mRNA_L-elsbetiae_contig6914.15684.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: D7FVN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN7_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.410e-60 Identity = 107/150 (71.33%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 10 DPTKSGDGGSTSIVENLNEDEVATDNQDNHVDPEEDGRTSPFRGLCVARSTAALWGRRIVSVTTSDSAAFAVSELGEGYAWGGKDHWWFEIGADSHWQEHWRGDTTERSRLLLQTVHKQEPDEIAPDVEEDVEDIEIEKLTTLTQYYGVW 459 DP +S +G E E+EV TDNQDNHVDPE+D RTSPF GLCVARS AALWGRRI SVTTSDSAAFA SELGEG+AWGGKDHWWFEIG DSHWQEHWRGDTTERSRLLLQT+ KQEPDEI P+ +E+VE+ E T L Y + Sbjct: 381 DPAESAEG------ETSMENEVLTDNQDNHVDPEDDRRTSPFAGLCVARSAAALWGRRIASVTTSDSAAFAFSELGEGFAWGGKDHWWFEIGPDSHWQEHWRGDTTERSRLLLQTMQKQEPDEIFPEEKENVEENEARITTLLLVVYDTY 524
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A482S3L9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3L9_9ARCH) HSP 1 Score: 210 bits (534), Expect = 8.990e-58 Identity = 113/273 (41.39%), Postives = 169/273 (61.90%), Query Frame = 1 Query: 97 HVDPEEDGRTSPFRGLCVARSTAALWGRRIVSVTTSDSAAFAVSELGEGYAWGGKDHWWFEIGADSHWQEHWRGDTTERSRLLLQTVHKQEP---------DEIAPDVEEDVEDIEIEKLTTLTQYYGVWKPPPTN-HRLHYIQHTFLPKIKHPEVKYSLQCRGKHVEDMNKDELLDLLYDDIVLEKKVLGERQHRQIRQLELETLHMYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKSRD 885 ++DP + + SPF GL V+ +TA+LWGRR+ V S++ FA+++ GE YAWGG +WW EI DS +Q WRGDTT RS+LLL T K P DE++PD D ++E + + +YY VW+PPP R+ ++ LPKI++ +VK++L CRGK V +M K +L++ LYDDI LE+K+LGER H+ I+++EL+ + + K V+ I+EMW+PLRE+QAE A+ + + + E+ Y WR R+Q R+ Sbjct: 241 NIDPFMEAQESPFIGLNVSINTASLWGRRVHQVAVSENVLFALADTGEVYAWGGNSYWWHEIQPDSLYQTKWRGDTTARSQLLLGTKDKPLPPDQSLEQNVDEMSPD------DKKVEMVKVVAKYYNVWEPPPNPAQRMLHLDKDTLPKIEYDQVKFALTCRGKMVGEMTKMQLIEALYDDITLERKLLGERAHKAIKEIELQVAGLQKRKKKVLADKFLKRIDEMWAPLREVQAETQALTIAKKTSTQHELQVKREENYQEWRGRVQNKRE 507
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.080e-52 Identity = 110/255 (43.14%), Postives = 156/255 (61.18%), Query Frame = 1 Query: 124 TSPFRGLCVARSTAALWGRRIVSVTTSDSAAFAVSELGEGYAWGGKDHWWFEIGADSHWQEHWRGDTTERSRLLLQTVHKQEPDEIAPDVEE--DVEDIEIEKLTTLTQYYGVWK-PPPTNHRLHYIQHTFLPKIKHPEVKYSLQCRGKHVEDMNKDELLDLLYDDIVLEKKVLGERQHRQIRQLELETLHMYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKS 879 +SPF L V + A LWG+R+ SD+ A S+LGE + WGG DHWW+EI D+HWQ HWRGDTT RS+LLL T K EP P+V+E ++ D E L + YYG W PPP R + LP + + + SL+ RGK E+M K L DLL+ DI+LEK+VLGER HR+I +LE E + + + K L ++I +MW+PLREIQAE+ A + ++ + + A+ E AY WR++++++ Sbjct: 374 SSPFNDLVVGENAAKLWGKRVYDAAISDTVILAQSDLGELWTWGGSDHWWYEIEPDAHWQTHWRGDTTPRSQLLLGTRFKPEPP--PPEVDELGELND-GSEALKVVLTYYGKWSAPPPDVDRRKFYADECLPNVDYNWIVTSLEVRGKQPEEMTKLMLCDLLHRDIMLEKRVLGERAHRRIHELEEEIRELKKVRRVALAKRLVVDITKMWAPLREIQAEEDARDRQKKQTEVVENIAKREHAYEAWRQQVKEA 625
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A836CDL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL9_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.600e-32 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 76 ATDNQDNHVDPEEDGRTSPFRGLCVARSTAALWGRRIVSVTTSDSAAFAVSELGEGYAWGGKDHWWFEIGADSHWQEHWRGDTTERSRLLLQTVHKQE 369 A D+Q + DPE D TSPFR L RSTA LWG+RI SV S+ AAFA+SELGE +AWGG+ HWW ++ ADSHWQ HWRGDTT RS+LLLQT K E Sbjct: 358 ALDSQKFYYDPERDATTSPFRELSAGRSTAGLWGKRIASVALSEGAAFALSELGEVFAWGGRSHWWHDLAADSHWQTHWRGDTTARSQLLLQTTGKGE 455
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A6H5JIR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR7_9PHAE) HSP 1 Score: 113 bits (283), Expect = 4.210e-28 Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 688 MYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKSRDDA 891 MY KGKNVMGKSLRLEIEEMW+PLREIQAEDAAIKK NEEAGLG YARGE YS+WRERM ++R+DA Sbjct: 1 MYEKGKNVMGKSLRLEIEEMWAPLREIQAEDAAIKKANEEAGLGSQYARGEHVYSQWRERMAEARNDA 68
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: D7FVN6_ECTSI (Guanyl nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVN6_ECTSI) HSP 1 Score: 117 bits (292), Expect = 9.960e-26 Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 1 Query: 688 MYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKSRDDA 891 MY KGKNVMGKSLRLEIEEMW+PLREIQAEDAAIKK NEEAGLG YARGE YS+WRERM K+RDDA Sbjct: 1 MYEKGKNVMGKSLRLEIEEMWAPLREIQAEDAAIKKANEEAGLGSQYARGEHVYSQWRERMAKARDDA 68
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A7S2WSJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WSJ4_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.450e-23 Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 109 EEDGRTSPFRGLCVARSTAALWGRRIVSVTTSDSAAFAVSELGEGYAWGGKDHWWFEIGADSHWQEHW---RGDTTERSRLLLQTVHKQE-PDEIAP--DVEEDVEDIEIEKLTTLTQYYGVWKPPPTNH-RLHYIQHTFLPKIKHPEVKYSLQCRGKHVEDMNKDELLDLLYDDIV 618 ++ G SPF + A +TAA+WGRRIV+VT S + FA+++ GE AWGG+D WW EI + + RG T RS LLL KQ PD P D+ E ++ + YY VW+P P H R+ +++H LP++ +V SL+ RG MNK +++D L+ ++ Sbjct: 1 DDSGWVSPFTNVVCALNTAAIWGRRIVTVTASINTIFALTDSGEILAWGGRDQWWQEINPRDNESKEGIEDRGILTHRSELLLGLRGKQPWPDISEPQLDLGETENELYCRLQFVTSDYYNVWEPCPFPHLRMQHMEHIILPRVSFKDVFDSLEIRGFECTGMNKRQMIDKLHSALM 177
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A7S1TWJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWJ4_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.790e-19 Identity = 46/135 (34.07%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 481 RLHYIQHTFLPKIKHPEVKYSLQCRGKHVEDMNKDELLDLLYDDIVLEKKVLGERQHRQIRQLELETLHMYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKSRD 885 +L + + +P+I++ +VK L+CRGK E M K E+L+ L++ IVLEKKVLG R+HR+ R+ E + + + +N M K ++++++ W PL ++QA++ +K E+ + E+AY WR +++ R+ Sbjct: 8 KLKFYEKVLMPRIQYDDVKMCLECRGKVAESMTKTEMLNTLHECIVLEKKVLGLRKHREFREREEQIRELLGRKRNGMAKKIKVDLKGQWDPLADMQAKEELERKREEQGRAEVLFQMRENAYKTWRHHIKEMRE 142
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A7S2CE69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CE69_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 7.710e-17 Identity = 44/116 (37.93%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 433 TLTQYYGVWKPPP-TNHRLHYIQHTFLPKIKHPEVKYSLQCRGKH-VEDMNKDELLDLLYDDIVLEKKVLGERQHRQIRQLELETLHMYAKGKNVMGKSLRLEIEEMWSPLREIQA 774 T+T YY +W PP + R+ Y + +P I + +K SL+ RGK + + K E++ +LY DI+LEKKVLG R+H+ I E+E L + + ++ + K + E+ ++W PLR QA Sbjct: 8 TITTYYDIWMAPPLSTDRVKYYRDVLMPMILYDRLKLSLEIRGKSDLGSITKLEMVKILYRDILLEKKVLGHRKHKNIYDREMEVLDLRKRRRHKVAKKVTQEVVDLWEPLRHTQA 123
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Match: A0A836CBD3_9STRA (Guanyl nucleotide exchange factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 9.970e-7 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 688 MYAKGKNVMGKSLRLEIEEMWSPLREIQAEDAAIKKGNEEAGLGCDYARGEDAYSRWRERMQKSRDD 888 M KG+ M KSLRLE+E MW PL EI+AEDAA + + EA +Y + E Y RWR + R D Sbjct: 1 MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGD 67 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6914.15684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6914.15684.1 >prot_L-elsbetiae_contig6914.15684.1 ID=prot_L-elsbetiae_contig6914.15684.1|Name=mRNA_L-elsbetiae_contig6914.15684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp QSNDPTKSGDGGSTSIVENLNEDEVATDNQDNHVDPEEDGRTSPFRGLCVback to top mRNA from alignment at L-elsbetiae_contig6914:6402..10227- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6914.15684.1 ID=mRNA_L-elsbetiae_contig6914.15684.1|Name=mRNA_L-elsbetiae_contig6914.15684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3826bp|location=Sequence derived from alignment at L-elsbetiae_contig6914:6402..10227- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6914:6402..10227- >mRNA_L-elsbetiae_contig6914.15684.1 ID=mRNA_L-elsbetiae_contig6914.15684.1|Name=mRNA_L-elsbetiae_contig6914.15684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig6914:6402..10227- (Laminarionema elsbetiae ELsaHSoW15)back to top |