mRNA_L-elsbetiae_contig693.15703.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig693.15703.1
Unique Name	mRNA_L-elsbetiae_contig693.15703.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.000e-82
Identity = 270/524 (51.53%), Postives = 293/524 (55.92%), Query Frame = 1

Query:    1 LSRRGGWAEAVAEAAEAXXXXXXXXXXESIPPXPPEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAFLPEGAVVGGTDGVKNDGLSRTGGGSAAGNP--------------------GRRGGWESPSDSDHTAQDEXXXXXXXXXXXXXXXXXXXXXRA-----PSSYQAVPTSVSTPQNAXXXXXXXXXXXXXXXXXXXXXXXXPRDRLEQMIETTVG-GANSQWPLKRRPSKATSRT-RQPAH--------------QPQPSRRRRAPPDATAR-----------RRDHDDDAIDGGLVGLSAFSRKMARVGDDGGAAETAGRTDGIGGXXXXXXXXXXXXXLSHSSPAAQNTSLVAPFHGPLPSSFPFGSSSFDTLPVGPLPGGDARTADSTAEVKGDGRKNPLNEPLAAVE 1416
            L+R GGWAEAVAEAAEA            I P PPEV+VAW+ECEQLCSAISKNNETKRKISRRLRNN RQAERFKADL+GKITGEDRNQLM+LQYRIGKLELDNMELEQSRIVHESAMRGKDLTI+KLQLQLAVRDRTI+LQQSVL EHGLD N GFPG+V     GITDALDAFLPEG VVG TD V +        G    N                     GRRGGW S           XXXXXXXXXX                  PSS Q    SVS   + XXXXXXXXXXXXXXXXXXXXXX  PRDRLEQM+ETT+G     QWP KRRPSK  SRT RQ  H              QP+P   +                    + DHDDD+I+ GLV                                           +S   P A   S VAPFHGPLP S  FG SS   L V   P GD   A   +  + D R   LN+  A ++
Sbjct:  557 LTRHGGWAEAVAEAAEAAAAGGRGDGS-IISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQLQLAVRDRTIALQQSVLKEHGLD-NVGFPGSV-----GITDALDAFLPEGVVVGRTDSVGSTSFDDGDHGGDVHNGDDQXXXXXXXSGVLIPRCRNGRRGGWGSXXXXXXXXXXXXXXXXXXXXXAKKDGPAGIAVIESGNINPSSTQGGSASVSATDSXXXXXXXXXXXXXXXXXXXXXXXHQPRDRLEQMMETTLGRSTGQQWP-KRRPSKTMSRTTRQTTHPXXXXXXXXXXXXLQPKPKYPQTRSXXXXXXXXXXXXXXXHLQGDHDDDSIEDGLV-------------------------------------------VSSIIPDA--ASCVAPFHGPLPVSLAFGCSSDGLLAV---PAGDDAFAAKGSRAR-DERNLSLNDLAARLQ 1023

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A6H5L427_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L427_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 6.430e-77
Identity = 313/726 (43.11%), Postives = 357/726 (49.17%), Query Frame = 1

Query:    1 LSRRGGWAEAVAEAAEAXXXXXXXXXXESIPPXPPEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAFLPEGAVVGGTDGV--------KNDGLSRTGGGSAAGNPG------------RRGGW-ESPSDSDHTAQDEXXXXXXXXXXXXXXXXXXXXXRA----PSSYQAVPTSVSTPQNAXXXXXXXXXXXXXXXXXXXXXXXXPRDRLEQMIETTVG-GANSQWPLKRRPSKATSRTRQPAHQPQPSRRRRAPPDATAR-------------------------RRDHDDDAIDGGLVGLSAFSRKMARVGDDGGAAETAGRTDGIGGXXXXXXXXXXXXXLSHSSPAAQNTSLVAPFHGPLPSSFPFGSSSFDTLPVGPLPGGDARTADSTAEVKGDGRKNPLNEPLAAVEGISVRQHVQPGGKHDAPHDQNQT---NTEVAARSGNFGVKPAAVFPISTCGDSNGRGAASGSGADTGAALASGTGDDPAAGKNITAASSLVGGGGSRTDRGDGRAGKQPSQLTKQGLASAESTKAQAAVPTGRAAAGGYNMGVSGTGVALPWRNRRQAPTTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGVAGPNWGSD 2016
            L+R GGWAEAVAEAAEA            I P PPEV+VAW+ECEQLCSAISKNNETKRKISRRLRNN RQAERFKADL+GKITGEDRNQLM+LQYRIGKLELDNMELEQSRIVHESAMRGKDLTI+KLQL                                  QVGITDALDAFLPEG VVG T+ +         + G    G     G+ G            RRGGW  S SDS+   +                        +     SS Q    SV      XXXXXXXXXXXXXXXXXXXXXXX PRDRLEQM+ETT+G     QWP KRRPSK  SRT + A  P                                        + DHDDD+I+ GLV                                              SS      S VAPFHGPLP S  FG SS   L    +P GD   A   +  + D R   +N+ LAAV GISV+Q      +   P D+ +    +  VA  S  F    A+  P+ T  D++G  AA GSG   G      TG+D        A SS  G   SRT +    + + P  L    LA AE++    A P GR A G  +MG+SGT VALPW +RRQA T+S               XXXXXXXXXXX    GGVAG +WGSD
Sbjct:  905 LTRHGGWAEAVAEAAEAAAAGGRGDGN-IISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQL----------------------------------QVGITDALDAFLPEGVVVGRTNNIGSTPFDDGDHGGDVHNGDDQGDGDDGDSGVLIPRCRNGRRGGWGSSSSDSEEDCRQNTAAKMNGGGTKKDGPAGIAVIESGNINTSSTQGGSASVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXQPRDRLEQMMETTLGRSTGQQWP-KRRPSKTMSRTTRQATHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLQGDHDDDSIEDGLV---------------------------------------------VSSVIPDAASCVAPFHGPLPVSLAFGCSSDGLLA---MPAGDDAFAAKGSRAR-DERNLSIND-LAAVRGISVKQ------QQPLPKDRRKNQPPSDSVAPSSAGFTGNSASGVPVRTWDDASGGDAAGGSGLPNGEGR---TGNDLVTPNGPLAVSSSTGV--SRTFQ---HSAQPPHPLKHGSLAYAEAS----ATPAGRVADGPDSMGISGTSVALPW-SRRQASTSSCNAGGAVGAGANRRRXXXXXXXXXXX----GGVAGSSWGSD 1520

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A7S3YF43_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF43_HETAK)

HSP 1 Score: 149 bits (375), Expect = 4.220e-37
Identity = 79/143 (55.24%), Postives = 104/143 (72.73%), Query Frame = 1

Query:  100 PPEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            P +V+ AW++   L  A+ KNN TKR I++RLR+N RQAE  + DL  KITGEDR QLM+LQYRIGKLEL+NMELEQS+IVH+S M+GKDLTI KL+LQL VRD+ I  Q++ L+ HGLD    +    +++Q G+  + D  
Sbjct:   74 PSDVRRAWRDVGALRRAVEKNNSTKRSIAKRLRHNERQAESMRQDLATKITGEDRIQLMELQYRIGKLELENMELEQSKIVHDSVMKGKDLTIMKLRLQLQVRDKIIESQRAALAHHGLDRAVSYRSLALMEQEGVAVSFDTI 216

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A7S3HBS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBS1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.820e-37
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 1

Query:  103 PEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDA--LDAFLP 534
            PE+  AW+ECEQL  AI KNN  K+ I++RLR+N ++AE F+ +L  KITGEDR +LM+LQY++G+LEL+NMELEQ RIVHES ++GKDL IQKL+LQLAVRD+ I+ QQ+VL E+ LDG  G+    +++Q  + DA  L A +P
Sbjct:   58 PEIVEAWQECEQLRKAIMKNNGMKKNIAKRLRHNEKEAENFRDELGDKITGEDRRELMELQYQVGRLELENMELEQHRIVHESILKGKDLEIQKLKLQLAVRDKLINRQQNVLLENNLDGKVGYTQLALMEQTLMGDAEFLTAMVP 203

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A7S2CYK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CYK5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.930e-35
Identity = 81/144 (56.25%), Postives = 106/144 (73.61%), Query Frame = 1

Query:  100 PPEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNA--GFPGAVVVDQVGITDALDA 525
            P  VK AW ECEQL +AI KN+  KR I++RLR+N RQAE F+     +ITG DR QL++LQY+IGKLEL+NM+LEQ++I+H S M+GKDLTIQKLQLQLA+RD+ IS Q+ VL E GL+  A  G+ G +++ Q  +    DA
Sbjct:  146 PDSVKSAWSECEQLKNAIDKNSSMKRSIAKRLRDNERQAEEFRQTTTTRITGYDRQQLLQLQYKIGKLELENMQLEQAQIIHNSMMKGKDLTIQKLQLQLAMRDKVISQQREVLHEAGLEDRAVKGYSGLLLMGQNNLAQNFDA 289

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A7S2W4P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4P3_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.400e-34
Identity = 74/143 (51.75%), Postives = 102/143 (71.33%), Query Frame = 1

Query:  100 PPEVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            P +V+ AW ECEQL  AI +N+  KR I++RLR N R AE FK  L  ++TGEDR QL++LQY+IG+LEL+NM+LEQ++ +H S M+GKDLTIQKLQLQLA++D+ I  Q+ VL  HGLD + G+ G  ++    + +  D  
Sbjct:  126 PGDVRAAWGECEQLRHAIDRNSSVKRSIAKRLRENERAAEEFKTTLNTRVTGEDRQQLIQLQYKIGRLELENMQLEQAQFIHNSIMKGKDLTIQKLQLQLAMKDKLIQQQRQVLKAHGLDKHVGYTGMHLMHHGALAENFDTM 268

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A6G0XL15_9STRA (Kinesin motor domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL15_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.340e-20
Identity = 59/141 (41.84%), Postives = 90/141 (63.83%), Query Frame = 1

Query:  106 EVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            ++ VA  E  +L   I + +  K +++R+LR   R AE F+A LE  IT +++ +L+ ++YRIGKLELDNMELEQ+R V E+  RGKDLT++KL+LQL +RD+ I  QQ++L +H L     +     ++   +TD  D  
Sbjct:  161 DIAVAKIEISRLQDEIKELSADKSELTRKLRQTERAAEEFRAALEHTITSDEKRELLLMEYRIGKLELDNMELEQTRTVQETLSRGKDLTVEKLKLQLRLRDKIIQKQQAILDQHDLGHEVRYGILDTLEDATLTDGFDTL 301

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA)

HSP 1 Score: 105 bits (263), Expect = 8.920e-20
Identity = 59/141 (41.84%), Postives = 90/141 (63.83%), Query Frame = 1

Query:  106 EVKVAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            ++ VA  E  +L   I   +  K +++R+LR   R AE F+A LE  IT +++ +L+ ++YRIGKLEL+NMELEQ+R VHE+  RGKDLT++KL+LQL +RD+ I  QQ++L +H L     +     ++   +TD  D  
Sbjct:  577 DIAVAKLEIARLQDEIKDLSTEKSELTRKLRQTERAAEEFRAALEHTITSDEKRELLLMEYRIGKLELENMELEQTRTVHETLSRGKDLTLEKLKLQLRLRDKIIQKQQAILDKHDLGHEVRYGILDTLEDATLTDGFDTL 717

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 9.530e-19
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 1

Query:  133 EQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            E L   I   +E K  ++R+LR+  + AE F+A LE  IT +++ +L+ ++YRIGKLEL+NMELEQ+R V E+  RGKDLTI+KL+LQL +RD  I  QQ++L +H +     +     ++   +TD  D  
Sbjct:  517 ESLQDDIKDLSEEKTDLTRKLRHTEKAAEEFRAALEHNITSDEKRELLLMEYRIGKLELENMELEQTRTVQETLSRGKDLTIEKLKLQLRLRDNIIQKQQAILDKHDIGHEVSYGILDTLEDATLTDGFDTL 648

[Close]

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Match: A0A3R7CBX2_9STRA (Kinesin-like protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CBX2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.760e-18
Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 1

Query:  115 VAWKECEQLCSAISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEHGLDGNAGFPGAVVVDQVGITDALDAF 528
            VA  E  +L   I   +  K +++R+LR   R AE F+A LE  IT +++ +L+ ++YRIGKLEL+NMELEQ+R V E+  RGKDLTI+KL+LQL +RD+ I  QQ++L +H +     F     ++   +TD  D  
Sbjct:  501 VAKMEIGRLQDDIKDLSTEKGELTRKLRLTERVAEEFRAALEHTITNDEKRELLLMEYRIGKLELENMELEQTRTVQETISRGKDLTIEKLKLQLRLRDKIIQKQQAILDKHDIGHEVRFGILDTLEDATLTDGFDTL 638

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig693.15703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
D8LJ11_ECTSI	1.000e-82	51.53	Kinesin motor domain-containing protein, putative ...	[more]
A0A6H5L427_9PHAE	6.430e-77	43.11	Kinesin motor domain-containing protein n=1 Tax=Ec...	[more]
A0A7S3YF43_HETAK	4.220e-37	55.24	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S3HBS1_9STRA	4.820e-37	56.85	Hypothetical protein (Fragment) n=2 Tax=Spumella e...	[more]
A0A7S2CYK5_9STRA	5.930e-35	56.25	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2W4P3_9STRA	2.400e-34	51.75	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A6G0XL15_9STRA	1.340e-20	41.84	Kinesin motor domain-containing protein n=1 Tax=Ap...	[more]
A0A485KW97_9STRA	8.920e-20	41.84	Kinesin-like protein n=1 Tax=Aphanomyces stellatus...	[more]
A0A1V9ZPN4_9STRA	9.530e-19	42.42	Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID...	[more]
A0A3R7CBX2_9STRA	4.760e-18	42.75	Kinesin-like protein n=8 Tax=Aphanomyces astaci Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig693	contig	L-elsbetiae_contig693:10153..14020 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	303.1
Seed ortholog evalue	3.5e-79
Seed eggNOG ortholog	2880.D8LJ11
KEGG ko	ko:K10401
Hectar predicted targeting category	other localisation
EggNOG free text desc.	microtubule motor activity
EggNOG OGs	COG5059@1,KOG0242@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko04812
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-20_002270.1
Exons	4
Model size	2236
Cds size	2232
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig693.15703.1	prot_L-elsbetiae_contig693.15703.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig693 10153..14018 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816768.3958585-CDS-L-elsbetiae_contig693:10152..10398	1622816768.3958585-CDS-L-elsbetiae_contig693:10152..10398	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 10153..10398 +
1691683798.6737745-CDS-L-elsbetiae_contig693:10152..10398	1691683798.6737745-CDS-L-elsbetiae_contig693:10152..10398	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 10153..10398 +
1622816768.4095407-CDS-L-elsbetiae_contig693:11363..11513	1622816768.4095407-CDS-L-elsbetiae_contig693:11363..11513	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 11364..11513 +
1691683798.6897442-CDS-L-elsbetiae_contig693:11363..11513	1691683798.6897442-CDS-L-elsbetiae_contig693:11363..11513	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 11364..11513 +
1622816768.4224272-CDS-L-elsbetiae_contig693:11854..11956	1622816768.4224272-CDS-L-elsbetiae_contig693:11854..11956	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 11855..11956 +
1691683798.7057977-CDS-L-elsbetiae_contig693:11854..11956	1691683798.7057977-CDS-L-elsbetiae_contig693:11854..11956	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 11855..11956 +
1622816768.4364543-CDS-L-elsbetiae_contig693:12284..14018	1622816768.4364543-CDS-L-elsbetiae_contig693:12284..14018	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 12285..14018 +
1691683798.7171705-CDS-L-elsbetiae_contig693:12284..14018	1691683798.7171705-CDS-L-elsbetiae_contig693:12284..14018	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig693 12285..14018 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig693:10153..14020+
coding sequence from alignment at L-elsbetiae_contig693:10153..14020+

protein sequence of mRNA_L-elsbetiae_contig693.15703.1

>prot_L-elsbetiae_contig693.15703.1 ID=prot_L-elsbetiae_contig693.15703.1|Name=mRNA_L-elsbetiae_contig693.15703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=744bp
LSRRGGWAEAVAEAAEAAAGGAAGGTGESIPPPPPEVKVAWKECEQLCSA
ISKNNETKRKISRRLRNNSRQAERFKADLEGKITGEDRNQLMKLQYRIGK
LELDNMELEQSRIVHESAMRGKDLTIQKLQLQLAVRDRTISLQQSVLSEH
GLDGNAGFPGAVVVDQVGITDALDAFLPEGAVVGGTDGVKNDGLSRTGGG
SAAGNPGRRGGWESPSDSDHTAQDENEDYDDDDDEDGDDSASNATSRAPS
SYQAVPTSVSTPQNATAAAAARERQQQHQPLQRQQQQQQPRDRLEQMIET
TVGGANSQWPLKRRPSKATSRTRQPAHQPQPSRRRRAPPDATARRRDHDD
DAIDGGLVGLSAFSRKMARVGDDGGAAETAGRTDGIGGGSGAAAAAAAAA
ALSHSSPAAQNTSLVAPFHGPLPSSFPFGSSSFDTLPVGPLPGGDARTAD
STAEVKGDGRKNPLNEPLAAVEGISVRQHVQPGGKHDAPHDQNQTNTEVA
ARSGNFGVKPAAVFPISTCGDSNGRGAASGSGADTGAALASGTGDDPAAG
KNITAASSLVGGGGSRTDRGDGRAGKQPSQLTKQGLASAESTKAQAAVPT
GRAAAGGYNMGVSGTGVALPWRNRRQAPTTSSATATGAGGGAGANRRRMR
REQTRARATGEGGVAGPNWGSDTTTGGGGLGASSSTTNATGEGLLPTPQR
WEGGGRGSANSEGGPGDNELPRGGGGGGGGAGEERPGAVAVANL

mRNA from alignment at L-elsbetiae_contig693:10153..14020+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig693.15703.1 ID=mRNA_L-elsbetiae_contig693.15703.1|Name=mRNA_L-elsbetiae_contig693.15703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3868bp|location=Sequence derived from alignment at L-elsbetiae_contig693:10153..14020+ (Laminarionema elsbetiae ELsaHSoW15)
CTTTCCAGACGTGGGGGGTGGGCAGAGGCTGTTGCGGAAGCAGCGGAGGC
GGCTGCTGGCGGCGCCGCGGGTGGAACCGGTGAAAGCATCCCGCCCCCAC
CGCCCGAGGTGAAGGTGGCGTGGAAAGAGTGTGAGCAGCTGTGCAGCGCC
ATATCCAAGAACAATGAGACGAAGCGCAAGATATCGCGGCGGCTAAGGAA
CAACAGCCGCCAGGCGGAGAGGTTCAAGGCGGACCTCGAGGGCAAGGTGT
GCGGCGAATAAGCTCTCGTGGGCGGGTTGGTCCAGGGCTTCTGTGCCGTC
GCGCTGAATGGCCAGACACCCTGTTGAAATACTCGATTTCAGTCATTTGT
ATAAGAAATAACCACCTGAGAAGTAATACCGGAATAGTCTCCAATACTTC
GTATAAGATCGGATCATTGTGCATACCTACGGGTCGTACATTGAACCATA
ACAGTGACGGTCCATCCGACCATTGTTCATAGGAAAATCCAAAACGTTGC
TAGGCGGGTTGACCGCCTGTGTACCGAGATCGGTAGATTGCATTAGTCCG
TGTGTGTGCATCTTTCCGTGATAGGTTGGAGGCTTGCCCTTGTCGTGCTG
ACCCCACCTGCCCACTCTCCTACCCTGCTACTCTCTTATTCTCCTACTTT
ATTTTCTTTCCCACTTCTTCCAAGGCCCTTGGCCTTTTCCAAATCCCTCG
GGACTCTCGCGAGTCCCAGAACTCCTTCTCTTTCCCTACCTTTCGGCTAA
CTGCCTGTCGGCTAACTAAGCGCCAATTCAAAACTATCTCCTCTGGTACA
CAAACAAGTGTACGTTACAGTCACTCTATGAGCCTCTGCACACTGTTCCT
ACATTGACCATTGCCAAGGTACGACCACCACTGTTTACATACCAACACAC
CTCTGCCGGGAACACGCCTGAGGCGCTGGATGAGATGGTGCCTGCGGTTG
CCTTGATCTGACCGTGAACACGGGAAGACGTTCATAGTTCCCGCGGCCCC
CACACGCGCGAGGGATAGGGTAGTACCGCCGACGAACCGATCAAGACACC
AACATTACGTGGAGGCGGTTGCAATTTGTTTGGTAGGCAATGCACCCTGG
GAAAACAAGGAGCTCCGGCCTTTTCTGCTTGTAGAGATATCTGAATGCTT
TGAGCTCCCCCGACTCTTCTTGCCGCATTTCTTCTCCACTTTTCTACTAC
TTTCACTTCAGATCACTGGAGAGGACAGGAACCAGTTGATGAAACTGCAG
TACCGCATCGGTAAGCTCGAACTGGACAACATGGAACTAGAGCAGAGCCG
CATCGTGCACGAGAGCGCCATGCGGGGGAAGGACCTCACCATACAGAAGC
TGCAGCTACAGGTGGGCATGAAGGGGTGATCGCATTGGTCCAGAGTCACC
CAATTCTACCCCATCAATACGAGGACTCGTGATCTACGACGGCGGTCAAG
AATAGGGACAACCGACTCGTCTGGACATACCTTGCGACTCTTGCCAAGAC
CTCTAGACATTGGTCCCTGGTGCGAGCGTAGCGCGCACCAAAACCAGCAC
GTTGAGAGCGTTCCTTGTAGGACATATTTTCCCTTCCTCGACCACACAGA
CATAAATCTACCTCACCATGTGTTCACGGCACACTGACCCACCGTCTTTG
ACCTCCAATCTGTGTCGCATTTGTACCGGAATATCGCACACTGCCGCTAC
AGCTGGCGGTACGAGACCGAACGATTTCTCTTCAGCAGTCGGTGCTTTCC
GAGCATGGGCTTGACGGCAACGCAGGGTTTCCGGGCGCCGTTGTCGTAGA
TCAGGTACGTATGTACATACTTTTATACTTCAATCCCCCTCCTGGTTTGC
CCTGCATCCCCATACAACCAGCCACTGCAACTTTTGTTTTTGCCGAGGAG
CATTGCTCTTCTTGGTGCTTGTACTTCTGTCGCCGCCATCGCCAGGTAGG
TGTAGTTCGTCTGCTGCCGTCTGACGTTTGGGTCGTGTTGCTTGAAATTT
CCCCAAACCTTCGTGCTGTGGCACTCGATAAACAGTCCGACAATGATCCG
CCCATCCCACGCTCCCGCGTTGTTTGCAATTAGTTACTGTATCAGCAGTA
AATTAACGCTGGCCTTATTTTGGCTGCCTCAGGTCGGTATAACGGATGCT
TTGGACGCATTCCTCCCAGAGGGTGCCGTCGTTGGCGGCACCGATGGCGT
GAAAAACGACGGTTTGTCGAGAACTGGCGGCGGGAGCGCTGCAGGAAATC
CCGGAAGAAGAGGTGGGTGGGAGTCGCCTTCAGATAGCGACCACACGGCT
CAGGATGAAAACGAAGACTACGATGACGACGATGACGAGGACGGCGACGA
TTCCGCTAGTAACGCTACCAGTCGTGCACCTTCATCATACCAGGCGGTGC
CGACGTCCGTCTCGACACCTCAAAATGCGACGGCAGCAGCAGCAGCTAGA
GAGCGGCAGCAGCAGCATCAGCCGCTGCAGCGGCAGCAGCAGCAGCAGCA
ACCGAGAGACCGGCTCGAGCAGATGATAGAGACAACCGTAGGCGGGGCAA
ACAGCCAGTGGCCCCTGAAGCGCCGGCCGTCCAAGGCAACGTCGCGAACG
CGCCAGCCCGCCCACCAGCCGCAGCCGTCGCGGCGAAGGAGAGCTCCCCC
GGACGCTACAGCGAGGCGAAGGGATCATGACGACGACGCAATTGACGGCG
GTCTCGTTGGTTTATCCGCATTTTCTAGAAAAATGGCGAGGGTTGGTGAC
GATGGAGGGGCGGCAGAAACGGCTGGTCGGACGGATGGGATTGGAGGGGG
ATCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTGAGCCACAGTT
CGCCTGCGGCACAAAATACTTCCCTCGTGGCTCCGTTTCACGGCCCGTTA
CCGTCGTCCTTTCCCTTCGGAAGTAGCAGCTTTGATACGCTCCCGGTGGG
GCCGTTGCCCGGTGGCGATGCCCGTACCGCCGACAGCACCGCTGAGGTGA
AAGGTGATGGTAGGAAGAATCCACTCAACGAGCCGCTAGCCGCCGTCGAA
GGAATCTCGGTGAGGCAACACGTGCAGCCCGGCGGTAAGCACGACGCCCC
CCACGATCAAAACCAAACAAACACAGAGGTAGCAGCTCGCTCGGGAAATT
TCGGCGTAAAACCCGCCGCAGTTTTCCCCATTTCGACCTGCGGGGATTCC
AACGGGAGAGGGGCTGCCAGTGGGAGCGGGGCAGACACCGGTGCCGCTCT
CGCCAGCGGCACCGGCGATGATCCAGCTGCAGGAAAGAATATCACTGCTG
CTTCTTCCCTTGTTGGCGGGGGCGGGAGCCGAACTGACCGCGGCGATGGT
AGGGCCGGGAAACAACCTTCCCAGCTGACGAAGCAAGGCCTGGCGAGCGC
AGAATCGACCAAGGCACAGGCGGCAGTGCCGACTGGTCGGGCCGCCGCCG
GTGGGTACAACATGGGCGTTTCGGGTACGGGTGTGGCTCTGCCGTGGAGA
AACAGGCGGCAGGCACCAACGACGTCCTCTGCCACAGCAACGGGCGCGGG
TGGCGGGGCCGGTGCAAACAGAAGGAGGATGAGGCGCGAGCAGACCCGCG
CCAGGGCCACCGGCGAGGGCGGAGTCGCCGGACCAAACTGGGGTAGCGAC
ACGACGACAGGTGGCGGCGGCCTGGGCGCCTCCTCTTCCACCACAAATGC
TACTGGCGAGGGATTGCTCCCCACCCCCCAGCGATGGGAAGGAGGCGGGC
GCGGTAGTGCCAACAGCGAGGGCGGTCCTGGGGACAACGAGCTGCCGCGA
GGAGGAGGAGGAGGAGGAGGAGGCGCGGGCGAGGAAAGACCAGGAGCCGT
TGCGGTGGCAAATCTAGA

Coding sequence (CDS) from alignment at L-elsbetiae_contig693:10153..14020+

>mRNA_L-elsbetiae_contig693.15703.1 ID=mRNA_L-elsbetiae_contig693.15703.1|Name=mRNA_L-elsbetiae_contig693.15703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4464bp|location=Sequence derived from alignment at L-elsbetiae_contig693:10153..14020+ (Laminarionema elsbetiae ELsaHSoW15)
CTTTCCAGACGTGGGGGGTGGGCAGAGGCTGTTGCGGAAGCAGCGGAGGC
GGCTGCTGGCGGCGCCGCGGGTGGAACCGGTGAAAGCATCCCGCCCCCAC
CGCCCGAGGTGAAGGTGGCGTGGAAAGAGTGTGAGCAGCTGTGCAGCGCC
ATATCCAAGAACAATGAGACGAAGCGCAAGATATCGCGGCGGCTAAGGAA
CAACAGCCGCCAGGCGGAGAGGTTCAAGGCGGACCTCGAGGGCAAGCTTT
CCAGACGTGGGGGGTGGGCAGAGGCTGTTGCGGAAGCAGCGGAGGCGGCT
GCTGGCGGCGCCGCGGGTGGAACCGGTGAAAGCATCCCGCCCCCACCGCC
CGAGGTGAAGGTGGCGTGGAAAGAGTGTGAGCAGCTGTGCAGCGCCATAT
CCAAGAACAATGAGACGAAGCGCAAGATATCGCGGCGGCTAAGGAACAAC
AGCCGCCAGGCGGAGAGGTTCAAGGCGGACCTCGAGGGCAAGATCACTGG
AGAGGACAGGAACCAGTTGATGAAACTGCAGTACCGCATCGGTAAGCTCG
AACTGGACAACATGGAACTAGAGCAGAGCCGCATCGTGCACGAGAGCGCC
ATGCGGGGGAAGGACCTCACCATACAGAAGCTGCAGCTACAGATCACTGG
AGAGGACAGGAACCAGTTGATGAAACTGCAGTACCGCATCGGTAAGCTCG
AACTGGACAACATGGAACTAGAGCAGAGCCGCATCGTGCACGAGAGCGCC
ATGCGGGGGAAGGACCTCACCATACAGAAGCTGCAGCTACAGCTGGCGGT
ACGAGACCGAACGATTTCTCTTCAGCAGTCGGTGCTTTCCGAGCATGGGC
TTGACGGCAACGCAGGGTTTCCGGGCGCCGTTGTCGTAGATCAGCTGGCG
GTACGAGACCGAACGATTTCTCTTCAGCAGTCGGTGCTTTCCGAGCATGG
GCTTGACGGCAACGCAGGGTTTCCGGGCGCCGTTGTCGTAGATCAGGTCG
GTATAACGGATGCTTTGGACGCATTCCTCCCAGAGGGTGCCGTCGTTGGC
GGCACCGATGGCGTGAAAAACGACGGTTTGTCGAGAACTGGCGGCGGGAG
CGCTGCAGGAAATCCCGGAAGAAGAGGTGGGTGGGAGTCGCCTTCAGATA
GCGACCACACGGCTCAGGATGAAAACGAAGACTACGATGACGACGATGAC
GAGGACGGCGACGATTCCGCTAGTAACGCTACCAGTCGTGCACCTTCATC
ATACCAGGCGGTGCCGACGTCCGTCTCGACACCTCAAAATGCGACGGCAG
CAGCAGCAGCTAGAGAGCGGCAGCAGCAGCATCAGCCGCTGCAGCGGCAG
CAGCAGCAGCAGCAACCGAGAGACCGGCTCGAGCAGATGATAGAGACAAC
CGTAGGCGGGGCAAACAGCCAGTGGCCCCTGAAGCGCCGGCCGTCCAAGG
CAACGTCGCGAACGCGCCAGCCCGCCCACCAGCCGCAGCCGTCGCGGCGA
AGGAGAGCTCCCCCGGACGCTACAGCGAGGCGAAGGGATCATGACGACGA
CGCAATTGACGGCGGTCTCGTTGGTTTATCCGCATTTTCTAGAAAAATGG
CGAGGGTTGGTGACGATGGAGGGGCGGCAGAAACGGCTGGTCGGACGGAT
GGGATTGGAGGGGGATCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGC
CTTGAGCCACAGTTCGCCTGCGGCACAAAATACTTCCCTCGTGGCTCCGT
TTCACGGCCCGTTACCGTCGTCCTTTCCCTTCGGAAGTAGCAGCTTTGAT
ACGCTCCCGGTGGGGCCGTTGCCCGGTGGCGATGCCCGTACCGCCGACAG
CACCGCTGAGGTGAAAGGTGATGGTAGGAAGAATCCACTCAACGAGCCGC
TAGCCGCCGTCGAAGGAATCTCGGTGAGGCAACACGTGCAGCCCGGCGGT
AAGCACGACGCCCCCCACGATCAAAACCAAACAAACACAGAGGTAGCAGC
TCGCTCGGGAAATTTCGGCGTAAAACCCGCCGCAGTTTTCCCCATTTCGA
CCTGCGGGGATTCCAACGGGAGAGGGGCTGCCAGTGGGAGCGGGGCAGAC
ACCGGTGCCGCTCTCGCCAGCGGCACCGGCGATGATCCAGCTGCAGGAAA
GAATATCACTGCTGCTTCTTCCCTTGTTGGCGGGGGCGGGAGCCGAACTG
ACCGCGGCGATGGTAGGGCCGGGAAACAACCTTCCCAGCTGACGAAGCAA
GGCCTGGCGAGCGCAGAATCGACCAAGGCACAGGCGGCAGTGCCGACTGG
TCGGGCCGCCGCCGGTGGGTACAACATGGGCGTTTCGGGTACGGGTGTGG
CTCTGCCGTGGAGAAACAGGCGGCAGGCACCAACGACGTCCTCTGCCACA
GCAACGGGCGCGGGTGGCGGGGCCGGTGCAAACAGAAGGAGGATGAGGCG
CGAGCAGACCCGCGCCAGGGCCACCGGCGAGGGCGGAGTCGCCGGACCAA
ACTGGGGTAGCGACACGACGACAGGTGGCGGCGGCCTGGGCGCCTCCTCT
TCCACCACAAATGCTACTGGCGAGGGATTGCTCCCCACCCCCCAGCGATG
GGAAGGAGGCGGGCGCGGTAGTGCCAACAGCGAGGGCGGTCCTGGGGACA
ACGAGCTGCCGCGAGGAGGAGGAGGAGGAGGAGGAGGCGCGGGCGAGGAA
AGACCAGGAGCCGTTGCGGTGGCAAATCTAGTCGGTATAACGGATGCTTT
GGACGCATTCCTCCCAGAGGGTGCCGTCGTTGGCGGCACCGATGGCGTGA
AAAACGACGGTTTGTCGAGAACTGGCGGCGGGAGCGCTGCAGGAAATCCC
GGAAGAAGAGGTGGGTGGGAGTCGCCTTCAGATAGCGACCACACGGCTCA
GGATGAAAACGAAGACTACGATGACGACGATGACGAGGACGGCGACGATT
CCGCTAGTAACGCTACCAGTCGTGCACCTTCATCATACCAGGCGGTGCCG
ACGTCCGTCTCGACACCTCAAAATGCGACGGCAGCAGCAGCAGCTAGAGA
GCGGCAGCAGCAGCATCAGCCGCTGCAGCGGCAGCAGCAGCAGCAGCAAC
CGAGAGACCGGCTCGAGCAGATGATAGAGACAACCGTAGGCGGGGCAAAC
AGCCAGTGGCCCCTGAAGCGCCGGCCGTCCAAGGCAACGTCGCGAACGCG
CCAGCCCGCCCACCAGCCGCAGCCGTCGCGGCGAAGGAGAGCTCCCCCGG
ACGCTACAGCGAGGCGAAGGGATCATGACGACGACGCAATTGACGGCGGT
CTCGTTGGTTTATCCGCATTTTCTAGAAAAATGGCGAGGGTTGGTGACGA
TGGAGGGGCGGCAGAAACGGCTGGTCGGACGGATGGGATTGGAGGGGGAT
CAGGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTGAGCCACAGTTCG
CCTGCGGCACAAAATACTTCCCTCGTGGCTCCGTTTCACGGCCCGTTACC
GTCGTCCTTTCCCTTCGGAAGTAGCAGCTTTGATACGCTCCCGGTGGGGC
CGTTGCCCGGTGGCGATGCCCGTACCGCCGACAGCACCGCTGAGGTGAAA
GGTGATGGTAGGAAGAATCCACTCAACGAGCCGCTAGCCGCCGTCGAAGG
AATCTCGGTGAGGCAACACGTGCAGCCCGGCGGTAAGCACGACGCCCCCC
ACGATCAAAACCAAACAAACACAGAGGTAGCAGCTCGCTCGGGAAATTTC
GGCGTAAAACCCGCCGCAGTTTTCCCCATTTCGACCTGCGGGGATTCCAA
CGGGAGAGGGGCTGCCAGTGGGAGCGGGGCAGACACCGGTGCCGCTCTCG
CCAGCGGCACCGGCGATGATCCAGCTGCAGGAAAGAATATCACTGCTGCT
TCTTCCCTTGTTGGCGGGGGCGGGAGCCGAACTGACCGCGGCGATGGTAG
GGCCGGGAAACAACCTTCCCAGCTGACGAAGCAAGGCCTGGCGAGCGCAG
AATCGACCAAGGCACAGGCGGCAGTGCCGACTGGTCGGGCCGCCGCCGGT
GGGTACAACATGGGCGTTTCGGGTACGGGTGTGGCTCTGCCGTGGAGAAA
CAGGCGGCAGGCACCAACGACGTCCTCTGCCACAGCAACGGGCGCGGGTG
GCGGGGCCGGTGCAAACAGAAGGAGGATGAGGCGCGAGCAGACCCGCGCC
AGGGCCACCGGCGAGGGCGGAGTCGCCGGACCAAACTGGGGTAGCGACAC
GACGACAGGTGGCGGCGGCCTGGGCGCCTCCTCTTCCACCACAAATGCTA
CTGGCGAGGGATTGCTCCCCACCCCCCAGCGATGGGAAGGAGGCGGGCGC
GGTAGTGCCAACAGCGAGGGCGGTCCTGGGGACAACGAGCTGCCGCGAGG
AGGAGGAGGAGGAGGAGGAGGCGCGGGCGAGGAAAGACCAGGAGCCGTTG
CGGTGGCAAATCTA