mRNA_L-elsbetiae_contig6924.15695.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6924.15695.1
Unique NamemRNA_L-elsbetiae_contig6924.15695.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 5.590e-100
Identity = 266/404 (65.84%), Postives = 308/404 (76.24%), Query Frame = 1
Query:    1 VEVNDRGFDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGFSALHMAAHHDHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGAAKKLLLAGANSLLTWSN-SSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVD-TGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
            VE+++ G DK G S G IP+I AA +GLS IVR L++QG  VS+T+DAGF+ALH AAH     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        L A AN LLTWS+ SSG+SFVPL+VA QTGRSAVV ELLR+ GI  CGG SGG DALR AAV+GQ+D ++MLMDAGVVD  G AL+ AVGS +EA+V +LLR+Q+ER    Q SYVN AR+D G T LL SF G    K CNPRITRRL+DAGA+T+SAV +R  R    V VTPLEY+  W   E +   PAT DE L R EA RR+LL+V AVHA+SW+WP +A LLARPA   R TA+ + T LT +LPVL+RRA RR+LL +TLFR
Sbjct:    4 VELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERW---QTSYVNIARDDDGLTALLWSFRGNK-NKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPAT-DEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPR-TAKHSPTQLTTVLPVLRRRAGRRALLWDTLFR 401          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.090e-71
Identity = 153/279 (54.84%), Postives = 186/279 (66.67%), Query Frame = 1
Query:  379 HLGAAKKLLLAGANSLLTWSNS-SGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGS-DALRQAAVFGQIDSIAMLMDAGVVD-TGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
            HLGA K LL A AN LLT S+  SG+SFVPL+VA QTGRSAVVRELLR+ GI  CGG SG   DALR AAV+GQ+D ++++M AGVVD  G AL+ AVGS +EA+V +LLR+Q+ER    Q SYVN A +D G T LL SF G    K CNPRITRRL+DAGA+T+S V +R  R    V +TPLEY+                       EA RR+LLQ  AVHA+SW+WP +  +LARPA   R T   + TPL+ ML VL+RRAR R+ L +TLFR
Sbjct:   24 HLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERW---QTSYVNTACDDDGLTALLWSF-GGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTRVNMTPLEYVN----------------------EATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKH-SPTPLSTMLTVLRRRARTRASLWDTLFR 275          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 5.450e-50
Identity = 157/398 (39.45%), Postives = 200/398 (50.25%), Query Frame = 1
Query:   22 FDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGFSALHM--AAHHDHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGAAKKLLLAGANSLLTWSNSSGKSF-VPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
             D+R NS GA PL+ A   G S I + LI +G  VSI D  GF+ALH   A   D A                               XXXXXXXXXXXXX                     +   ++LL   AN LL  ++  G +  VPLD+A + G + VVREL+++ GI GC   S G+ AL  AA    +D +A+L +AGVVDTG+AL  A G   EASV +LLR + +  G        NAR+  G TPL+V   GC       PRI R L+DAGA+T+S V V   +   +   TPL +    +  +        T EHL R EAI RLLL+V+AVHA+SWLWP  A  + R    T    EP    L +MLP+LKRR +RR  L  TL R
Sbjct:  132 IDQR-NSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQA---PRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR---ATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLR 522          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 2.570e-48
Identity = 125/275 (45.45%), Postives = 167/275 (60.73%), Query Frame = 1
Query:  400 LLLAGANSLLTWSNSSGKS-FVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPAL--VRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNA-TLLARPAKGTRRTA--EPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
            LLLA A+ LLT ++ SGK  F+PLDVA Q G   VV EL+RQ GI GCGG SGG +ALRQAA+F ++D +A+L DAGVVDTG AL+ A G   EA + +LL + + R    +A+Y+N   N  G T LL         + C PR+ + L++AGA+T+S VL+ CN+ P      +TPL      + G   +  P T +E  ++ E IRRLLL+ EAVHA+SWLWP +  T+    AKGT RT     A+TP  M++  + RR R R  L   L R
Sbjct:  167 LLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTL-NGVGLTSLLDGI------QRCRPRVVQLLVEAGADTTSPVLI-CNQ-PGEDDFHITPLGLTMCLLGGRSAK--PLTMEEQ-NKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM--IGRRTRGRKGLLAALLR 427          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 9.930e-47
Identity = 123/280 (43.93%), Postives = 168/280 (60.00%), Query Frame = 1
Query:  379 HLGAAKKLLLAGANSLLTW-SNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETC--PATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPA-KGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
            ++ AA+ LLLA A+ LLT   + SG++F+PLD A + G   VV EL+RQ GI GCGG SGG  AL+QAA F  ++ + +L +AGVVDTG AL+ A G   E  + +LL + + R    +A+YVN  R+  G TPLL         +   PR+ R L++AGA+T+S V VR       V +TPL      V  +       PA+  E LH+ EAIRRLLL+VEAVHA+SWLWP + + + R A +GT RT    ST +T+ + V +RRAR R +    L R
Sbjct:  160 NVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNT-RDRGGVTPLLWGI------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASP-EQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTA-ISTAVTLPMLVTRRRARGRKVPLAALLR 430          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.650e-42
Identity = 110/261 (42.15%), Postives = 147/261 (56.32%), Query Frame = 1
Query:  424 LLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206
            LL    SSG +FVPLD A   G  AV REL+++ GI GC G S G DAL QAAV   +D +A+L DAGVVDTG AL+  V   +E ++ +LL ++ E  G  + +Y +  R+ RG TPLL +    P    C+PR+ R L+DAGA+ + AV V  +      + TPL+  T  +  +  +   AT  + L    A RRLLLQVE VHA SWLW G+A   A P K   +T      PL   LP++ RR+ RR      +FR
Sbjct:  171 LLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGE--GTARTTYASTPRDGRGHTPLLSAVTTGP----CSPRVVRLLVDAGADATLAVRVP-DGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQ-LRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 6.050e-41
Identity = 118/275 (42.91%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  400 LLLAGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAG-VVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAV-LVRCNRIPALVRVTPLEYLTAWV-PGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWP-GNATLLARPAKGTR-RTAEPA-STPLTMMLPVLKRRARRRSLLSETLFR 1206
            LL A AN LL      G S+VPL++A   G   V RE++RQ GI GCGG SGG +ALRQAA    ++ +A+L+DAG VVDTG ALI A  + +  +V +LLRR++    A   +YVN  R+  G TP++ + +    G++C+P+I R L+DAGA T+ AV + R          TPL + T  +  G  D    A T E L R +  R LL + EAVHA+SWLW  G    +A+ A  T+  TA  A +TPL  M P+L+R+   R +L +TLFR
Sbjct:  164 LLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ----ADADAYVNGTRDPYGRTPVMCA-VDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGE--AATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFR 431          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.550e-37
Identity = 112/275 (40.73%), Postives = 158/275 (57.45%), Query Frame = 1
Query:  382 LGAAKKLLLAGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCN-PRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRR--------TAEPASTP-LTMMLPVLKRRARR 1176
            L A ++LL A AN L+T   +   + +PLD A + G   V+REL+++ GI GCGGQS G  AL  A    ++ ++A+L  AGVVDTG+AL  + G  +EASV YLL+   +  G    +YVN  R+  G TPLL S   C + +  + PR+ R L++AGA+T++ +    +    L   TPL+ LT  +  ++       + + L R E IRRLLLQVEAVHA SWLWP ++        G RR        TA  A+ P L  +LP+L+RRARR
Sbjct:  147 LEATRELLRANANPLIT--RAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP--GAYVN-VRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLK-LTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSS------GDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARR 409          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.550e-36
Identity = 101/222 (45.50%), Postives = 129/222 (58.11%), Query Frame = 1
Query:  415 ANSLLTWSNS-SGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNAT 1077
            AN+LL    + SG +FVPLDVAVQ G S VVREL  Q G+ GCGG SGG ++LR A     +D + +L   GVVDTGRAL+ A  + +E SV +LL+ Q        A YVNN  +  G TPL+ +   C      +PRI R LIDA A+T S VLV  +      R TPL + T  +   +     AT +E L   +AI RLL QV+AVHA+SWLW  + T
Sbjct:  156 ANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ----AGGGAWYVNNTLDPFGRTPLVCTIEACGSS---SPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNAT-EEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDT 369          
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.190e-36
Identity = 95/211 (45.02%), Postives = 124/211 (58.77%), Query Frame = 1
Query:  409 AGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLR-RQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEA 1038
            A AN LLT    SG +FVPLD A + G++ VVREL++Q  I GCGG SGG  ALR AA+   +D +++L DAGV+DTG ALI A G   EA V  LL+ R     G     YVN+  +  G TPLL S  G   G  C+PR+ R L+DAGA+T SAV ++         VTP+++ T  +    D    A  ++H+H+  AI RL  QVEA
Sbjct:  172 AKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAM-EKHVHKLRAIHRLFSQVEA 381          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVU3_ECTSI5.590e-10065.84EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KEI1_9PHAE2.090e-7154.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI5.450e-5039.45EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KQV0_9PHAE2.570e-4845.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA9_9PHAE9.930e-4743.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI3.650e-4242.15EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI6.050e-4142.91EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D8LJF9_ECTSI2.550e-3740.73EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE1.550e-3645.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL33_9PHAE2.190e-3645.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6924contigL-elsbetiae_contig6924:2949..4157 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue8.2e-83
Seed eggNOG ortholog2880.D7FVU3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAnkyrin-repeat protein similar to EsV-1-1
Ec32 orthologEc-01_002170.1
Exons1
Model size1209
Cds size1209
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.8218412-CDS-L-elsbetiae_contig6924:2948..41571622816767.8218412-CDS-L-elsbetiae_contig6924:2948..4157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6924 2949..4157 +
1691683798.2374485-CDS-L-elsbetiae_contig6924:2948..41571691683798.2374485-CDS-L-elsbetiae_contig6924:2948..4157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6924 2949..4157 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6924.15695.1prot_L-elsbetiae_contig6924.15695.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6924 2949..4157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6924.15695.1

>prot_L-elsbetiae_contig6924.15695.1 ID=prot_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
VEVNDRGFDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGF
SALHMAAHHDHAEIARMLARAGSDLDAATLEGDTPLHLATSYGNTEVVGA
LIEEGASVNSRNPGGATPLYVAAMGGHLGAAKKLLLAGANSLLTWSNSSG
KSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQID
SIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNN
ARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIP
ALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAI
SWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETL
FR*
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mRNA from alignment at L-elsbetiae_contig6924:2949..4157+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6924.15695.1 ID=mRNA_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1209bp|location=Sequence derived from alignment at L-elsbetiae_contig6924:2949..4157+ (Laminarionema elsbetiae ELsaHSoW15)
GTAGAGGTCAATGACCGCGGCTTCGATAAACGAGGCAACTCGATAGGCGC CATCCCCCTCATTTACGCCGCACGGAAAGGACTGTCGACGATCGTCAGGG CCCTGATCGACCAGGGAGACACCGTGTCGATCACGGACGACGCCGGCTTC TCGGCTTTGCACATGGCGGCTCATCACGACCACGCCGAGATCGCGAGGAT GCTTGCCAGGGCTGGCTCGGACCTAGACGCGGCGACCCTCGAGGGCGACA CGCCGCTCCACCTGGCCACGAGCTACGGGAACACGGAGGTGGTCGGAGCC CTGATCGAAGAGGGTGCTTCCGTGAACAGCCGCAATCCCGGGGGAGCGAC GCCGCTGTACGTCGCGGCGATGGGGGGGCACCTGGGCGCAGCCAAGAAGC TCCTCCTCGCCGGGGCAAACTCTTTGCTGACGTGGTCGAACTCTTCGGGC AAGAGCTTCGTCCCGCTGGACGTGGCGGTGCAGACCGGCAGGTCGGCGGT GGTGCGCGAGCTGTTGCGCCAGCGCGGGATCGGCGGCTGCGGCGGGCAGA GCGGCGGATCGGATGCGCTCCGCCAGGCCGCGGTGTTCGGGCAGATCGAC TCGATCGCGATGCTGATGGACGCTGGAGTGGTCGATACGGGCCGAGCCCT GATCGAAGCCGTCGGGAGCTGCCAGGAGGCTTCGGTGGCGTATCTCTTGC GGCGGCAAAAGGAACGGCCGGGTGCCCGTCAGGCTTCTTACGTGAACAAC GCCCGCAACGACAGGGGCGCCACGCCCTTACTCGTTAGCTTCCTGGGCTG CCCCCTCGGTAAGGTGTGCAACCCCAGGATCACGCGGCGGCTTATCGACG CCGGGGCGGAGACATCCTCTGCCGTTCTGGTCCGCTGCAACAGAATCCCC GCCCTTGTGCGTGTGACGCCGCTGGAGTACTTGACCGCATGGGTCCCTGG CGAGCAGGACGAAACTTGCCCTGCGACCACCGACGAGCATCTGCATCGGT GGGAGGCCATCCGCCGCTTGCTCTTGCAAGTGGAAGCGGTGCACGCGATC TCTTGGCTGTGGCCCGGCAATGCCACGCTCCTCGCACGCCCCGCAAAGGG TACGAGGAGGACGGCTGAGCCCGCTTCAACTCCGCTGACGATGATGCTGC CGGTCTTGAAGCGGAGGGCGAGAAGACGCAGTTTGCTCTCGGAAACCCTG TTCAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6924:2949..4157+

>mRNA_L-elsbetiae_contig6924.15695.1 ID=mRNA_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig6924:2949..4157+ (Laminarionema elsbetiae ELsaHSoW15)
GTAGAGGTCAATGACCGCGGCTTCGATAAACGAGGCAACTCGATAGGCGC
CATCCCCCTCATTTACGCCGCACGGAAAGGACTGTCGACGATCGTCAGGG
CCCTGATCGACCAGGGAGACACCGTGTCGATCACGGACGACGCCGGCTTC
TCGGCTTTGCACATGGCGGCTCATCACGACCACGCCGAGATCGCGAGGAT
GCTTGCCAGGGCTGGCTCGGACCTAGACGCGGCGACCCTCGAGGGCGACA
CGCCGCTCCACCTGGCCACGAGCTACGGGAACACGGAGGTGGTCGGAGCC
CTGATCGAAGAGGGTGCTTCCGTGAACAGCCGCAATCCCGGGGGAGCGAC
GCCGCTGTACGTCGCGGCGATGGGGGGGCACCTGGGCGCAGCCAAGAAGC
TCCTCCTCGCCGGGGCAAACTCTTTGCTGACGTGGTCGAACTCTTCGGGC
AAGAGCTTCGTCCCGCTGGACGTGGCGGTGCAGACCGGCAGGTCGGCGGT
GGTGCGCGAGCTGTTGCGCCAGCGCGGGATCGGCGGCTGCGGCGGGCAGA
GCGGCGGATCGGATGCGCTCCGCCAGGCCGCGGTGTTCGGGCAGATCGAC
TCGATCGCGATGCTGATGGACGCTGGAGTGGTCGATACGGGCCGAGCCCT
GATCGAAGCCGTCGGGAGCTGCCAGGAGGCTTCGGTGGCGTATCTCTTGC
GGCGGCAAAAGGAACGGCCGGGTGCCCGTCAGGCTTCTTACGTGAACAAC
GCCCGCAACGACAGGGGCGCCACGCCCTTACTCGTTAGCTTCCTGGGCTG
CCCCCTCGGTAAGGTGTGCAACCCCAGGATCACGCGGCGGCTTATCGACG
CCGGGGCGGAGACATCCTCTGCCGTTCTGGTCCGCTGCAACAGAATCCCC
GCCCTTGTGCGTGTGACGCCGCTGGAGTACTTGACCGCATGGGTCCCTGG
CGAGCAGGACGAAACTTGCCCTGCGACCACCGACGAGCATCTGCATCGGT
GGGAGGCCATCCGCCGCTTGCTCTTGCAAGTGGAAGCGGTGCACGCGATC
TCTTGGCTGTGGCCCGGCAATGCCACGCTCCTCGCACGCCCCGCAAAGGG
TACGAGGAGGACGGCTGAGCCCGCTTCAACTCCGCTGACGATGATGCTGC
CGGTCTTGAAGCGGAGGGCGAGAAGACGCAGTTTGCTCTCGGAAACCCTG
TTCAGGTGAGTAGAGGTCAATGACCGCGGCTTCGATAAACGAGGCAACTC
GATAGGCGCCATCCCCCTCATTTACGCCGCACGGAAAGGACTGTCGACGA
TCGTCAGGGCCCTGATCGACCAGGGAGACACCGTGTCGATCACGGACGAC
GCCGGCTTCTCGGCTTTGCACATGGCGGCTCATCACGACCACGCCGAGAT
CGCGAGGATGCTTGCCAGGGCTGGCTCGGACCTAGACGCGGCGACCCTCG
AGGGCGACACGCCGCTCCACCTGGCCACGAGCTACGGGAACACGGAGGTG
GTCGGAGCCCTGATCGAAGAGGGTGCTTCCGTGAACAGCCGCAATCCCGG
GGGAGCGACGCCGCTGTACGTCGCGGCGATGGGGGGGCACCTGGGCGCAG
CCAAGAAGCTCCTCCTCGCCGGGGCAAACTCTTTGCTGACGTGGTCGAAC
TCTTCGGGCAAGAGCTTCGTCCCGCTGGACGTGGCGGTGCAGACCGGCAG
GTCGGCGGTGGTGCGCGAGCTGTTGCGCCAGCGCGGGATCGGCGGCTGCG
GCGGGCAGAGCGGCGGATCGGATGCGCTCCGCCAGGCCGCGGTGTTCGGG
CAGATCGACTCGATCGCGATGCTGATGGACGCTGGAGTGGTCGATACGGG
CCGAGCCCTGATCGAAGCCGTCGGGAGCTGCCAGGAGGCTTCGGTGGCGT
ATCTCTTGCGGCGGCAAAAGGAACGGCCGGGTGCCCGTCAGGCTTCTTAC
GTGAACAACGCCCGCAACGACAGGGGCGCCACGCCCTTACTCGTTAGCTT
CCTGGGCTGCCCCCTCGGTAAGGTGTGCAACCCCAGGATCACGCGGCGGC
TTATCGACGCCGGGGCGGAGACATCCTCTGCCGTTCTGGTCCGCTGCAAC
AGAATCCCCGCCCTTGTGCGTGTGACGCCGCTGGAGTACTTGACCGCATG
GGTCCCTGGCGAGCAGGACGAAACTTGCCCTGCGACCACCGACGAGCATC
TGCATCGGTGGGAGGCCATCCGCCGCTTGCTCTTGCAAGTGGAAGCGGTG
CACGCGATCTCTTGGCTGTGGCCCGGCAATGCCACGCTCCTCGCACGCCC
CGCAAAGGGTACGAGGAGGACGGCTGAGCCCGCTTCAACTCCGCTGACGA
TGATGCTGCCGGTCTTGAAGCGGAGGGCGAGAAGACGCAGTTTGCTCTCG
GAAACCCTGTTCAGGTGA
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