mRNA_L-elsbetiae_contig692.15692.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig692.15692.1
Unique NamemRNA_L-elsbetiae_contig692.15692.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: D8LCF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCF0_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 9.690e-158
Identity = 236/247 (95.55%), Postives = 244/247 (98.79%), Query Frame = 1
Query:    1 MPAMATKETKPIIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            MPA  +KE+KPIIPESVLKKRRTKEAIAAKQAAKQE+DQKAAAAKKTEIF+RAERYVKEYRA+ENDSIRFRREAKAAGNIHVPAEAGVV+VVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKV+KQRIPISDNSV+EGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKIN LIKRML
Sbjct:    1 MPAAVSKESKPIIPESVLKKRRTKEAIAAKQAAKQEADQKAAAAKKTEIFERAERYVKEYRAQENDSIRFRREAKAAGNIHVPAEAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINALIKRML 247          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A7S3V109_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V109_9STRA)

HSP 1 Score: 320 bits (820), Expect = 6.400e-108
Identity = 168/239 (70.29%), Postives = 203/239 (84.94%), Query Frame = 1
Query:   34 IIPESVLKKRRTKEAIAAKQAAKQESDQKAAA---AKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            +IPESVLKKR T   +A  +A ++E   K AA    K+++ F+RAE+YVKEY+A END +R +R AK+ GN++V  E+ +++  RIRGIIG+SPKVRKILQLLRLRQI+N+VF+K N AT+ MLRLVEP+VAYGYP+LKTVREL+YKRGFGKV+KQRIPI+DNSV+E  LGK  IICVEDLIHEIYTVGPNFKAA NFLWPFKLS+PNGGF++KLLHFNEGGDAG RGAKIN LIKRM+
Sbjct:    4 VIPESVLKKRAT---LAELKAKREEHKAKVAAERKVKRSKAFKRAEQYVKEYKAAENDLVRLKRVAKSEGNLYVEPESKLIVATRIRGIIGISPKVRKILQLLRLRQIHNTVFLKANKATINMLRLVEPFVAYGYPSLKTVRELVYKRGFGKVNKQRIPIADNSVIEEVLGKKDIICVEDLIHEIYTVGPNFKAAANFLWPFKLSSPNGGFKRKLLHFNEGGDAGNRGAKINALIKRMI 239          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A836CG85_9STRA (Ribosomal protein L30, ferredoxin-like fold domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG85_9STRA)

HSP 1 Score: 320 bits (819), Expect = 9.080e-108
Identity = 164/237 (69.20%), Postives = 198/237 (83.54%), Query Frame = 1
Query:   31 PIIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            P +PESVLKKRR +E I+A++     + +K  AAK+ E+F RA++Y +EY   +  +I  RR AK  GN +VPAEA + +V+RIRGIIGV PKVRKILQLLRLRQINN+VFVKLNAAT+KMLRLVEPY+AYGYPNLKT+++L+YKRGFGKV K RIPISDNSV+EG LGK GI+ V+DLIHEIYTVGP+FK ANNFLWPFKLSNP GGF QKLLHFNEGG+AGQRG +IN +I+ M+
Sbjct:    3 PFVPESVLKKRRAQEEISARKVKAASAAKKDRAAKRKELFVRAQKYEQEYNDADKAAIDLRRAAKKEGNFYVPAEAKLAVVIRIRGIIGVGPKVRKILQLLRLRQINNTVFVKLNAATIKMLRLVEPYIAYGYPNLKTIKQLVYKRGFGKVRKSRIPISDNSVIEGVLGKYGIVGVDDLIHEIYTVGPHFKEANNFLWPFKLSNPTGGFTQKLLHFNEGGEAGQRGEEINKMIRLMV 239          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A7S2WW50_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW50_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.070e-103
Identity = 164/235 (69.79%), Postives = 193/235 (82.13%), Query Frame = 1
Query:   37 IPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            +PESVLKKR T    AA +A  + + +  AA  K ++ +RAE YV EY+  END+IR RREAK AG+ +VP E  +  VVRIRGIIGVSPKVRKILQLLRLRQI+N VFVKLN+AT+KMLRLVEPY+AYGYPNLK+ REL+ KRGFGKV+KQRI ISDNSV+E  LGK  IICVEDLIHEIYTVGP+FK A+NFLWP KLS+P GGF +KL+HFNEGG+AG RG KINGLIK+M+
Sbjct:   22 VPESVLKKRDTANKNAAAKAEAKAAAELKAAENKEQMLKRAETYVNEYKQMENDAIRLRREAKVAGSYYVPEEPKLAFVVRIRGIIGVSPKVRKILQLLRLRQIHNGVFVKLNSATIKMLRLVEPYIAYGYPNLKSTRELVLKRGFGKVNKQRIAISDNSVIEQVLGKYDIICVEDLIHEIYTVGPHFKEASNFLWPMKLSSPKGGFSRKLIHFNEGGEAGLRGDKINGLIKQMI 256          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A4D9CRP3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRP3_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.520e-102
Identity = 159/235 (67.66%), Postives = 195/235 (82.98%), Query Frame = 1
Query:   37 IPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            IPES+LKKRRT+EA+ A + A++ + +KAA AK+ E  +RAE+Y+ EY+  END IR RREAKA+G  +VPAEA V  V+RIRGI GVSPKV+KILQLLRLRQI+N VF+KLN +TV +LR VEPY+AYGYPNLK+VRELIYKRG+ KV+KQR+P++DN++VE  LGK G+ICVEDLIHEIYTVGP+FK A NFLWPFKLS+P GG++ K  HF EGGDAG RG KIN  IK +L
Sbjct:    3 IPESILKKRRTQEALLATKLAEKAAAKKAARAKRGETVKRAEKYMNEYKKLENDQIRLRREAKASGAFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTVNLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPHFKQAANFLWPFKLSSPKGGYKDKKTHFIEGGDAGARGDKINAFIKAVL 237          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A7S4E8W3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8W3_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.100e-101
Identity = 155/237 (65.40%), Postives = 192/237 (81.01%), Query Frame = 1
Query:   31 PIIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            P +PESVLKKRR + AIAA + A          AKK  IF+RAE+Y  EY+ +END+IR RREAK A +I+VP EA +  V+RIRGIIG+SPKV+KILQLLRLRQ+++ VFVKLN +T+KMLRLVEPY+AYG PNLKTVREL+YKRG+GKV+KQR+PI +N+VVE  LGK  I+CVED+IHE+YT GP+FK   NFLWP KLS+P GGF+ KLLH+NEGGDAG RG KI+ L+K+M+
Sbjct:    2 PFVPESVLKKRRAQAAIAADKDAASXXXXXXXKAKKDVIFKRAEKYAAEYKQQENDAIRLRREAKKANSIYVPPEAKLAFVIRIRGIIGMSPKVKKILQLLRLRQLHSGVFVKLNGSTIKMLRLVEPYIAYGTPNLKTVRELVYKRGYGKVNKQRVPIDNNAVVEQVLGKYDIVCVEDVIHELYTTGPHFKEVANFLWPCKLSSPTGGFKMKLLHYNEGGDAGDRGEKIHELVKKMI 238          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A7S1G5B0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5B0_9STRA)

HSP 1 Score: 302 bits (774), Expect = 6.530e-101
Identity = 158/235 (67.23%), Postives = 192/235 (81.70%), Query Frame = 1
Query:   37 IPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            +PESV K+R+  E + AK+ A+  + ++ A   +TE F+RAE+YVKEYRA+E   +R RR+AK AGN  V  E  + LVVRIRGI+GVSPKVRKILQLLRLRQINN+VFV++N AT  ML +VEPY+A+GYPNLKTVREL+YKRGFGKV+KQRIP++DNSV+EG LGK  IICVEDL+HEI TVGP FK ANNFLWPFKLS+P GGF +KL HFNEGG+AG R  KIN L++RML
Sbjct:    6 VPESVFKRRKGLEELKAKREARHAAVRRDAKKNRTEAFKRAEKYVKEYRAEERSLLRLRRQAKKAGNFFVEPEGKLALVVRIRGIMGVSPKVRKILQLLRLRQINNAVFVRINKATRNMLTIVEPYIAWGYPNLKTVRELVYKRGFGKVNKQRIPLTDNSVIEGVLGKKDIICVEDLVHEITTVGPAFKEANNFLWPFKLSSPLGGFSKKLRHFNEGGEAGCREDKINALVQRML 240          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A6V2QDA7_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QDA7_HETAK)

HSP 1 Score: 302 bits (774), Expect = 1.290e-100
Identity = 160/223 (71.75%), Postives = 187/223 (83.86%), Query Frame = 1
Query:   34 IIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQ 702
            ++PESVLKKRRT E I AK+AA     +KA+ AKK +IF+RAE+YVKEY+  E  ++R RR+AKA GN +VPAEA V  V+RIRGIIGVSPKVRKILQLLRLRQI+N VFVKLNAAT+KMLRLVEP++AYGYPNLK+V++L+YKRGFGKV+ QRIP+S NSVVEGTLG  GIICVEDLIHEIYT GPNF+ ANNFLWPFKLS+  GG   KL H NEGG  G+
Sbjct:    5 LVPESVLKKRRTLEEIQAKKAADAVVAKKASRAKKGQIFRRAEKYVKEYKQMEKTAVRLRRQAKAKGNFYVPAEAKVAFVIRIRGIIGVSPKVRKILQLLRLRQIHNGVFVKLNAATIKMLRLVEPFIAYGYPNLKSVKDLVYKRGFGKVNGQRIPLSCNSVVEGTLGDKGIICVEDLIHEIYTCGPNFRDANNFLWPFKLSSAKGGMAGKLNHHNEGGQCGE 227          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A2D4BFA6_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BFA6_PYTIN)

HSP 1 Score: 301 bits (770), Expect = 2.650e-100
Identity = 155/236 (65.68%), Postives = 190/236 (80.51%), Query Frame = 1
Query:   34 IIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            ++PESVLKKRRT E + AK+A K + ++      +   F+ AE+YVKEYR  E  ++  RR+AK+ GN +VPAEA +  V+RIRGIIGVSPKVRKILQL RLRQI N VFVKLN AT+ MLRLVEP+V YGYPNLKT RELIYKRGFGKV  QRI ++DNS++E +LG  GIIC+EDLIHEI+TVGP+FK A+NFLWPF+LS+PNGG++QKLLHF EGGDAG RG +IN  IK++L
Sbjct:    5 LVPESVLKKRRTVEEVKAKRAVKAQKEKAHRKQVRQIAFKSAEKYVKEYRQIEKQNVLLRRQAKSTGNFYVPAEAKLAFVIRIRGIIGVSPKVRKILQLFRLRQIQNGVFVKLNKATINMLRLVEPFVTYGYPNLKTTRELIYKRGFGKVRGQRIALTDNSIIEKSLGHHGIICIEDLIHEIFTVGPHFKEASNFLWPFQLSSPNGGYKQKLLHFCEGGDAGNRGEEINKFIKKVL 240          
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Match: A0A0W8C759_PHYNI (60S ribosomal protein L7 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C759_PHYNI)

HSP 1 Score: 300 bits (768), Expect = 3.290e-99
Identity = 158/244 (64.75%), Postives = 191/244 (78.28%), Query Frame = 1
Query:   10 MATKETKPIIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIFQRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML 741
            MA    K ++PES+LKKRRT E + AK+AAK  +D+      +   F+ AE+Y+KEYR  E  ++  RR+AK+ GN +VPAEA    V+RIRGIIGVSPKVRKILQLLRLRQI N VFVKLN AT+ MLRLVEP+V YGYPNLK  RELIYKRGFGKV  QRIP+++NSV+E +LG  GIIC+EDLIHEI+TVG +FK A NFLWPF+LS+PNGG+ +KLLHF EGGDAG RGA+IN  IK+ L
Sbjct:   51 MAPAAPKVLVPESILKKRRTLEQVKAKRAAKAAADRVHRKKVRQIAFKSAEKYIKEYRQLEKQAVTLRRQAKSTGNFYVPAEAKFAFVIRIRGIIGVSPKVRKILQLLRLRQIQNGVFVKLNKATINMLRLVEPFVTYGYPNLKVTRELIYKRGFGKVRGQRIPLTNNSVIEKSLGHVGIICIEDLIHEIFTVGEHFKQAANFLWPFQLSSPNGGYTKKLLHFAEGGDAGNRGAEINKFIKQCL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig692.15692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCF0_ECTSI9.690e-15895.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3V109_9STRA6.400e-10870.29Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A836CG85_9STRA9.080e-10869.20Ribosomal protein L30, ferredoxin-like fold domain... [more]
A0A7S2WW50_9STRA2.070e-10369.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CRP3_9STRA2.520e-10267.66Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4E8W3_9STRA6.100e-10165.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1G5B0_9STRA6.530e-10167.23Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6V2QDA7_HETAK1.290e-10071.75Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A2D4BFA6_PYTIN2.650e-10065.68Uncharacterized protein n=3 Tax=Pythium TaxID=4797... [more]
A0A0W8C759_PHYNI3.290e-9964.7560S ribosomal protein L7 n=3 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig692contigL-elsbetiae_contig692:16666..20436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.6
Seed ortholog evalue3.8e-123
Seed eggNOG ortholog2880.D8LCF0
Preferred nameRPL7
KEGG koko:K02937,ko:K08819,ko:K19933
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000172,GO:0000184,GO:0000447,GO:0000460,GO:0000462,GO:0000463,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0000956,GO:0001889,GO:0002165,GO:0002181,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008033,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009791,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0030016,GO:0030017,GO:0030312,GO:0030490,GO:0030684,GO:0030687,GO:0031090,GO:0031099,GO:0031100,GO:0031672,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035073,GO:0035210,GO:0042254,GO:0042273,GO:0042274,GO:0042788,GO:0042802,GO:0042803,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044449,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0046983,GO:0048513,GO:0048519,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061008,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097421,GO:0098588,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494,GO:1905267,GO:1990904
EggNOG free text desc.maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsCOG1841@1,KOG3184@2759
EC2.7.11.22,2.7.11.23
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01001,ko03011,ko04131
Ec32 ortholog descriptionRibosomal protein L30, ferredoxin-like fold domain
Ec32 orthologEc-26_004750.1
Exons4
Model size758
Cds size744
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig692.15692.1prot_L-elsbetiae_contig692.15692.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig692 16666..20422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.5489879-CDS-L-elsbetiae_contig692:16665..167851622816767.5489879-CDS-L-elsbetiae_contig692:16665..16785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 16666..16785 +
1691683798.0543091-CDS-L-elsbetiae_contig692:16665..167851691683798.0543091-CDS-L-elsbetiae_contig692:16665..16785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 16666..16785 +
1622816767.560964-CDS-L-elsbetiae_contig692:18171..183061622816767.560964-CDS-L-elsbetiae_contig692:18171..18306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 18172..18306 +
1691683798.066832-CDS-L-elsbetiae_contig692:18171..183061691683798.066832-CDS-L-elsbetiae_contig692:18171..18306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 18172..18306 +
1622816767.5730927-CDS-L-elsbetiae_contig692:19245..194701622816767.5730927-CDS-L-elsbetiae_contig692:19245..19470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 19246..19470 +
1691683798.0769913-CDS-L-elsbetiae_contig692:19245..194701691683798.0769913-CDS-L-elsbetiae_contig692:19245..19470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 19246..19470 +
1622816767.5857499-CDS-L-elsbetiae_contig692:20158..204221622816767.5857499-CDS-L-elsbetiae_contig692:20158..20422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 20159..20422 +
1691683798.0878298-CDS-L-elsbetiae_contig692:20158..204221691683798.0878298-CDS-L-elsbetiae_contig692:20158..20422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig692 20159..20422 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.599161-UTR-L-elsbetiae_contig692:20422..204361622816767.599161-UTR-L-elsbetiae_contig692:20422..20436Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig692 20423..20436 +
1691683798.0989006-UTR-L-elsbetiae_contig692:20422..204361691683798.0989006-UTR-L-elsbetiae_contig692:20422..20436Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig692 20423..20436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig692.15692.1

>prot_L-elsbetiae_contig692.15692.1 ID=prot_L-elsbetiae_contig692.15692.1|Name=mRNA_L-elsbetiae_contig692.15692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
MPAMATKETKPIIPESVLKKRRTKEAIAAKQAAKQESDQKAAAAKKTEIF
QRAERYVKEYRAKENDSIRFRREAKAAGNIHVPAEAGVVLVVRIRGIIGV
SPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVR
ELIYKRGFGKVHKQRIPISDNSVVEGTLGKAGIICVEDLIHEIYTVGPNF
KAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLIKRML*
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mRNA from alignment at L-elsbetiae_contig692:16666..20436+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig692.15692.1 ID=mRNA_L-elsbetiae_contig692.15692.1|Name=mRNA_L-elsbetiae_contig692.15692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3771bp|location=Sequence derived from alignment at L-elsbetiae_contig692:16666..20436+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCCATGGCGACCAAGGAGACCAAGCCCATCATCCCCGAGTCGGT GCTCAAGAAGCGCCGCACGAAGGAGGCCATCGCCGCGAAGCAGGCCGCGA AGCAGGAGTCCGACCAGAAGGTATGATTTCGGTGGTCGTGTGGCCACACA CAGCGCGCGAGAGGCATGGAGGCGCCATCGCCGGCCTCGACAGGAGGGAT GACCCAACGCGTCGTCCATCGAGGGTTTCCCACCGCCCATGACCTTCCTT TCTCTCGATCCATGCCTGCGTTATCTGGTTTAAATCCCTATGCGGTCTAA CCAGAGCGTGGGCTCGCCAGGCAACACACCATCCAGAGAGCAACAGACGC CTCTTGCCGCCGTACCCATGTAGACGCTTTGGTGTGCTTGTGAAAGCCTC ACTGTCACGAGGTTTAAATTTCCCTGCGTGGTCTAACCCGGACATCGAAG CCACTTCCTTGCACACACCTTGAACGAAGCAGTAGATGATAACATATAGC CGGAATCGATGGCTGGGAGTGAAAAGTAGTGTTTTCGCCCTCTCGCCTCA CGCGGAAGAAAGTCGCCAGGATGCCGTGTGCTCTATGTCTCTTCCCCGAA GGGTTTAAATTTCCCTCCGTGGTCTAACCCGAGGGGAAGAGACACGGCCG GCTCGTGGTGACAACGGCCCGGAAAGGGAGAGACGAGGTACGCCCATCTG ATTGCTTCCAGTGAACTATGCGGCGAGATGGATAAAACACACGCGAAAAA ATACATGGAAAAATGGCCAAATGGCCATCGAGTATTGAGCGTTGTTGTCG TTTACACCCCCGGCGCACTCAAGACCGAAGGCTTGCTTGTTAGACCTGAA ATGCATCATCCACCCGGACTACTCTCGCCTTGTAACTCCTAGCCTCGAGC AAATCACGAAGGAACGACAAAGTTGTAACTAAACACAAAGTTCGCGTAAA GACAAATGTGTCGTCCTCGTGGGAAGTTTGTTAGGTATGTACACGAGAGA TCTACCTACCGGTAGACACATGTTTGAACGTTCGTGGCGGACTGACATGT TTTTTTCAAGGGATGGTAGTAGGCTTCCGTAAGTTAGTCCCACTAAGAAA CCAGCGAAAAGTTTCTCTGCTGGAAGGCAGGGTGTGCTCTTAACTCCGAC CCACATCCCCCTGTATAAGCTTCCAAGTGAAGTGCATCGTCTAAATGTAG CTGACAGTTGATATCTGTTGGACGGGTTCATCAGGCATCGATGACAAACC GCATGCATATACCATATAAATTGCCGGATGCCGTGGAGTGATCACACATC CGTTCTGCGTGTGCATCGGCAGATGAAATTCAATTCCACGGTTCCCGTTA TAACAGCTTTTCAACAAGGTGTTGGAACAGATTCTACACTTCTCCCGCGT GTTCTTAATCTTCTTCCAATTGCGATCTTTCCCGCAGCCGGCCACTCACT CACCTGCACAGTCTCCCGTCTCCGACTCACCCCACGCGTGAAATATCTGA AAACAGGCGGCCGCCGCGAAGAAGACGGAGATCTTCCAGCGCGCCGAGCG CTACGTGAAGGAGTACCGCGCCAAGGAGAACGACTCCATCCGCTTCCGCC GCGAGGCGAAGGCGGCGGGCAACATCCACGTCCCGGCTGAGGTACACGTG TACATACCTGCTTAAATACATGCGCACATGCGTTGGTTTTCGGGAGACCA GCTCGCCGTCTGCACGAGTTCTGGCGCTGCTGTACCGCGCCACGGCTGTC TGTTGATGTATAAATACGAAATCGACGTTGACACGTTTTGGCTTGATCTT GTAAGAGGCTGTTTGAACAATCGCAACTCTTGGCTGCGCACCCGTGCTCT TCGAGATGGTAAGCGCAGTGTGTAAACGCAGTTCACGCCGCCAACATGGC AAGGTTTTTTCCCATGAGCGCGGAACGACCGCAGATGACGTGCTGATTGC TCGCCGCTTGGTGTGTGTGCGCGTTCATGTGTAGTGCGCAAGTTATATAC ACAAAAGCATTTGAGGTGCCGGTCGCCCCGGTAGTCTAGTTGGTATCCCC GAACACCTTCTAGCAGGCAGGTCGTGAGTTCAAATCTCAGCGGAAGCGAC TGTTTCTTGCAAAGTGAGTTTCTTCTCTCGCTTAGCGTATGTACACAAAC TTGCGACCTCACCGTCGACGAAGGAAAGGGACGGCTGAACCCTTCTCGCG ACAAAAATATTAGGCAAGCATCGCAGACGGGGGGAGTGGGGACCTTGGGG AAAGTAACTCTTCGTCTATGTGACCACGGTTCAGTACACGCTGGCAAGAT GTCCTCGTGACAAGGAGCCCATCGAGCACTGGAAATAAATGTGGGGAAGA AAAAAAAATTGTGGTCGATGTTTTCTCGGCAGCATCGCAGGAATGGGACG GACCGACAGGGACAAGCGGACATTGCATCTCGTTATTAAATAGCGAAGCG AGAGCCGCGGCAAGAAGATGATGAAATACTTTCTCATCACCCTGTGGTCA CGCTCACGATTCCCCCCACCCACCCCCCAACCCTCTCCCTTCTACCGCGT GTTTTTCTGTCTGCGTACCCCCCTTCTCAGGCCGGCGTCGTGCTGGTGGT CCGCATCCGCGGTATCATCGGTGTGTCCCCCAAGGTGCGCAAGATCCTGC AGCTCCTCCGCCTGCGCCAGATCAACAACTCGGTGTTCGTCAAGCTCAAC GCCGCGACCGTCAAGATGCTGCGCCTCGTGGAGCCCTACGTGGCCTACGG GTACCCAAACCTCAAGACCGTCCGCGAGCTCATCTACAAGCGCGGGTTCG GAAAGGTGTGTGTCTGTATGTCGGTGTGCCGTTTTCGTCCAACTCCGAAA CCACACTCAAAAATACAGGTTTTAAGCGTTCGGTTCGGTCCGAAAGTGCT CGCTCGTTTCTCTGCCAGTGGGAATCCCAGTAAGATCAAAAACCACCGCC TGGATTTATGGCAAAGGTGCGGAGGCTTGCGTCAAAAGAAGTTCTCGGAT GTCGTATGATTTGTTTTTGAAGCTCAACTCGTCACTCTCGAAGCATATCG CGACACTGCTGTACAAGCACCTCATGCGCGCGCGCAAGCCGATGTTTTGG GGTCCGCAAGGTTGTTTCAAAATCTAGAAGTTGGTGGTGAAAGTGGAGCA CCCGCTCCCTTTTCTTCCGTTGAAGGTGCACGAATCACACCGCCTGTCCC GCCTCCCGCTCCTCGACCATTTGTTCGCGGCCGAGGCCTGTTGCTCAAAC GGGTCGCGACAAGGGTGCAAGGTGTTTCCGCTCAAGGTCGTATTTTGTGC CTGCGATTCGCCACAACAGGGCGTGTCGTCGAGCTGTTTCTTGAAATAAA CAATGAATCAAAGATGGAACCTACCCCACACTAGAGCAAGTTTCTCTGGA CTGGATCATTTGGGGCACGAACAACCTCTAAATATCAGCCTCGTTCTCCC CTTGCCGCCCCTGACCCCTTCTGCGTGGATGGCTGACTCTCAGGTGCACA AGCAGCGCATCCCTATCTCGGACAACTCCGTGGTGGAGGGCACCCTGGGC AAGGCCGGCATCATCTGCGTGGAGGACCTTATCCACGAGATCTACACGGT CGGCCCCAACTTCAAGGCTGCCAACAACTTCCTCTGGCCCTTCAAGCTGT CCAACCCCAACGGCGGGTTCCGCCAGAAGCTGCTCCACTTCAACGAGGGC GGTGACGCCGGGCAGCGCGGTGCCAAGATCAACGGCCTCATCAAGCGCAT GCTTTGAAGCGCCACCTTGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig692:16666..20436+

>mRNA_L-elsbetiae_contig692.15692.1 ID=mRNA_L-elsbetiae_contig692.15692.1|Name=mRNA_L-elsbetiae_contig692.15692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig692:16666..20436+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCCATGGCGACCAAGGAGACCAAGCCCATCATCCCCGAGTCGGT
GCTCAAGAAGCGCCGCACGAAGGAGGCCATCGCCGCGAAGCAGGCCGCGA
AGCAGGAGTCCGACCAGAAGATGCCGGCCATGGCGACCAAGGAGACCAAG
CCCATCATCCCCGAGTCGGTGCTCAAGAAGCGCCGCACGAAGGAGGCCAT
CGCCGCGAAGCAGGCCGCGAAGCAGGAGTCCGACCAGAAGGCGGCCGCCG
CGAAGAAGACGGAGATCTTCCAGCGCGCCGAGCGCTACGTGAAGGAGTAC
CGCGCCAAGGAGAACGACTCCATCCGCTTCCGCCGCGAGGCGAAGGCGGC
GGGCAACATCCACGTCCCGGCTGAGGCGGCCGCCGCGAAGAAGACGGAGA
TCTTCCAGCGCGCCGAGCGCTACGTGAAGGAGTACCGCGCCAAGGAGAAC
GACTCCATCCGCTTCCGCCGCGAGGCGAAGGCGGCGGGCAACATCCACGT
CCCGGCTGAGGCCGGCGTCGTGCTGGTGGTCCGCATCCGCGGTATCATCG
GTGTGTCCCCCAAGGTGCGCAAGATCCTGCAGCTCCTCCGCCTGCGCCAG
ATCAACAACTCGGTGTTCGTCAAGCTCAACGCCGCGACCGTCAAGATGCT
GCGCCTCGTGGAGCCCTACGTGGCCTACGGGTACCCAAACCTCAAGACCG
TCCGCGAGCTCATCTACAAGCGCGGGTTCGGAAAGGCCGGCGTCGTGCTG
GTGGTCCGCATCCGCGGTATCATCGGTGTGTCCCCCAAGGTGCGCAAGAT
CCTGCAGCTCCTCCGCCTGCGCCAGATCAACAACTCGGTGTTCGTCAAGC
TCAACGCCGCGACCGTCAAGATGCTGCGCCTCGTGGAGCCCTACGTGGCC
TACGGGTACCCAAACCTCAAGACCGTCCGCGAGCTCATCTACAAGCGCGG
GTTCGGAAAGGTGCACAAGCAGCGCATCCCTATCTCGGACAACTCCGTGG
TGGAGGGCACCCTGGGCAAGGCCGGCATCATCTGCGTGGAGGACCTTATC
CACGAGATCTACACGGTCGGCCCCAACTTCAAGGCTGCCAACAACTTCCT
CTGGCCCTTCAAGCTGTCCAACCCCAACGGCGGGTTCCGCCAGAAGCTGC
TCCACTTCAACGAGGGCGGTGACGCCGGGCAGCGCGGTGCCAAGATCAAC
GGCCTCATCAAGCGCATGCTTTGAGTGCACAAGCAGCGCATCCCTATCTC
GGACAACTCCGTGGTGGAGGGCACCCTGGGCAAGGCCGGCATCATCTGCG
TGGAGGACCTTATCCACGAGATCTACACGGTCGGCCCCAACTTCAAGGCT
GCCAACAACTTCCTCTGGCCCTTCAAGCTGTCCAACCCCAACGGCGGGTT
CCGCCAGAAGCTGCTCCACTTCAACGAGGGCGGTGACGCCGGGCAGCGCG
GTGCCAAGATCAACGGCCTCATCAAGCGCATGCTTTGA
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