbetiae_contig6937:110..337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 111..337 +
1622816769.1802793-CDS-L-elsbetiae_contig6937:676..7641622816769.1802793-CDS-L-elsbetiae_contig6937:676..764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 677..764 +
1691683799.338264-CDS-L-elsbetiae_contig6937:676..7641691683799.338264-CDS-L-elsbetiae_contig6937:676..764Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 677..764 +
1622816769.1901724-CDS-L-elsbetiae_contig6937:1365..14671622816769.1901724-CDS-L-elsbetiae_contig6937:1365..1467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 1366..1467 +
1691683799.3479366-CDS-L-elsbetiae_contig6937:1365..14671691683799.3479366-CDS-L-elsbetiae_contig6937:1365..1467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 1366..1467 +
1622816769.2003791-CDS-L-elsbetiae_contig6937:2004..21991622816769.2003791-CDS-L-elsbetiae_contig6937:2004..2199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 2005..2199 +
1691683799.3588028-CDS-L-elsbetiae_contig6937:2004..21991691683799.3588028-CDS-L-elsbetiae_contig6937:2004..2199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 2005..2199 +
1622816769.211213-CDS-L-elsbetiae_contig6937:2844..30301622816769.211213-CDS-L-elsbetiae_contig6937:2844..3030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 2845..3030 +
1691683799.3717058-CDS-L-elsbetiae_contig6937:2844..30301691683799.3717058-CDS-L-elsbetiae_contig6937:2844..3030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6937 2845..3030 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6937.15708.1

>prot_L-elsbetiae_contig6937.15708.1 ID=prot_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGW
RWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVH
DEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVIL
HAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMD
KTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGL
GPIPWLIVAEMFDAK*
back to top

mRNA from alignment at L-elsbetiae_contig6937:111..3030+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6937.15708.1 ID=mRNA_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2920bp|location=Sequence derived from alignment at L-elsbetiae_contig6937:111..3030+ (Laminarionema elsbetiae ELsaHSoW15)
TTTTCGTCCGTGGTGATCCCCATCTACCTCGGAGAGCTCGCGCCGCCGAC GCTGCGCGGTACCCTCGGGACGATGACGCAATTCGCCCTCGTGAGCGGCA TCCTGGGGTCGAACCTCCTGGCGTTCCCGCTGGCCACGCCGGGCGGCTGG CGGTGGATGTTCGCCGTCACGCCGATCCTCGCCCTGGTGGAGCTGATGTG CATGCCCCTCATTTTCGAAAGCCCTAGGTGCGCGCGGAGGGAGGGTGGGC GGTCCGGGGGGGGGAGGGGGCTAGACCGATGGGAATTGGCCCAGGGTCGC ACGACGGGGGGGTGTTTTGGGGGCTGGGGGGGGGGGGGGGGGGGTCGGCT TCGGACGGGATGTGGGCGCCGCTGTCAAGTGCTCGTCGTCCGGTGCTCTT TTTGTTTTTACTCTTAGGAAGGAGTATGCCACTTGTAGTCATTTTTGGAG GTATAAATAGAAATATACCTACATATGTGTTACAGGACGTTGTAGTGGTT TATTTAGGGGCAAACGCGAAACTTTATGTATGAACTCCCACATAACACGC GCGCGCGCGATCTCAGGTGGCTCCTGGCGAGAGACGAGTACTCGATGGAG GCAAGGCTTGCCATCAGCAAGCTCAGGGGGTTGGTGCACGATGAAGACGT TCAGGTAAGTGCGGTGTCGCGTCTGTCTGTCTGTCTGTCTGTCTGTCGGC CGATCATGCAATCAATTGGGAGGGAGGCGGAGCGGGAGCGGGTTTTTCCC TCAACAGACGGGAGAGCAGAAGCACCCGACTGCCGCTCGCTCACTGACCA CAGTAGTCTATCTCGAGGCATTCTTGGCCAGCTTTGGTCTCCGTCGTTTT ATGGCATGAATTATTCTCACTCATGGTGGCGATCCTTCTCTCATTTTCAT GTTTTAGTGTAATACCCGGGTATGTTTGTTGCCGCTCATCTCGCTGGTTA CTCTGGTAGGTTGTTGCGCCCCGGGTGGTCAGCTACACAGCTAGCTAGCT CTCTCAGTTTCACGGCTTGTTTTGGGCGCGATACATTGATGCCCCACCTC CCGGTGTAACTCATGGATGATGTGTGCCGTCCTCACGCCGCCGGGAGGGT TGCGATCTGTTCTTGTTGGGGTCTGACGAACAACTGCGGCCCCGTGAGTG TGTTTGATAAAACCATTACCCCCCCCCCCGCTATTTTGTTCGCCCCATCT ATGTACGGCTCCTCTTTGGATGGTCTTGTTTTTTTGTCTTGTGTTGCGAG ATCAGATCGAGATCGACCACATCCTAGAGGCCATGAGCGCGCAGAGAACG AACCACACCAGTGCGCACTCCAGGGGCGCCGTGCTTGACCTCTTCACCGA CAAGCGGGTGAGGGGGCCAGGGGGCGAGAAGAGAACGCCGCGGTACATAT GTTTAGGACAGGCCGCGGGTGTGTCGTAGCGTCGTTCCAGTGCAAAGCCC AGATTGATGTTATGTATTGTATTGTCTTCCAGCAGTGTAGGGGAAAGACC TAGTTCGAGGTTGACAGTGTGTCTTTTGCAGTGGTGAATGTATTTATTTT CCAGGAAGTTTCCAGGAAGTTTCCAGGAACGCCGGGCATCCAAGACTAGT CAAAATGTGTGCCCTTTCTTTAACAGTTTTCGACTAATGTAGAAGTTACC GGTGTAATACATCCTGAGAACAGCATTAATCTAACTGGACAACATCTGAC GTCTGCGGTTGGGCTTATCTTGTTGCTTGCCGTTTGTGCGCAGAATCCCC AACATAATATCGAGGTTCTCACGGTTTCGCTGTTCCTCCCTCGCGTAACG CAACACACCTTGTTTTATTTTTGTGGTGCTCCACTCACATCTCTCTACCC CCCCCCCCGCGCGCGCGCTTCCCCGCTCTTTCCCCTGTGCACAGCAACGC CTTCTAGTGATTTCATTCGTGATCCTCCACGCGGCCCAGCAGCTTACGGG CATCAACGCCATCTTCTACTACTCGAACAGCTTCTTTGTGGGCATCATCG ACAACCCTCTGGTCGGGACGACGCTCGTGGGCGTGGTGAACGTGGTGGCG ACGTACGTGGCCCTGCAGCTCATGGACAAGACGGGGAGGGTGCGTCTCTC CATCCACCGCCCCCCCTCCCTCTTGCGTACTTTTGGGTTCTGATGCACTT CGTTTTTTAGTAGAAAATATCTTGACGATACTCGGGCAAGGGGTGCTCAC CCCTCTACCTATTTTGCATTTTTGCCTCGACGTTCATTTGGAGAGGTTCT TCTCCTGGGGCTTGGGCTACGTCAACCTTTCTTCAGTATCGTCATATTTA TCGTCATATTCATGCCTTTGTTTTTTTCTGGGAATATTAAAATCTCTTGG TGTTTGATGTTCACTCAATCTGCGCCGACCATGTCACCCGGAAATACTGC CGCCGTGTGTCGCGGACGTAACCTCAGTGCTGCTGCTGTTTACAGATGTG TCTCGCGTAGTTTAGTATGTACATCGGTACCTCAAACGCTCACGACTTAT CTACCGCCCAAAAAAACTCTCCCCACCCCCATTATCGCTTCACTGTCGAA GCGGCTTGAATCCGCAATTGGCTGGACCCCCTCATCATTTAGTGAAGAAT CAAGCGTTTTCCCCGTTAAACATGTTGTTCCATCTCTTTTTCTCTCTCTC CACATTTTCCCCCGTCGCGATGGGTGACCTTTTTCTTGTTCGATTTATTC ACTATTTACTGCTAATGTTGTCAATAAAAAAAAGGTTCCCCTGATCATGT GGAGCGCGGGAGGCATGCTCGTGTCGACCGTGGTCGTGACCCTCTCGCTG CTGGGGCTGCTGCCCAACGTCGTGGCGGTGTTCGGGGTGATGGCCTTCGT GTCCTTCTTCGAGATTGGCCTCGGGCCCATCCCCTGGCTCATCGTCGCCG AGATGTTCGACGCAAAGTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6937:111..3030+

>mRNA_L-elsbetiae_contig6937.15708.1 ID=mRNA_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig6937:111..3030+ (Laminarionema elsbetiae ELsaHSoW15)
TTTTCGTCCGTGGTGATCCCCATCTACCTCGGAGAGCTCGCGCCGCCGAC
GCTGCGCGGTACCCTCGGGACGATGACGCAATTCGCCCTCGTGAGCGGCA
TCCTGGGGTCGAACCTCCTGGCGTTCCCGCTGGCCACGCCGGGCGGCTGG
CGGTGGATGTTCGCCGTCACGCCGATCCTCGCCCTGGTGGAGCTGATGTG
CATGCCCCTCATTTTCGAAAGCCCTAGTTTTCGTCCGTGGTGATCCCCAT
CTACCTCGGAGAGCTCGCGCCGCCGACGCTGCGCGGTACCCTCGGGACGA
TGACGCAATTCGCCCTCGTGAGCGGCATCCTGGGGTCGAACCTCCTGGCG
TTCCCGCTGGCCACGCCGGGCGGCTGGCGGTGGATGTTCGCCGTCACGCC
GATCCTCGCCCTGGTGGAGCTGATGTGCATGCCCCTCATTTTCGAAAGCC
CTAGGTGGCTCCTGGCGAGAGACGAGTACTCGATGGAGGCAAGGCTTGCC
ATCAGCAAGCTCAGGGGGTTGGTGCACGATGAAGACGTTCAGGTGGCTCC
TGGCGAGAGACGAGTACTCGATGGAGGCAAGGCTTGCCATCAGCAAGCTC
AGGGGGTTGGTGCACGATGAAGACGTTCAGATCGAGATCGACCACATCCT
AGAGGCCATGAGCGCGCAGAGAACGAACCACACCAGTGCGCACTCCAGGG
GCGCCGTGCTTGACCTCTTCACCGACAAGCGGATCGAGATCGACCACATC
CTAGAGGCCATGAGCGCGCAGAGAACGAACCACACCAGTGCGCACTCCAG
GGGCGCCGTGCTTGACCTCTTCACCGACAAGCGGCAACGCCTTCTAGTGA
TTTCATTCGTGATCCTCCACGCGGCCCAGCAGCTTACGGGCATCAACGCC
ATCTTCTACTACTCGAACAGCTTCTTTGTGGGCATCATCGACAACCCTCT
GGTCGGGACGACGCTCGTGGGCGTGGTGAACGTGGTGGCGACGTACGTGG
CCCTGCAGCTCATGGACAAGACGGGGAGGCAACGCCTTCTAGTGATTTCA
TTCGTGATCCTCCACGCGGCCCAGCAGCTTACGGGCATCAACGCCATCTT
CTACTACTCGAACAGCTTCTTTGTGGGCATCATCGACAACCCTCTGGTCG
GGACGACGCTCGTGGGCGTGGTGAACGTGGTGGCGACGTACGTGGCCCTG
CAGCTCATGGACAAGACGGGGAGGGTTCCCCTGATCATGTGGAGCGCGGG
AGGCATGCTCGTGTCGACCGTGGTCGTGACCCTCTCGCTGCTGGGGCTGC
TGCCCAACGTCGTGGCGGTGTTCGGGGTGATGGCCTTCGTGTCCTTCTTC
GAGATTGGCCTCGGGCCCATCCCCTGGCTCATCGTCGCCGAGATGTTCGA
CGCAAAGTAAGTTCCCCTGATCATGTGGAGCGCGGGAGGCATGCTCGTGT
CGACCGTGGTCGTGACCCTCTCGCTGCTGGGGCTGCTGCCCAACGTCGTG
GCGGTGTTCGGGGTGATGGCCTTCGTGTCCTTCTTCGAGATTGGCCTCGG
GCCCATCCCCTGGCTCATCGTCGCCGAGATGTTCGACGCAAAGTAA
back to top