mRNA_L-elsbetiae_contig6917.15686.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 222 bits (566), Expect = 5.270e-64 Identity = 108/195 (55.38%), Postives = 132/195 (67.69%), Query Frame = 2 Query: 119 SLSAEPVADATTQVYMPRLTGLIDPHSGDNGTDPAQTTTDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDD-RLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGDRGGKSGPLNTACFCKESTC 700 SL+AE V + RL+GL++P+ NG+ P TTT +C LPVL GVD+VAYWTLP G+ PV GT NL++ GDYRFYFSSI NLR FE+DP++Y+PA+GGFCSYGVA E W LGPFG+P+KW ILP D +LH+FRS PM F N+E GDA+WN WF G + PLNTAC C E C Sbjct: 68 SLTAERVEYSLDGAEGTRLSGLVNPN---NGSHPTLTTTADCTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGAAPLNTACLCSEEMC 259
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: A0A6H5KGH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH5_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.130e-50 Identity = 90/159 (56.60%), Postives = 110/159 (69.18%), Query Frame = 2 Query: 239 ECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFG--DRGGKSGPLNTACFCKESTCDDQ 709 ECA Q+DLPVL GVD+V YW+LP A+ VLG+ NLM+ G+YRF+FSS+ NLR FEA L + G +ANEPVWT TLGPFGNP+KW I RLHIFRSS P F +D+PGN++RG+AVW WFG + P+NTACFC + CDDQ Sbjct: 27 ECAGQFDLPVLGGVDVVEYWSLPLAAEAVLGSPNLMSVFGNYRFFFSSVENLRVFEARGFS-LRSAGEKIWQRIANEPVWTSTTLGPFGNPSKWGIY-GGRLHIFRSSMPKEEFEQDIPGNLDRGNAVWERWFGGMEESLAVPPINTACFCNDRICDDQ 183
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.110e-37 Identity = 66/108 (61.11%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 392 LRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFG--DRGGKSGPLNTACFCKESTCDDQ 709 LR + D LKY+PA+GGFCSYG+ANE VWT TLGPFGNP+KW I RLHIFRSS P F ED+PGN++RG+AVW WFG + P+NTACFC + CDDQ Sbjct: 15 LRFSQHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIY-GGRLHIFRSSTPKEEFEEDIPGNLDRGNAVWEGWFGGMEESLMVPPINTACFCNDHICDDQ 121
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.060e-35 Identity = 73/168 (43.45%), Postives = 93/168 (55.36%), Query Frame = 2 Query: 221 AQTTTDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGD-----RGGKSGPLNTACFCKESTCDDQ 709 +QTTT EC + PVL G D+V+Y++L G + G Y F F+S N FEA PL Y+PA+GGFC+YG+A E WT TLGP +P W I D+ L IFRS P YF ED+PGNI G+ +W W+G+ +NTAC C C DQ Sbjct: 68 SQTTTWECGTSTE-PVLNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGEGTLPGADDTGSAMNTACLCNIEICLDQ 234
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 143 bits (360), Expect = 8.200e-35 Identity = 74/168 (44.05%), Postives = 93/168 (55.36%), Query Frame = 2 Query: 218 PAQTTTDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGD-YRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGDRGGKSG----PLNTACFCKESTCDD 706 PA TT EC P + G DLVAY +L G V G G Y F FS++ N FE+DP KYLPA+GGFCS+G+++E +W LGP NP W ++ DDRL++FRS P F +D I+ G+ VW WFG G P NTACFC E +C D Sbjct: 96 PAHVTTAECTGDTSKPAVKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIW-LIEDDRLYLFRSETPYDKFKDDKARYIKHGNQVWTEWFGGNPSNEGTVMTPFNTACFCSEESCAD 262
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 134 bits (338), Expect = 8.160e-32 Identity = 70/168 (41.67%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 218 PAQTTTDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGD-YRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGDRGGKSG----PLNTACFCKESTCDD 706 P TT EC P + G DLVAY +L G V G G Y F FS++ N FE+DP +YLPA+GGFC +G+++E VW LGP NP W ++ DDRL++FRS P F ++ I+ G+ +W WF G P NTACFC E TC D Sbjct: 96 PVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFW-LIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCAD 262
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: F0Y5C1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5C1_AURAN) HSP 1 Score: 132 bits (331), Expect = 1.680e-28 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 233 TDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPM-LYFAEDVPGNIERGDAVWNAWFGDRGGKSGPLNTACF 682 T+ C PVL G D+VAY +L GA+ G+ A GDY F+F+S AN AF ADP +Y P +GGFCSYG+++E WT TLGPF NP W+I+ D RL +F P +F++++ ++RG+ +W+ W+GD NT CF Sbjct: 17 TEVCTDAAAGPVLDGADVVAYHSLEAGANATYGSPEFEASYGDYSFWFASEANRAAFAADPARYAPKFGGFCSYGISDETFWTKSTLGPFSNPNVWRIV-DGRLLVFMYCTPEHKFFSQNITAQLDRGNQIWDTWWGD----DLVFNTQCF 162
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.060e-24 Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 263 PVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYF-AEDVPGNIERGDAVWNAWFGDRGGKSGPLNTACF 682 PVL G D+VAY L GA+ +G+A+ A G+Y FYF + N F ++P KY+P +GGFCSYG+ NE WT TLGP N W I+ DD L +F P F + ++ IERG+ +W+ W+ D NT CF Sbjct: 146 PVLEGADVVAYRYLNVGANATIGSADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVW-IIYDDHLFVFMYCTPEHKFVSRNITEEIERGNQIWSTWWND----VPTFNTGCF 281
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 108 bits (270), Expect = 1.920e-23 Identity = 60/140 (42.86%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 263 PVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITLGPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGDRGGKSGPLNTACF 682 PVL G D+VAY+ L D V G++ + + FYFSS N+ FE+DP KY+PA+GGFC+YGVA E WT T+ P W+I+ D RL F +FA +P I GDA W+ W G G NT CF Sbjct: 15 PVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRII-DGRLFFFHDIGVAAWFAALLPDAIREGDATWHGW-----GLEG-YNTNCF 147
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 103 bits (256), Expect = 1.740e-20 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 227 TTTDECARQYDLPVLAGVDLVAYWTLPNGADPVLGTANLMAFLGDYRFYFSSIANLRAFEADPLKYLPAYGGFCSYGVANEPVWTDITL--GPFGNPAKWKILPDDRLHIFRSSAPMLYFAEDVPGNIERGDAVWNAWFGDRGGKSGPLNTACFCKESTCD 703 T T++C PV +G D+VAY+ L +D VLG+ + Y FYFS+ N FE+ P Y+PA+GGFCSYGV+ E WT T+ G + + A W+++ D RL +F FA +P + +GDAVW AW G G N CF + + D Sbjct: 81 TITNDCMDAELGPVASGYDVVAYFDLDPLSDGVLGSPEFTSIYKGYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGA-WRVV-DGRLFLFHDPDVAALFAGLLPDAVRQGDAVWGAW-----GLDG-FNAGCFNVDLSSD 233 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6917.15686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6917.15686.1 >prot_L-elsbetiae_contig6917.15686.1 ID=prot_L-elsbetiae_contig6917.15686.1|Name=mRNA_L-elsbetiae_contig6917.15686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp MVVAATVNLFPAWVLERPAESTVSLSAEPVADATTQVYMPRLTGLIDPHSback to top mRNA from alignment at L-elsbetiae_contig6917:1516..10161+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6917.15686.1 ID=mRNA_L-elsbetiae_contig6917.15686.1|Name=mRNA_L-elsbetiae_contig6917.15686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8646bp|location=Sequence derived from alignment at L-elsbetiae_contig6917:1516..10161+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6917:1516..10161+ >mRNA_L-elsbetiae_contig6917.15686.1 ID=mRNA_L-elsbetiae_contig6917.15686.1|Name=mRNA_L-elsbetiae_contig6917.15686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig6917:1516..10161+ (Laminarionema elsbetiae ELsaHSoW15)back to top |