mRNA_L-elsbetiae_contig6888.15648.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI) HSP 1 Score: 547 bits (1410), Expect = 5.250e-183 Identity = 269/304 (88.49%), Postives = 281/304 (92.43%), Query Frame = 3 Query: 69 MANNSVATTLGQIPDDEAWHRTIILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPASVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFRRGGPLRKEASVETVVEAAAEVYAPAE 980 MA+ SVA TLGQIPDDEAWHRTIILPRDILDNPPSGEHE V WE ESSHR WGCELLQEAG+LLRLPQVVMCTAQNLLQRFFYRKPLT FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGV+PA VIPPESLR LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYL+VLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSL IKLPD+PPWW LFNADMQEMG+ICNTILALYHRPKV FLEPLC+ S+FRRGGPLR ++ VV+ EVYAPA+ Sbjct: 43 MADGSVARTLGQIPDDEAWHRTIILPRDILDNPPSGEHE---VDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVFRRGGPLR----IDAVVQNIQEVYAPAD 339
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA) HSP 1 Score: 341 bits (874), Expect = 1.150e-105 Identity = 169/272 (62.13%), Postives = 212/272 (77.94%), Query Frame = 3 Query: 117 EAWHRTIILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEE--DPRQPRAVVLVFHRMFERRIGVEPASVIPPESLRA-LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFRRGGPLRK 923 E WH ++LP +IL NPPS +H V WE E+ HR+WGCEL+QEAGILLRLPQVVMCT Q LLQRF+YRK LT FDAFSVAMGC+LLA K+EE + R VV+VFHRM+ RR G+ + ++ A L+ EM+RVE +VLK+LGFGFYNIMDHPHKFILYY++VL ++E +QR W+Y+ND+LRTDL LR+R+EVIACAAIYMA+R+L ++LP PPWW LFNA++ E+GQICN ILALY +PKV +LEPL S+F GG +R+ Sbjct: 1 EPWHSVVLLPEEILANPPSKDHG---VDWETETQHRAWGCELIQEAGILLRLPQVVMCTGQTLLQRFYYRKSLTKFDAFSVAMGCVLLAAKLEEAIGHTRVRDVVMVFHRMYLRRRGLPLEFLELGGTVYAELKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEA--TQRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVFAPGGAVRR 267
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK) HSP 1 Score: 305 bits (781), Expect = 4.220e-92 Identity = 154/281 (54.80%), Postives = 197/281 (70.11%), Query Frame = 3 Query: 72 ANNSVATTLGQIPDDEAWHRTIILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPASVIP--PESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFRRG 908 AN V T + E WH LP +ILDN PS + VPWE E R WGCEL+QEAG+LLRLPQVVM T QNLLQRFFYR+ L FDAF+VAMGC+ L+ K+EE P++ R ++ VFH + + R G EP + + ++ + E++++E HVLKELGF FYNIMDHPHKFILYY+KVL D ++QRAW+YVNDSLRTDL LR + VIACAAIYMA+R L + LP PPWW LF+A ++++ IC+ ILALY K ++EPL E ++F+RG Sbjct: 18 ANGEVKGTPEEEKAPEPWHMVQTLPAEILDNSPS---KKDGVPWEQEYKFRVWGCELVQEAGVLLRLPQVVMATGQNLLQRFFYRRSLKRFDAFTVAMGCLFLSCKVEEKPKRLREILFVFHHISQVRRG-EPITPLELGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVL--DGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVFKRG 292
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: W7U1X8_9STRA (Ania-6a type cyclin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1X8_9STRA) HSP 1 Score: 274 bits (701), Expect = 7.380e-78 Identity = 146/272 (53.68%), Postives = 182/272 (66.91%), Query Frame = 3 Query: 96 LGQIPDDEAWHRTIILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTA-------------------FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPASVIPPESLRA--LRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALY 848 L + D WH ++LPR +L PS VP +E HR +GCEL+QEAGILLR PQVVM TAQ L RFFYR+ LT+ FDAF+VAMGC+ LA K+EE PR PR V+ VFH M RR G+ P S++ S+R LR+ +L +E +VLKELGFGFY+IMDHPHKFILYY+K L D ++QRAWNY+NDSLR D +RFR+E+IAC A+YMASR L +KLPD PPW+ALF A ++EM + N IL+LY Sbjct: 33 LEDVSVDGEWHEVVLLPRHVLRESPS---RRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGP-SLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTL--DGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLY 298
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: F0YGC1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC1_AURAN) HSP 1 Score: 241 bits (616), Expect = 3.630e-70 Identity = 124/241 (51.45%), Postives = 164/241 (68.05%), Query Frame = 3 Query: 138 ILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPASVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHP--PWWALFNADMQEMGQICNTILALYHR 854 +LP D+L+N PS + V E + R WGCEL+QEAGILLRLPQVVMCT QN+ QRF+YR L FDAF AMGC LA KIEE P++ R ++VFH ++ R + + E+++VE H+LKELGF FY I+DH HKFIL+Y+K+L+ D G+++Q AW+Y+ND LRTD +LR+RSEV+ACAAIYMA+R L+ KLPD P PWW +F ++ + +LALY R Sbjct: 2 LLPADMLENSPS---KRDGVSAADEYAQRVWGCELIQEAGILLRLPQVVMCTGQNIFQRFYYRVSLKRFDAFLSAMGCFFLACKIEEKPKRLRECLMVFHFVYRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCD--GELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALYVR 236
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A0P1B0R9_PLAHL (Ania-6a type cyclin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R9_PLAHL) HSP 1 Score: 239 bits (610), Expect = 2.910e-67 Identity = 126/276 (45.65%), Postives = 182/276 (65.94%), Query Frame = 3 Query: 135 IILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERR-----IGVEPASVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFRRGG-PLRKEASVETV 944 ++LP L PS E VP +E HRS+GCEL+QEAG+LLRLPQVVM TAQ LLQRFFYRK L FDAF VA+ C+ LA K+EE P++ + VV VF+ M+ RR + + + R ++ VE VL +LGF Y+I +HPHK++LYY+KVL D ++Q+AW Y+NDSLRTDL +R++++ IACAAI++ASR L++ LP++PPW+ LF+ + ++ + I+ LY + K+ ++EPL E + F P+++E +E V Sbjct: 10 VLLPTPSLARSPSLEDG---VPPAVERMHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVL--DGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQEKLQWVEPLTEANPFEVDDQPMKEEEEIEEV 280
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A3M6VK16_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK16_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.230e-66 Identity = 126/272 (46.32%), Postives = 178/272 (65.44%), Query Frame = 3 Query: 135 IILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERR-----IGVEPASVIPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFRRGG-PLRKEAS 932 ++LP L + PS ++G + E HRS+GCEL+QEAGILLRLPQVVM TAQ LL RF+YRK L FDAF VA+ C+ LA K+EE P++ V+ VF+ MF RR + + + R ++ VE VL +LGF YN+ +HPHK++LYY+KVL + ++Q+AW Y+NDSLRTDL +RF+++VIACAAI++ASR E+ LP+ PPW+ALF+ + ++ + I+ LY + K+ +LEPL E + F P+ KE S Sbjct: 10 VVLPTSTLIHSPS--RDNG-IALNTEKLHRSFGCELIQEAGILLRLPQVVMATAQTLLHRFYYRKSLHQFDAFRVALSCLFLAAKVEEKPKRIHEVIGVFYAMFRRRKWKNTTVTQKLMDLNGPTFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVL--NGSSQLAQQAWGYINDSLRTDLCVRFKAQVIACAAIFLASRFQEVALPEDPPWYALFDVEKTQLYAVSIVIMELYKQEKLEWLEPLTEANPFAVDDCPVEKEVS 276
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A6A3UY25_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UY25_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.410e-66 Identity = 120/260 (46.15%), Postives = 169/260 (65.00%), Query Frame = 3 Query: 135 IILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPASV-----IPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIF 899 ++LP +L PS E E +E HR++GCEL+QEAG+LLRLPQVV+ TAQ LLQRFFYRK L FDAF VA+ C+ LA K+EE P++ R V+ VF+ M RR + + + R ++ VE VL +LGF YN+ HPHKF+LYY+KVL D ++Q+AW Y+NDSLR DL +R+ ++VIACAAI++ASR + LP+ PPW+ALF+ D ++ + I+ LY + ++ +LEPL + + F Sbjct: 10 VVLPASVLARSPSREDGVSEA---VERLHRAFGCELIQEAGVLLRLPQVVLATAQTLLQRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIRDVLAVFYAMLRRRKWKRSSVAQQLVDVDGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVL--DGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQHVALPERPPWYALFDVDKTQLYAVSVAIMELYKQERIEWLEPLTDTNPF 264
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: A0A8K1CU74_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU74_PYTOL) HSP 1 Score: 243 bits (621), Expect = 3.230e-66 Identity = 129/260 (49.62%), Postives = 174/260 (66.92%), Query Frame = 3 Query: 135 IILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVEPA---SVIPPES--LRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIF 899 ++LP IL PS + V E HR WGCEL++EAGILLRLPQVVM TAQ +LQRF+YRK L FDAF VA+GC+ LA K+EE P++ R VV VF+ ++ RR + ++ PES D ++ VE +L +LGF Y IM+HPHK+ILYY+K+L D ++Q+AW Y+NDSLR DL +R+R+EVIACAAI++ASR L++KLP PPW+ LF+ D + Q I+ LY R K+ +L+PL E + F Sbjct: 9 VVLPEAILARSPS---QQDGVSAHEERDHRFWGCELIEEAGILLRLPQVVMVTAQTMLQRFYYRKSLRDFDAFRVAIGCLFLAAKVEEQPKRMREVVSVFYAIYRRRKWGKTRMTQQLLEPESDSYYLWCDWLIMVERQILIDLGFSLYTIMEHPHKYILYYIKIL--DGSKALAQKAWGYLNDSLRVDLCVRYRAEVIACAAIFLASRMLQVKLPMSPPWFELFDVDETALLQASTVIMELYTRKKIVWLDPLTEVNPF 263
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Match: F0WDA4_9STRA (CyclinL1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDA4_9STRA) HSP 1 Score: 234 bits (597), Expect = 4.400e-66 Identity = 117/260 (45.00%), Postives = 169/260 (65.00%), Query Frame = 3 Query: 138 ILPRDILDNPPSGEHEHGEVPWEIESSHRSWGCELLQEAGILLRLPQVVMCTAQNLLQRFFYRKPLTAFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERR----IGVEPASV-IPPESLRALRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLKVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLEIKLPDHPPWWALFNADMQEMGQICNTILALYHRPKVGFLEPLCERSIFR 902 +LP +IL NPPS + + ++E HR WGCEL+QEAG LL+LPQVVM TAQ +L RF+YRK L FDAF V+ C+ LA K+EE P + ++ VF+ +++RR +E + + ++ RD M+ +E +L +LGF YN+M+H HK++LYY+K+L D +++Q+AW Y NDSLR DL RF + I C ++++A R L+IKLPD+PPWW LF +EM I IL LY R + +L+PL E + F+ Sbjct: 13 LLPEEILRNPPS---QRDGISSQVERDHRFWGCELIQEAGTLLKLPQVVMVTAQTILHRFYYRKSLRDFDAFRVSFACLFLAAKVEEVPTRISEILTVFYAIYKRRRWKETNIENQLLDLDGDTYCQWRDWMILLERQLLIDLGFSIYNVMEHAHKYVLYYIKIL--DGTKELAQKAWGYANDSLRVDLMTRFSAAAIGCGSLFLAGRVLQIKLPDNPPWWLLFEVSQEEMVTIAREILQLYTRNAIEWLDPLTEINPFQ 267 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6888.15648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6888.15648.1 >prot_L-elsbetiae_contig6888.15648.1 ID=prot_L-elsbetiae_contig6888.15648.1|Name=mRNA_L-elsbetiae_contig6888.15648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=506bp MANNSVATTLGQIPDDEAWHRTIILPRDILDNPPSGEHEHGEVPWEIESSback to top mRNA from alignment at L-elsbetiae_contig6888:2..6293- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6888.15648.1 ID=mRNA_L-elsbetiae_contig6888.15648.1|Name=mRNA_L-elsbetiae_contig6888.15648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6292bp|location=Sequence derived from alignment at L-elsbetiae_contig6888:2..6293- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6888:2..6293- >mRNA_L-elsbetiae_contig6888.15648.1 ID=mRNA_L-elsbetiae_contig6888.15648.1|Name=mRNA_L-elsbetiae_contig6888.15648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3036bp|location=Sequence derived from alignment at L-elsbetiae_contig6888:2..6293- (Laminarionema elsbetiae ELsaHSoW15)back to top |