mRNA_L-elsbetiae_contig6930.15705.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6930.15705.1
Unique NamemRNA_L-elsbetiae_contig6930.15705.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6930.15705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6930contigL-elsbetiae_contig6930:1804..4619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size2553
Cds size2220
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6930.15705.1prot_L-elsbetiae_contig6930.15705.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6930 2110..4592 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.945671-UTR-L-elsbetiae_contig6930:1803..21091622816768.945671-UTR-L-elsbetiae_contig6930:1803..2109Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6930 1804..2109 -
1691683799.1285007-UTR-L-elsbetiae_contig6930:1803..21091691683799.1285007-UTR-L-elsbetiae_contig6930:1803..2109Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6930 1804..2109 -
1622816768.9785728-UTR-L-elsbetiae_contig6930:4592..46191622816768.9785728-UTR-L-elsbetiae_contig6930:4592..4619Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6930 4593..4619 -
1691683799.1637871-UTR-L-elsbetiae_contig6930:4592..46191691683799.1637871-UTR-L-elsbetiae_contig6930:4592..4619Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6930 4593..4619 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.9583516-CDS-L-elsbetiae_contig6930:2109..34271622816768.9583516-CDS-L-elsbetiae_contig6930:2109..3427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6930 2110..3427 -
1691683799.142294-CDS-L-elsbetiae_contig6930:2109..34271691683799.142294-CDS-L-elsbetiae_contig6930:2109..3427Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6930 2110..3427 -
1622816768.96857-CDS-L-elsbetiae_contig6930:3690..45921622816768.96857-CDS-L-elsbetiae_contig6930:3690..4592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6930 3691..4592 -
1691683799.1533248-CDS-L-elsbetiae_contig6930:3690..45921691683799.1533248-CDS-L-elsbetiae_contig6930:3690..4592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6930 3691..4592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6930.15705.1

>prot_L-elsbetiae_contig6930.15705.1 ID=prot_L-elsbetiae_contig6930.15705.1|Name=mRNA_L-elsbetiae_contig6930.15705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=740bp
MAWGQAALVRAPRRLSRSSAWGALFSTGFFPQVAGRGGAGSQNTLEETPW
PVVANQLRRRRQRQQHQQHHREVDDDGEMASVPPRAIGQRRGAEFSWAMG
PELTGGGSKETLYLRRMKLAHFRNDYQEAARLLSEMEGAGVYIDGRMYHL
TLGVFSSCKRWRDVLDVFDKVKAAGLKPGLDAYNTAIMASANCKDSDRAE
EMLRELPAAGLTPALPTYTALLLAYRHQGRWEDAISLFDEMVAAGITPDE
RAYRTAIDACGIGHQWEKCVRLFREMAAVGISPGVLSYRALVAACKKCGQ
WEFAVAVLKEMHVTEGVGPDLVAYQDAIEACCAALEWEIAFGLLQEMPMS
PGPCSFACCIKACSAVGQFEVAVGLIREMSRAGFRPGVANFNTVLKGCSK
KKQWKIAAGLLREMAQLAVPPLASSYTAAIEACGATGAGVGAGRGGFEQA
VALLREMRGGGGVSPERRTYNAAITCFGSHHEWESAVGVLREMAGDGFAP
DVIAYRYAVDACRKSQQGEKALELLREAEENRLPPDLRTFNHVIASLPFE
RSVQLLLEMREVPGVKPDRRTYNAVLRVCRDCSQWKQAVLILREMAAVGV
PPDVASYTLAAEACERREWSLAVDLLREMQEAGLVPDRHAYVVIVSALGN
GGQREQALEVFREMKSAGLSPNVKCYNAALQALRSGRLGGEAVGLLKAMV
QEGVAPNEGTYGAMKRACEHQDKEWREAETLLKDSRAVG*
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mRNA from alignment at L-elsbetiae_contig6930:1804..4619-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6930.15705.1 ID=mRNA_L-elsbetiae_contig6930.15705.1|Name=mRNA_L-elsbetiae_contig6930.15705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2816bp|location=Sequence derived from alignment at L-elsbetiae_contig6930:1804..4619- (Laminarionema elsbetiae ELsaHSoW15)
AGACTGGTTCCGCTCTAAGGAGTGGATATGGCCTGGGGCCAAGCGGCCCT
TGTGCGGGCGCCCCGCCGACTCTCGCGTTCCTCTGCATGGGGGGCGTTAT
TCTCCACTGGTTTTTTCCCTCAAGTCGCCGGCAGAGGCGGAGCGGGCTCC
CAGAACACTTTAGAGGAAACACCCTGGCCGGTTGTGGCGAACCAGCTGCG
ACGGCGGCGGCAGCGCCAGCAGCACCAGCAGCACCACCGGGAGGTTGACG
ACGACGGCGAGATGGCAAGTGTGCCGCCCAGGGCGATCGGTCAGCGTCGA
GGGGCTGAGTTTTCGTGGGCAATGGGGCCAGAGCTGACCGGCGGGGGAAG
CAAGGAGACCCTGTACTTGAGGCGCATGAAGCTGGCACATTTCCGGAACG
ACTACCAAGAAGCGGCGCGGCTTCTGTCGGAAATGGAGGGGGCGGGCGTC
TACATCGATGGCCGAATGTACCACTTGACCCTCGGTGTGTTTTCCAGCTG
CAAGCGGTGGAGAGACGTCCTTGACGTCTTCGACAAGGTGAAGGCGGCCG
GGCTAAAACCGGGTCTGGACGCCTATAACACGGCCATCATGGCGTCCGCG
AATTGCAAAGACTCGGACAGAGCTGAGGAAATGCTGCGAGAGCTGCCGGC
GGCAGGGTTGACGCCAGCACTGCCCACGTACACTGCGTTACTGCTGGCGT
ACCGGCATCAAGGCCGGTGGGAGGATGCCATCTCTTTGTTTGACGAGATG
GTTGCGGCGGGGATCACACCAGATGAGCGGGCGTACCGAACGGCAATAGA
CGCTTGCGGCATTGGTCATCAGTGGGAGAAGTGCGTGCGGCTTTTTCGAG
AAATGGCCGCGGTTGGAATCTCACCGGGCGTTCTGAGTTACCGGGCTCTC
GTCGCGGCCTGTAAGAAATGCGGGCAGTGGTAAGCACCCCATACCTAGTC
TGGGCTTGAGTGTTGTGCTGTGAGGAACAACCCCTTTCTGTCTGTCGGTT
TTGCTGTCTTGCCATTGTGACGTTGAGAAAATCACGAAGAGTTGATGGCT
GTCGTGCCATTCTTGGGCCAGTGAGCTCTGGCCTTCGGATCGTGCTTCAT
CTTGACGCCGTGCTTACTGTCAACTGACTGACATCCCTCCTTTCCTTCTC
GACGGTTATTGTGTGTGCTCTTGTCTTGTCTTGTCTTGAAAGGGAGTTTG
CTGTCGCTGTTCTGAAGGAGATGCACGTGACAGAAGGAGTTGGTCCTGAC
CTCGTCGCGTACCAGGATGCCATCGAGGCCTGCTGCGCTGCTCTAGAGTG
GGAGATAGCCTTTGGGCTTCTGCAAGAGATGCCGATGAGTCCGGGACCGT
GCAGCTTCGCTTGCTGCATCAAGGCGTGCAGCGCCGTGGGCCAGTTCGAG
GTCGCGGTGGGGCTCATCAGGGAGATGTCGCGAGCGGGATTCCGCCCCGG
TGTAGCCAACTTCAACACTGTCCTCAAAGGATGCTCCAAGAAGAAGCAGT
GGAAGATTGCCGCCGGGCTGCTGAGGGAAATGGCGCAGCTAGCCGTGCCC
CCCCTCGCGTCCAGCTACACAGCCGCCATCGAGGCGTGCGGGGCTACCGG
CGCCGGTGTCGGCGCGGGGCGCGGTGGCTTCGAGCAAGCCGTGGCGCTTT
TGCGCGAGATGCGAGGAGGCGGAGGCGTCTCCCCGGAGCGGCGCACGTAC
AACGCCGCAATCACTTGCTTCGGCAGTCACCACGAATGGGAGTCGGCCGT
CGGCGTGCTGAGAGAGATGGCGGGTGACGGGTTCGCTCCCGACGTGATCG
CCTACAGGTACGCGGTGGATGCGTGCAGAAAGAGCCAGCAGGGGGAAAAG
GCGCTGGAGCTCCTCCGAGAGGCCGAGGAGAACAGGTTGCCCCCCGACCT
GCGTACCTTCAACCATGTCATCGCTTCGCTCCCGTTCGAGCGGTCCGTCC
AGCTGCTGCTTGAGATGCGGGAGGTCCCGGGCGTGAAGCCAGACCGGCGA
ACGTACAACGCCGTGCTGAGGGTGTGCCGGGACTGCTCTCAGTGGAAGCA
GGCAGTCCTCATCCTGCGAGAGATGGCGGCGGTGGGCGTCCCGCCCGACG
TCGCCAGCTACACGCTCGCCGCCGAGGCGTGCGAGAGGCGCGAGTGGTCG
CTTGCTGTCGACCTGCTGCGCGAGATGCAGGAGGCCGGGCTCGTCCCCGA
CCGCCACGCCTACGTCGTGATCGTTTCGGCCCTGGGTAACGGCGGTCAGC
GCGAGCAGGCGCTGGAGGTCTTCCGAGAGATGAAGAGCGCTGGGTTGAGC
CCTAACGTGAAATGCTACAATGCCGCGCTCCAGGCGCTACGCAGTGGTCG
CCTGGGTGGGGAAGCTGTTGGCCTGCTGAAGGCAATGGTGCAGGAAGGCG
TCGCTCCGAACGAGGGGACCTACGGGGCGATGAAAAGGGCGTGCGAGCAC
CAGGATAAAGAGTGGAGAGAGGCTGAGACGCTGCTGAAAGATTCGCGAGC
AGTAGGCTAGAATCTTTACAAGCATTTTAGTCGCTTTCGCAAGATCCCGT
TGTTGTACTGCTGTGTTCGGTCACAGATGTTTCTTGAAAAACCCTAGTTG
AATTTCAGTTTTTTTATATTCGCTCTTGTTTTTTAGCATGGGTCCCGGAA
CCATCATCTGCAAGTGCGGGGTTTTGATTTTACGAGGCCAGCTTTGTTGC
GGTCGGCCGTTTACATCACGAAGTTGTGTTGGCAGCACCGCTAGGTGCCG
TGCAACGACATCATAGAAGCTGACACGTGTCCACCGCGCGGCGACGAGGG
CGTATTTCGGTGTTCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6930:1804..4619-

>mRNA_L-elsbetiae_contig6930.15705.1 ID=mRNA_L-elsbetiae_contig6930.15705.1|Name=mRNA_L-elsbetiae_contig6930.15705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4440bp|location=Sequence derived from alignment at L-elsbetiae_contig6930:1804..4619- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTGGGGCCAAGCGGCCCTTGTGCGGGCGCCCCGCCGACTCTCGCG
TTCCTCTGCATGGGGGGCGTTATTCTCCACTGGTTTTTTCCCTCAAGTCG
CCGGCAGAGGCGGAGCGGGCTCCCAGAACACTTTAGAGGAAACACCCTGG
CCGGTTGTGGCGAACCAGCTGCGACGGCGGCGGCAGCGCCAGCAGCACCA
GCAGCACCACCGGGAGGTTGACGACGACGGCGAGATGGCAAGTGTGCCGC
CCAGGGCGATCGGTCAGCGTCGAGGGGCTGAGTTTTCGTGGGCAATGGGG
CCAGAGCTGACCGGCGGGGGAAGCAAGGAGACCCTGTACTTGAGGCGCAT
GAAGCTGGCACATTTCCGGAACGACTACCAAGAAGCGGCGCGGCTTCTGT
CGGAAATGGAGGGGGCGGGCGTCTACATCGATGGCCGAATGTACCACTTG
ACCCTCGGTGTGTTTTCCAGCTGCAAGCGGTGGAGAGACGTCCTTGACGT
CTTCGACAAGGTGAAGGCGGCCGGGCTAAAACCGGGTCTGGACGCCTATA
ACACGGCCATCATGGCGTCCGCGAATTGCAAAGACTCGGACAGAGCTGAG
GAAATGCTGCGAGAGCTGCCGGCGGCAGGGTTGACGCCAGCACTGCCCAC
GTACACTGCGTTACTGCTGGCGTACCGGCATCAAGGCCGGTGGGAGGATG
CCATCTCTTTGTTTGACGAGATGGTTGCGGCGGGGATCACACCAGATGAG
CGGGCGTACCGAACGGCAATAGACGCTTGCGGCATTGGTCATCAGTGGGA
GAAGTGCGTGCGGCTTTTTCGAGAAATGGCCGCGGTTGGAATCTCACCGG
GCGTTCTGAGTTACCGGGCTCTCGTCGCGGCCTGTAAGAAATGCGGGCAG
TGATGGCCTGGGGCCAAGCGGCCCTTGTGCGGGCGCCCCGCCGACTCTCG
CGTTCCTCTGCATGGGGGGCGTTATTCTCCACTGGTTTTTTCCCTCAAGT
CGCCGGCAGAGGCGGAGCGGGCTCCCAGAACACTTTAGAGGAAACACCCT
GGCCGGTTGTGGCGAACCAGCTGCGACGGCGGCGGCAGCGCCAGCAGCAC
CAGCAGCACCACCGGGAGGTTGACGACGACGGCGAGATGGCAAGTGTGCC
GCCCAGGGCGATCGGTCAGCGTCGAGGGGCTGAGTTTTCGTGGGCAATGG
GGCCAGAGCTGACCGGCGGGGGAAGCAAGGAGACCCTGTACTTGAGGCGC
ATGAAGCTGGCACATTTCCGGAACGACTACCAAGAAGCGGCGCGGCTTCT
GTCGGAAATGGAGGGGGCGGGCGTCTACATCGATGGCCGAATGTACCACT
TGACCCTCGGTGTGTTTTCCAGCTGCAAGCGGTGGAGAGACGTCCTTGAC
GTCTTCGACAAGGTGAAGGCGGCCGGGCTAAAACCGGGTCTGGACGCCTA
TAACACGGCCATCATGGCGTCCGCGAATTGCAAAGACTCGGACAGAGCTG
AGGAAATGCTGCGAGAGCTGCCGGCGGCAGGGTTGACGCCAGCACTGCCC
ACGTACACTGCGTTACTGCTGGCGTACCGGCATCAAGGCCGGTGGGAGGA
TGCCATCTCTTTGTTTGACGAGATGGTTGCGGCGGGGATCACACCAGATG
AGCGGGCGTACCGAACGGCAATAGACGCTTGCGGCATTGGTCATCAGTGG
GAGAAGTGCGTGCGGCTTTTTCGAGAAATGGCCGCGGTTGGAATCTCACC
GGGCGTTCTGAGTTACCGGGCTCTCGTCGCGGCCTGTAAGAAATGCGGGC
AGTGGGAGTTTGCTGTCGCTGTTCTGAAGGAGATGCACGTGACAGAAGGA
GTTGGTCCTGACCTCGTCGCGTACCAGGATGCCATCGAGGCCTGCTGCGC
TGCTCTAGAGTGGGAGATAGCCTTTGGGCTTCTGCAAGAGATGCCGATGA
GTCCGGGACCGTGCAGCTTCGCTTGCTGCATCAAGGCGTGCAGCGCCGTG
GGCCAGTTCGAGGTCGCGGTGGGGCTCATCAGGGAGATGTCGCGAGCGGG
ATTCCGCCCCGGTGTAGCCAACTTCAACACTGTCCTCAAAGGATGCTCCA
AGAAGAAGCAGTGGAAGATTGCCGCCGGGCTGCTGAGGGAAATGGCGCAG
CTAGCCGTGCCCCCCCTCGCGTCCAGCTACACAGCCGCCATCGAGGCGTG
CGGGGCTACCGGCGCCGGTGTCGGCGCGGGGCGCGGTGGCTTCGAGCAAG
CCGTGGCGCTTTTGCGCGAGATGCGAGGAGGCGGAGGCGTCTCCCCGGAG
CGGCGCACGTACAACGCCGCAATCACTTGCTTCGGCAGTCACCACGAATG
GGAGTCGGCCGTCGGCGTGCTGAGAGAGATGGCGGGTGACGGGTTCGCTC
CCGACGTGATCGCCTACAGGTACGCGGTGGATGCGTGCAGAAAGAGCCAG
CAGGGGGAAAAGGCGCTGGAGCTCCTCCGAGAGGCCGAGGAGAACAGGTT
GCCCCCCGACCTGCGTACCTTCAACCATGTCATCGCTTCGCTCCCGTTCG
AGCGGTCCGTCCAGCTGCTGCTTGAGATGCGGGAGGTCCCGGGCGTGAAG
CCAGACCGGCGAACGTACAACGCCGTGCTGAGGGTGTGCCGGGACTGCTC
TCAGTGGAAGCAGGCAGTCCTCATCCTGCGAGAGATGGCGGCGGTGGGCG
TCCCGCCCGACGTCGCCAGCTACACGCTCGCCGCCGAGGCGTGCGAGAGG
CGCGAGTGGTCGCTTGCTGTCGACCTGCTGCGCGAGATGCAGGAGGCCGG
GCTCGTCCCCGACCGCCACGCCTACGTCGTGATCGTTTCGGCCCTGGGTA
ACGGCGGTCAGCGCGAGCAGGCGCTGGAGGTCTTCCGAGAGATGAAGAGC
GCTGGGTTGAGCCCTAACGTGAAATGCTACAATGCCGCGCTCCAGGCGCT
ACGCAGTGGTCGCCTGGGTGGGGAAGCTGTTGGCCTGCTGAAGGCAATGG
TGCAGGAAGGCGTCGCTCCGAACGAGGGGACCTACGGGGCGATGAAAAGG
GCGTGCGAGCACCAGGATAAAGAGTGGAGAGAGGCTGAGACGCTGCTGAA
AGATTCGCGAGCAGTAGGCTAGGGAGTTTGCTGTCGCTGTTCTGAAGGAG
ATGCACGTGACAGAAGGAGTTGGTCCTGACCTCGTCGCGTACCAGGATGC
CATCGAGGCCTGCTGCGCTGCTCTAGAGTGGGAGATAGCCTTTGGGCTTC
TGCAAGAGATGCCGATGAGTCCGGGACCGTGCAGCTTCGCTTGCTGCATC
AAGGCGTGCAGCGCCGTGGGCCAGTTCGAGGTCGCGGTGGGGCTCATCAG
GGAGATGTCGCGAGCGGGATTCCGCCCCGGTGTAGCCAACTTCAACACTG
TCCTCAAAGGATGCTCCAAGAAGAAGCAGTGGAAGATTGCCGCCGGGCTG
CTGAGGGAAATGGCGCAGCTAGCCGTGCCCCCCCTCGCGTCCAGCTACAC
AGCCGCCATCGAGGCGTGCGGGGCTACCGGCGCCGGTGTCGGCGCGGGGC
GCGGTGGCTTCGAGCAAGCCGTGGCGCTTTTGCGCGAGATGCGAGGAGGC
GGAGGCGTCTCCCCGGAGCGGCGCACGTACAACGCCGCAATCACTTGCTT
CGGCAGTCACCACGAATGGGAGTCGGCCGTCGGCGTGCTGAGAGAGATGG
CGGGTGACGGGTTCGCTCCCGACGTGATCGCCTACAGGTACGCGGTGGAT
GCGTGCAGAAAGAGCCAGCAGGGGGAAAAGGCGCTGGAGCTCCTCCGAGA
GGCCGAGGAGAACAGGTTGCCCCCCGACCTGCGTACCTTCAACCATGTCA
TCGCTTCGCTCCCGTTCGAGCGGTCCGTCCAGCTGCTGCTTGAGATGCGG
GAGGTCCCGGGCGTGAAGCCAGACCGGCGAACGTACAACGCCGTGCTGAG
GGTGTGCCGGGACTGCTCTCAGTGGAAGCAGGCAGTCCTCATCCTGCGAG
AGATGGCGGCGGTGGGCGTCCCGCCCGACGTCGCCAGCTACACGCTCGCC
GCCGAGGCGTGCGAGAGGCGCGAGTGGTCGCTTGCTGTCGACCTGCTGCG
CGAGATGCAGGAGGCCGGGCTCGTCCCCGACCGCCACGCCTACGTCGTGA
TCGTTTCGGCCCTGGGTAACGGCGGTCAGCGCGAGCAGGCGCTGGAGGTC
TTCCGAGAGATGAAGAGCGCTGGGTTGAGCCCTAACGTGAAATGCTACAA
TGCCGCGCTCCAGGCGCTACGCAGTGGTCGCCTGGGTGGGGAAGCTGTTG
GCCTGCTGAAGGCAATGGTGCAGGAAGGCGTCGCTCCGAACGAGGGGACC
TACGGGGCGATGAAAAGGGCGTGCGAGCACCAGGATAAAGAGTGGAGAGA
GGCTGAGACGCTGCTGAAAGATTCGCGAGCAGTAGGCTAG
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