mRNA_L-elsbetiae_contig6881.15641.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6881.15641.1
Unique NamemRNA_L-elsbetiae_contig6881.15641.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: D7G694_ECTSI (HHH_8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G694_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.180e-97
Identity = 169/226 (74.78%), Postives = 194/226 (85.84%), Query Frame = 3 
Query:  114 AVSKETLKILEERFGLKKK--KAAGKRKAE-----PKPAAASSPSGLDEVWDVSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMGSKE-DDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGSKAGGVYKKVVSAIKDMEEPLVKAPKKGQVPGIGAKTIEKIDEFLKTGKMQTLEDKRAESVM 767
            A+ K  LKIL ++FG+KK+  KA GKRKA+      KPAA SS S LDEVWDVS+KE+RK+ VAKLI+IAKARGVR+PED QAA MG+GT IMGSK+ D+K+KVKD VE L DK+G+DPAWVDP+D+ PKKKK+PS AKQC CPENKALADAFDELAGLYFK GSKAGGVYKKVVSAIKDM +PL  APKKG+VPGIGAKTI+KI+EFL TGK+QTLEDKRAESVM
Sbjct:   56 ALKKAALKILAKKFGVKKEQQKATGKRKADGGKGAAKPAAPSS-SALDEVWDVSTKEERKKYVAKLIEIAKARGVRIPEDAQAASMGVGTVIMGSKDADNKLKVKDAVEELTDKFGKDPAWVDPEDSGPKKKKRPSTAKQCTCPENKALADAFDELAGLYFKEGSKAGGVYKKVVSAIKDMPKPLTTAPKKGEVPGIGAKTIQKINEFLATGKIQTLEDKRAESVM 280
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A3M6VLR5_9STRA (HHH_8 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLR5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.430e-16
Identity = 63/209 (30.14%), Postives = 102/209 (48.80%), Query Frame = 3 
Query:  249 VSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYG------------------------------------RDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGSK-AGGVYKKVVSAIKDMEEPLVKAPKKGQVPGIGAKTIEKIDEFLKTGKMQTLEDKRAESV 764
            +SS+EK K+   +L+ +    GV++P D   A +  GT +  ++E+ + ++   ++ ++ K+G                                    + P  +D D+T   K KKP K  +  C  N+ LADAF EL+G  FK G K  GG + KV  AI+D +  L       Q+ G+G  +  KIDEFL+TG ++TLE+ RA ++
Sbjct:    1 MSSREKSKKAARELLALCAKEGVKIPTDPVNAAVEAGTMLNATREEGEFQLDAALKEMIIKFGVKKSPSPKKKTKKESKDDVKTEKKIGRKRTSDHMIDKKPEDMDDDET---KSKKPRKMAEATCKANQTLADAFVELSGFEFKRGEKFKGGTWAKVAKAIRDCDFILTCGKDALQLKGVGKSSAAKIDEFLETGTLKTLEEYRAGNM 206
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A1V9YLB4_9STRA (HHH_8 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YLB4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.620e-13
Identity = 59/183 (32.24%), Postives = 93/183 (50.82%), Query Frame = 3 
Query:  249 VSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYG-----RDPAWVDPDDTA-----PKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGSKAGGVYK-KVVSAIKDMEEPLVKAPKKGQVPGIGAKTIEKIDEFLKTGKMQTLEDKRAESV 764
            +S K   KE   +L++  K  G+R+P D   A +  G  +  + E D+      + ++  ++G     ++    D  D       P KKKKP+KA     PEN+ L++AF ELAG  FK G +  G+   +   +I+D EE +        + GIG  + +KIDEFLK GK++ LED R  ++
Sbjct:    1 MSKKIVTKEAANELLEKCKNEGIRVPTDHTNALIQAGIVLKTTSEKDEFNWDSALNAMTQEFGVLKIGKEHKTSDAKDEGKSELKPTKKKKPAKATN---PENQELSEAFTELAGFEFKRGERFKGMANSRAAKSIRDTEEKIESGDVAMHLKGIGKGSAKKIDEFLKNGKIEKLEDYRVGNM 180
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A7S3L535_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L535_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.500e-12
Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 3 
Query:  225 SGLDEVWDVSSKEKRKECVAKLIDI--AKARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGSKAGGV-YKKVVSAIKDM------EEPLVKAPKKGQVPGIGAKTIEKIDEFLKTGKMQTLEDKRA 755
            SGL+  W ++ K   K+ V  L+++  A A  + LPED + AR  LG+ I   +  DK  V++++  +V++ G        D  A   KK+ +    C  P+N  +     EL+ LY+K G++  G+ Y K V  +KD+      E  +     K +V G+G  T EK+ EFLKTGK++ LE+KRA
Sbjct:  288 SGLE--WKLTGKAGIKKAVGDLLEVLQAHANALDLPEDPKEARSKLGSLIQMHR--DK-SVEEIIPLIVEELG-----FKGDKDAKAAKKEAAVENICKNPKNVHIVSVIQELSELYYKEGNRNAGLSYSKAVMGLKDVDYEITSENAMSMCKGKTKVDGVGKGTAEKVTEFLKTGKIEKLEEKRA 463
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A6T8IRS6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8IRS6_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.890e-11
Identity = 62/180 (34.44%), Postives = 93/180 (51.67%), Query Frame = 3 
Query:  243 WDVSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKA-GSKAGGVYKKVVSAIKDMEEPLVKAPKKG------QVPGIGAKTIEKIDEFLKTGKMQTLEDKRAES 761
            WD+ SK+  K   +    I K  G+ LP D+  A+M +G  ++  +  DK  ++++   +V+ +G   A  D       K K  + A  C  P+N  + D+  EL  LYFK   + AG  Y KV +AIKD+   + +   KG      +V GIG  + EKI EF+ TGK+  LE+KRA S
Sbjct:  283 WDLFSKDGIKTAASGWSIICKKVGINLPPDKARAKMEVGKIVLQHR--DK-SIEEICTIIVENFGIKEAENDI------KAKNEAMASVCSIPQNGLIFDSIMELGKLYFKEKNTNAGLTYNKVGNAIKDLNFRITEENAKGLGKGKTKVTGIGKGSAEKIFEFITTGKIAKLEEKRANS 453
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: B5Y3H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3H9_PHATC)

HSP 1 Score: 77.0 bits (188), Expect = 2.620e-11
Identity = 61/183 (33.33%), Postives = 101/183 (55.19%), Query Frame = 3 
Query:  243 WDVSSKEKRKECVAKLIDIAK---ARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGSK-AGGVYKKVVSAIKDMEEPLVKAPKKG------QVPGIGAKTIEKIDEFLKTGKMQTLEDKRAES 761
            W ++SK+  ++ VA+L D+ +    + V LP+D  +A+M +G  I  ++E       +LV  +V ++G   + V     A   KK+ +       P+N  L  AF EL+ LYFK G++ AG  Y KVVSA+K++   + +   KG      +V  IG  + ++I EF+ TGKM+ L +KRA++
Sbjct:  289 WKLTSKDGLRKAVAELTDVVQKHEGKSVDLPDDIGSAKMKVGEVIARNREK---SAAELVPIIVQEFGFKESKV-----AKAAKKEAAMEIMVKEPKNLPLVAAFQELSELYFKEGNRNAGASYAKVVSALKELSYEVTEENAKGLGKGKTKVANIGKTSADRIFEFVCTGKMEKLIEKRADA 463
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A8J9X1U3_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X1U3_PHATR)

HSP 1 Score: 73.2 bits (178), Expect = 5.020e-11
Identity = 61/184 (33.15%), Postives = 100/184 (54.35%), Query Frame = 3 
Query:  243 WDVSSKEKRKECVAKLIDIAK---ARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVC-PENKALADAFDELAGLYFKAGSK-AGGVYKKVVSAIKDMEEPLVKAPKKG------QVPGIGAKTIEKIDEFLKTGKMQTLEDKRAES 761
            W ++SK+  ++ VA L D+ +    + V LP+D  +A+M +G  I  ++E       +LV  +V ++G        +  A K  KK +  +  V  P+N  L  AF EL+ LYFK G++ AG  Y KVV+A+K +   + +   KG      +V  IG  + ++I EF+ TGKM+ L +KRA++
Sbjct:   48 WKLTSKDGLRKAVAGLADVVQKHEGKSVDLPDDIGSAKMKVGEVIARNREK---SAAELVPIIVQEFGFK------ESKAAKAAKKEAAMEIMVKEPKNLPLVAAFQELSELYFKEGNRNAGASYAKVVNALKQLSYEVTEENSKGLGKGKTKVANIGKTSADRIFEFVCTGKMEKLIEKRADA 222
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A7S2JWB5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWB5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.630e-11
Identity = 59/181 (32.60%), Postives = 98/181 (54.14%), Query Frame = 3 
Query:  243 WDVSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKAGS-KAGGVYKKVVSAIKDME----EPLVKAPKKGQ--VPGIGAKTIEKIDEFLKTGKMQTLEDKRAESV 764
            +D++S +  K  V++ + + K   V +P DE+ A+  +GT I+  K    +   ++ E +V K+G   +  + +      ++K + +  C    N  L +AF EL  LY  AG+  A   Y KV +AIKD+E    E   K+  KG+  VPG+G  + +K+ EF+ TG +Q LE+KRAE+ 
Sbjct:  316 FDLNSSDGIKAAVSEYLQLCKDMDVDVPPDERDAKRAIGTLIISDK---SLTAAEIAEEVVKKFGIKKSEEEIE------QRKNAISSICANSANGPLYEAFLELGQLYSAAGNWNAANTYNKVCAAIKDLEFEITEGNAKSLHKGKTKVPGVGKGSADKMYEFVTTGTIQKLEEKRAETA 487
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BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A8K1FHF1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHF1_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 1.180e-10
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 3 
Query:  513 VCPENKALADAFDELAGLYFKAGSK-AGGVYKKVVSAIKDMEEPLVKAPKKGQVPGIGAKTIEKIDEFLKTGKMQTLEDKRAESV 764
             C +N+ LADAF EL+G  FK G K  GG + KV  AI+D +E +    +  ++ GIG     KIDEFL+TG ++TLE  RA ++
Sbjct:  136 TCEDNQELADAFAELSGFEFKRGEKFKGGTWSKVAKAIRDHDEKISSGKQAQKLKGIGKSAAAKIDEFLETGTLETLEQFRAGNI 220
[Close]
BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Match: A0A7S1D470_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D470_CYCTE)

HSP 1 Score: 72.8 bits (177), Expect = 5.330e-10
Identity = 61/198 (30.81%), Postives = 101/198 (51.01%), Query Frame = 3 
Query:  198 PKPAAASSPSGLDEV-WDVSSKEKRKE---CVAKLIDIAKARGV-RLPEDEQAARMGLGTTIMGSKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPENKALADAFDELAGLYFKA-GSKAGGVYKKVVSAIKDMEEPLVKAPKKG------QVPGIGAKTIEKIDEFLKTGKMQTLEDKRA 755
            PK  A +     DE+ WD+ S   + +    V  L+ +  A  V +L   E    MG+G  ++GSK       K++++++V+++G        D  A K+K+  + +  C    N  L +AF EL+  YFK   + AG  Y+KV +AIKD++  + +   KG      +V  +G  + +K+ EF+ TG M  LE+KRA
Sbjct:  242 PKTGAQALLDKADEIEWDLPSNANKPQIQAAVKALVGVLSADDVPKLSIPEGKETMGVGKIVLGSK---GKSAKEVMQAIVERFG-----FAEDKAAAKEKRSAAMSSVCANAANAGLMEAFLELSNFYFKEKNANAGATYRKVANAIKDIKFEITEDNAKGLGKGKTKVANVGKSSADKMYEFVTTGTMVKLEEKRA 431
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6881.15641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G694_ECTSI1.180e-9774.78HHH_8 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A3M6VLR5_9STRA4.430e-1630.14HHH_8 domain-containing protein n=1 Tax=Peronospor... [more]
A0A1V9YLB4_9STRA1.620e-1332.24HHH_8 domain-containing protein n=1 Tax=Thraustoth... [more]
A0A7S3L535_9STRA8.500e-1233.87Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6T8IRS6_9STRA1.890e-1134.44Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B5Y3H9_PHATC2.620e-1133.33Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A8J9X1U3_PHATR5.020e-1133.15Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A7S2JWB5_9STRA6.630e-1132.60Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8K1FHF1_PYTOL1.180e-1044.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1D470_CYCTE5.330e-1030.81Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6881contigL-elsbetiae_contig6881:1377..8026 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.8
Seed ortholog evalue1.4e-82
Seed eggNOG ortholog2880.D7G694
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Helix-hairpin-helix domain
EggNOG OGs2AS0J@1,2RZNP@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDNA polymerase family X lyase domain
Ec32 orthologEc-10_001030.1
Exons9
Model size1649
Cds size696
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.4906316-UTR-L-elsbetiae_contig6881:1376..14501622816761.4906316-UTR-L-elsbetiae_contig6881:1376..1450Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6881 1377..1450 +
1691683793.649523-UTR-L-elsbetiae_contig6881:1376..14501691683793.649523-UTR-L-elsbetiae_contig6881:1376..1450Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6881 1377..1450 +
1622816761.6146126-UTR-L-elsbetiae_contig6881:7147..80261622816761.6146126-UTR-L-elsbetiae_contig6881:7147..8026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6881 7148..8026 +
1691683793.7702632-UTR-L-elsbetiae_contig6881:7147..80261691683793.7702632-UTR-L-elsbetiae_contig6881:7147..8026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6881 7148..8026 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.5077872-CDS-L-elsbetiae_contig6881:1450..15131622816761.5077872-CDS-L-elsbetiae_contig6881:1450..1513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 1451..1513 +
1691683793.664161-CDS-L-elsbetiae_contig6881:1450..15131691683793.664161-CDS-L-elsbetiae_contig6881:1450..1513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 1451..1513 +
1622816761.5206451-CDS-L-elsbetiae_contig6881:2370..24721622816761.5206451-CDS-L-elsbetiae_contig6881:2370..2472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 2371..2472 +
1691683793.6759994-CDS-L-elsbetiae_contig6881:2370..24721691683793.6759994-CDS-L-elsbetiae_contig6881:2370..2472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 2371..2472 +
1622816761.5312521-CDS-L-elsbetiae_contig6881:3004..30941622816761.5312521-CDS-L-elsbetiae_contig6881:3004..3094Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 3005..3094 +
1691683793.6893733-CDS-L-elsbetiae_contig6881:3004..30941691683793.6893733-CDS-L-elsbetiae_contig6881:3004..3094Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 3005..3094 +
1622816761.5417256-CDS-L-elsbetiae_contig6881:3671..37581622816761.5417256-CDS-L-elsbetiae_contig6881:3671..3758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 3672..3758 +
1691683793.7091787-CDS-L-elsbetiae_contig6881:3671..37581691683793.7091787-CDS-L-elsbetiae_contig6881:3671..3758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 3672..3758 +
1622816761.5530784-CDS-L-elsbetiae_contig6881:4315..44081622816761.5530784-CDS-L-elsbetiae_contig6881:4315..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 4316..4408 +
1691683793.7187243-CDS-L-elsbetiae_contig6881:4315..44081691683793.7187243-CDS-L-elsbetiae_contig6881:4315..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 4316..4408 +
1622816761.5675442-CDS-L-elsbetiae_contig6881:5212..53111622816761.5675442-CDS-L-elsbetiae_contig6881:5212..5311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 5213..5311 +
1691683793.729597-CDS-L-elsbetiae_contig6881:5212..53111691683793.729597-CDS-L-elsbetiae_contig6881:5212..5311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 5213..5311 +
1622816761.5781453-CDS-L-elsbetiae_contig6881:6163..62141622816761.5781453-CDS-L-elsbetiae_contig6881:6163..6214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 6164..6214 +
1691683793.7397325-CDS-L-elsbetiae_contig6881:6163..62141691683793.7397325-CDS-L-elsbetiae_contig6881:6163..6214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 6164..6214 +
1622816761.5897777-CDS-L-elsbetiae_contig6881:6728..68091622816761.5897777-CDS-L-elsbetiae_contig6881:6728..6809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 6729..6809 +
1691683793.7515264-CDS-L-elsbetiae_contig6881:6728..68091691683793.7515264-CDS-L-elsbetiae_contig6881:6728..6809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 6729..6809 +
1622816761.6010919-CDS-L-elsbetiae_contig6881:7117..71471622816761.6010919-CDS-L-elsbetiae_contig6881:7117..7147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 7118..7147 +
1691683793.7603726-CDS-L-elsbetiae_contig6881:7117..71471691683793.7603726-CDS-L-elsbetiae_contig6881:7117..7147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6881 7118..7147 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6881.15641.1prot_L-elsbetiae_contig6881.15641.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6881 1451..7147 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6881.15641.1

>prot_L-elsbetiae_contig6881.15641.1 ID=prot_L-elsbetiae_contig6881.15641.1|Name=mRNA_L-elsbetiae_contig6881.15641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
MAIGAAEEKKAMKAVSKETLKILEERFGLKKKKAAGKRKAEPKPAAASSP
SGLDEVWDVSSKEKRKECVAKLIDIAKARGVRLPEDEQAARMGLGTTIMG
SKEDDKVKVKDLVESLVDKYGRDPAWVDPDDTAPKKKKKPSKAKQCVCPE
NKALADAFDELAGLYFKAGSKAGGVYKKVVSAIKDMEEPLVKAPKKGQVP
GIGAKTIEKIDEFLKTGKMQTLEDKRAESVM*
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mRNA from alignment at L-elsbetiae_contig6881:1377..8026+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6881.15641.1 ID=mRNA_L-elsbetiae_contig6881.15641.1|Name=mRNA_L-elsbetiae_contig6881.15641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6650bp|location=Sequence derived from alignment at L-elsbetiae_contig6881:1377..8026+ (Laminarionema elsbetiae ELsaHSoW15)
AGGGAAAGGAGGAGAGCATCTCAGAGGTTGCTGACGCCTTCGACTCTGCC
GGCACGGTGACCTCCCAGCCGAAGATGGCCATCGGCGCGGCTGAAGAAAA
GAAAGCCATGAAAGCAGTCTCCAAAGAAACCCTCAAGGTGCAAAAAACTT
GGGCGCTTCTTCATAGGCAGCAGTAGTTACACATATAGCGCATTTTTCGC
AGAGGTTTTGAGAAAGTTGCTGCATGGTGTAGCGTGCACGTGACTCTGCG
AGTGGGTTAAGTGGTGCAGTAGTGAAATATTGCAAAGCGACCTTTTGCCG
AGGCTTAATTTATGCATGCATTTGTATTTATTGTATTTTTTTCTCCGTCA
ACCACAAGACATTATATTTCTAGCCAACGCACGATTGGAGGGGGGGGGGG
GGGGGGGGGGGCTCAGCAAGCGCCAGCATGTACATACATACATGTGAAAT
CGAAGCGTTTCATGAAAGGGAGTATAGAAGTATGAGAACTAAAAACGATC
GAAGACTGCCGTTTTGTGCAGCGCCTCCCCCGTTTTTTCGGACGCAACAC
CTTTCGGGGGATCACCTAGACGTAAATGCCTTCTGGCCATCGAAACGGAA
TCGATGGGACACCATCTCAATGGAATCGATGTTTACGCCCAAGGTGCTGG
AGGCTCGGCTCGAGGTAGCCTTCGTCTCTTTGGTGCCGCCACAAGATGTT
TTTGCTCTGCCTGAAAACAGCGAACCTACTGCCGGGACCAATTTCCAAAT
GCCAAGCGTCGCCGGGCCTGTCCCTGCTTCGGAGCTCGCCGAATATTGCT
CCGAGATTGTACCATTTTAAGTCCTTCTGCGTGGTCTTCGTAGCCTCTCG
TTGCTTGTCAGGTCAGAGTCCCGCCACGGGTTGCCGCAACGTGGTGTCGA
TTCTAGACCGCTCGTTCCGTTTTTTTTTTCGGTTCCCCTGCACGCCATTG
CTCGACGCACCTTCACCCGTTTCCATGTGTACCGGGCGCACCAGATCTTG
GAAGAAAGGTTCGGCTTGAAAAAGAAGAAGGCCGCGGGCAAGCGGAAGGC
GGAACCCAAGCCGGCAGCAGCCTCTTCCCCTTCTGGTCTTGATGAGGTGA
AAAGTACCATTTGGACAACTATCTCCGTGAAATCGTTTTTTCTCTTGGGG
CTTATTGTAGCTCGTCTCTTTTTCTATTTAAACCTGATATTTCGTTGCTT
ATTTATTCATGCGCGACATTCTGATGTTGGGAAATACATGCACACAGAAT
GCCTCTGTCTGTGGTTGGACTCTTAAAGGCGGAGCTACCGGTGTTGCCTT
GATTCCGGTTCTGAGTTGGGTTGGTGCATCGGCAACATCGGAGAAACTGC
GTGCATGGCATATGGCGCGATGATCACGCCACAACTTTTTAACATTGCTG
GGCTTTGTCTCTCAGCCCCCCTTGCTGCCTGGCCCGAAGAAAGCCCCGAT
ACCAGGGTGCGAGGGTGCATACTATGCCGCTTCTCCTTTCCACAACAGTA
GCGTGGGATTAAAACCAGTGTTATCACCTCCCATAGCTGTCGGTGTTTGG
CCACTCTTCCCACACACTCATTTATCCCTTGATCGGTCAATCAATCAGTG
CCCACCCTGGTTCGTTGATTTCCCGCAGGTGTGGGACGTGTCGAGCAAAG
AGAAGCGCAAAGAGTGCGTGGCCAAGCTCATCGACATCGCCAAGGCCAGA
GGCGTCAGGCTGCCAGAGGTGAGGAGAGAGGGGTCAAGGCGTTGGATGAT
GGGCTTTTCGAGGATCGTGTTGAATTGCTCTGTGTCATGTGTACGGAATA
CCCTTTTTCGCGGGACCCCAAGATCGCGACCACCTACCGCCGTCCCTTCG
CTGGCCCCCTTCTCGTCTGTCCAGTCGGAGAGTTCAGTGCGCACACGAAC
GCCTTCTCTGCTTGTTTGATTAAACACATGATAACTCCGCCTGAGTGTGC
TCAGTCTAGTCGAGCCTATGTAGTCTCCCGCTCTGCCCCCTCTCGGGGAC
GGCATGCTTCATGCTTCGTATGTACGTACGGCAGCCGGGGCATTGATATC
CATCCACCGCGTGGCCTCACCTCAGCAAGAGTCACTTTTTCACGTCGTCG
CGCCGAAGGTGCGGGGCTCCGCCGTGCTGCTGTTCGTTTTTCTGCAGTAG
AGTGAGCTTGAATTTCTCGTCGCCGTAACTCTGTGGTCTCTCTTTCGTTG
TGCATGTCTTAGATGCCGGATCTGGTGCTCATGATTCTACCTCTCCCCTG
TGTCGTGCTGTGCCTTTGGCGGGGAATGGGTGTGTTTGGCGGCAGGACGA
GCAAGCCGCGCGCATGGGCCTGGGCACCACGATCATGGGATCCAAGGAAG
ACGACAAAGTCAAGGTCAAGGACCTCGTCGAGGTAATGTAAGGTCAAGCC
TCCAGCGCCGTCAAAACTCGTCTCCGTCCCGTTTCAATCCCACACGCTGA
GCTGCTGTAACCCGTTGGCTACATACATAATTCTTCGAAAGGCGTGAGAA
CAAGCAAGGGCGCCCTGCGCAGTAGACGAAGTTTTTGGCGCGCGTTTTTC
TGTTACTTTTTTTTGTGACGTCACGGAGCATGTACCGTACACGGTGGGCA
CTTGCTCGTGAGGTGCCGATAGACGCATCAGTACTGCACGGCACGGGGTA
GCGTGTATATCTCCTTCAGCACGTTCCCGTGGACAGGGGCAAGACCTCCC
CCGGCTCGCCTTTGAACACGTACGGTACGTTACGATACCATACCTCATAA
CGCAACCCAGCCCCTCGAAAGGAAAAACGATGGGGTGCTCACAGGTCACC
GGGACCCGAAAAACGTTTTTTAAGCCTCCCCGCCCCGTGTCTCCTGCCCC
CCCCCCCTCCCCCTCCTGCCCCCCCGTCTGCTTTCCGAATGTAAAACCTG
TTGGCTGAAAATGGCTGACATTGCGTGGTGTCATGACAGTCCCTCGTCGA
CAAGTACGGGAGAGACCCGGCCTGGGTGGACCCTGACGACACAGCGCCCA
AGAAGAAGAAAAAGCCCAGCAAAGCCAAGCAGGTGGGTGCGGCGATGTTG
GTCTGGGTCTTCTTCTGTCTGTTGACCAATCAATACCTTGAGCTGCAGAG
ATCGAGATATTGAATATTTATACATCCCGGTACCATGTCAAAGGGAGATG
AAGTGTTTTTGGGGGTCTTTTTGTACCAGCCTTTGATGCGTCACCCACCA
CTCTGTGTAGGGGTGTGCGTTGTTGTATTTGTTGCATTTCCACGATTTTA
TTTGGGAGGGTTCTTCCGACTGCGTCCGAGCGCCCATGGTTTTCTTCGTC
ATCACCGCCCGATGTGACAAATGTGCTCAATCGAGGGGTATGTCGAGGTG
TGGTAGTTTTGGCGGCTTCCGATGCTGGTGCTCGCGATGAGGGATAATTG
CTACAGGCTGGGTCACGGACAACGCTTACCGGGTGCTGTTGTGCACAGGC
GGTGGGTGTTAACTGGTCGTTGCGTTTACTTCTACTTCGTACATGTATAT
CTACAGCACAGCAGAGAACCAACCCTATTATGATTGGCGGCTTGGATGGA
CCTCGATCTGAATAAAAGAGCACTACGATATTTAGTGTTCAACTGTCGGC
GCAACACAGTAGTACTCTCTGATATCTGCGCGTATACATGCCAGCTCGGT
CGGCCGGCACGCGGATTCGTGGTGCAAGAGGCGGGGCTGGGGCGTCACGA
TAAGGCCGTCCGTCTGCTCGTCCTTCTCTCTCCCCGTTAACCTTACCACC
CCCACCCACGTTCTCGCCCCCCTCAACCCCCTTGGCTGTATAATTGCGTC
TTTACGTACACGACTGCAACTGTATATATGCTTTAGTGCGTCTGCCCCGA
GAACAAGGCCCTGGCTGACGCGTTCGACGAGCTGGCGGGACTGTACTTCA
AGGCGGGGAGCAAGGCTGGCGGCGTCTACAAGAAGGTACGCGCGCGTGTT
TGTGGGTGTGTGTGAGTGTGGGTGCTCAATCCGGGCGTTGCTTCGCCCTG
GAAAAACGGTCTGTTTGCGTTGGAGACCTTCCCGGCAAAGCCAATTCAAG
CAAGCTCCCACCTACATATAAAAAGTATATACGTGATCCTTGACACAACT
CGGTGGCACGCAACCGAATTGAACGGCCCCTCTCTCCTCCACTGTAACAG
CATGCCGTCCAGGATCCTTCCCATAACCCCCTCAGTTAGCACGAGACCGC
TGCTGTAGAGTATTATGCTCGGAAGACAAAGAAACCCAGGATAAAAAAAA
TTGCCCCTCAAATATTTGGTATTTACCTGTCCGAGAATGGTGTACCGATG
TGTTGGGCGAGAAGAGAGAAAGCCATTTTTTTTGTTAAATGAAGATAAAG
TAGTCAACCGATCTAAATAGGAGTTTTTTTGAGTACGGGTATTTCCGTTT
TGTTCAGTGGACCAGCTTGCCGATCTGTTGCCAATACTCCGTTGGTGCAA
AGACTGTCTTCAATGGATTGTTTGTGGGCCCCGTGTTTGCTGTTGTCTCC
CCCCCCCCCTCTGGGGCTAGCTCTGTCTTGCGTGTCTGTCTATTTTGGGT
TTTCACTCGTCCGCAGAGTGGAAACACGAAATAACGAACGCCTTGGTTGG
TACAGGATCAAGGGCGGGGGAATAGTCTTGGATGCCCTTGGTGCTTGGCA
GGTAAATAGACAAAACCTTTTTGTGGCGGAGCTGGCGCCTTGGATACTGA
GACCCTGAACAATGTATTATATTCTCCGTATGTACCCCTGCGCACTTACC
GCCCCCCCGCCGCGCGCTGGGATGACTAAATATTTAGGTGGTTTCCGCCA
TCAAAGACATGGAAGAGCCGCTGGTGAAGGCCCCCAAGGTGAGGGCGTGT
AGAGTACAGTAGACGATTCCTCGCTTTCTTCCCATGCTGTCACACGGGGA
TATTATTGTTCCGATTTTCTCCGTGCACGTTTGTTGCATGTCGACTTGTC
CACTTGGGTCCGTCCATTGCAGGGACACGTGGCTGTGCTGACATGATGCT
CTGACGTCGTTAGATGGATACGTCGCGTCTAATGTAGTTCACCCTGGATG
CCTGCCCGGAGACAGCCGCACAAGGCGCCAGTGTTGCCTGTTCCGGGACT
CCTGACCCTGTCACTGGCTGTGTGCTTTTTGCGAGATGGACTGATTGGAT
CGGAGAAACACGCGTTGGTACATACCTATCAGATCGGTTAAACGAGCAGC
GTGCTTTGTGTCCGATCTTACCAGAAACCACCAGAAGAAACAAGTTCGTG
GCGGCAGCCTTTGTTCTTGCCAATTCTCCGCCTGAAGCTCGTAGTCAACC
CAAGTCGTCGCGCGGTTCTTTCGCGCTTGTCTTTTGCCTCCGTCGAGCGC
AGAAGGGCCAGGTTCCCGGCATTGGCGCCAAGACAATCGAGAAGATTGAC
GAGTTCCTCAAGACGGGCAAGATGCAGACGCTGGTGGGTCGAGGCATGCG
TGTTGAACCCCCCGTACCGCGTACCACCACCCCGCATGGCCTCCAAAACT
GCCGCGGAGTTCGACTTCTCCGGCTGTGCTGCTCTGTTTCGTGCTTAGAA
CGCCACCACCGTCGTGCTTTTCTGCTATTTCTCTCGTTCCAGTCCTCATC
TGGACGTCTACTGTGTGGGCGCTCTCTTCTGGCCGGCGCCTTGTAACAAC
AGTTGCTTAACGTTTCTAAATTTGCGTCATCTTGTTCCTAGGTCTAAATA
AACCCCATGCTGCCCCGATGCTTGACCTCGACAAACCGCAGGAAGACAAG
CGCGCAGAATCGGTCATGTAGGCGGGCGGATGGACCGGTGGGTGGCTTCG
GCTCCTCTTCTGATGCGAGAAGGCAGGCGGCGTGTGTGCATGCGAGTGCA
TGCGGGAAAGCGAGAGTCTGTTGGGATTGGACGGTCAGCGAGTGGTCTAC
GATACTTTTCGCTCTCACCCGCCCTGTGTGCTAGTTGGAAGATTTAGATA
CGAAACTGTACATTATTGACAGGCTTATTGCGCCAATATTTTTGTGGTGC
CTGGGCTGAGTCTAGGTGACGAGGCTGTGTGTGGCGTGTTCGGTCCCAGG
GAAGAGTGGATGATGTTTTGGCCTTCTCTTGGCCATACAGTAGTAGTCAG
TAGTGTAGTGGCGAATACGCCGGTTGATGGCAAAGAGTGTCGAGGAATCT
CCGCATTCTTTCTACATCAGACAAGCCACAGCCTGACCCGGCTGGCAGGC
ATTTATTATTGTAGGTTGTTGTGCCGTTCGGCGTGCGAACTCATTTTGTG
TTTTTTCTTTGGAGCGCTATATGTATTGTAGTGACGATGTATTTTTATGT
GTTTGCTCGAGCGCTGTGTGGCACCTTGCAGGCGGTCGTGGTCCATGCAG
TCAGTGTGGGCCATTTTCCCTGCTGGAGGCTGGTGGTATTGGCCTAATCA
TGTGTTGTCTTGTTTATTTTGTTTCCGATCATCAAATCTATAGTTAGTAG
TTGGTCTTGGAGTTGTTTGGGGGATGGAGAGAGGAGACAGACTGCTCTCT
TTCTTCACTGGCGGCGCTGGGGACCTGGGTATTGAGGACTGTCTTGTCCT
GAGCATTCTAGCACCAGGAGTCACGTCGGCAGTTTGCATGTCGACAAGAA
CCACGATTGATTTTTTCGTTCGCGTGATTCAGAGAGCGAATGTTCCGCGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6881:1377..8026+

>mRNA_L-elsbetiae_contig6881.15641.1 ID=mRNA_L-elsbetiae_contig6881.15641.1|Name=mRNA_L-elsbetiae_contig6881.15641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig6881:1377..8026+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCATCGGCGCGGCTGAAGAAAAGAAAGCCATGAAAGCAGTCTCCAA
AGAAACCCTCAAGATGGCCATCGGCGCGGCTGAAGAAAAGAAAGCCATGA
AAGCAGTCTCCAAAGAAACCCTCAAGATCTTGGAAGAAAGGTTCGGCTTG
AAAAAGAAGAAGGCCGCGGGCAAGCGGAAGGCGGAACCCAAGCCGGCAGC
AGCCTCTTCCCCTTCTGGTCTTGATGAGATCTTGGAAGAAAGGTTCGGCT
TGAAAAAGAAGAAGGCCGCGGGCAAGCGGAAGGCGGAACCCAAGCCGGCA
GCAGCCTCTTCCCCTTCTGGTCTTGATGAGGTGTGGGACGTGTCGAGCAA
AGAGAAGCGCAAAGAGTGCGTGGCCAAGCTCATCGACATCGCCAAGGCCA
GAGGCGTCAGGCTGCCAGAGGTGTGGGACGTGTCGAGCAAAGAGAAGCGC
AAAGAGTGCGTGGCCAAGCTCATCGACATCGCCAAGGCCAGAGGCGTCAG
GCTGCCAGAGGACGAGCAAGCCGCGCGCATGGGCCTGGGCACCACGATCA
TGGGATCCAAGGAAGACGACAAAGTCAAGGTCAAGGACCTCGTCGAGGAC
GAGCAAGCCGCGCGCATGGGCCTGGGCACCACGATCATGGGATCCAAGGA
AGACGACAAAGTCAAGGTCAAGGACCTCGTCGAGTCCCTCGTCGACAAGT
ACGGGAGAGACCCGGCCTGGGTGGACCCTGACGACACAGCGCCCAAGAAG
AAGAAAAAGCCCAGCAAAGCCAAGCAGTCCCTCGTCGACAAGTACGGGAG
AGACCCGGCCTGGGTGGACCCTGACGACACAGCGCCCAAGAAGAAGAAAA
AGCCCAGCAAAGCCAAGCAGTGCGTCTGCCCCGAGAACAAGGCCCTGGCT
GACGCGTTCGACGAGCTGGCGGGACTGTACTTCAAGGCGGGGAGCAAGGC
TGGCGGCGTCTACAAGAAGTGCGTCTGCCCCGAGAACAAGGCCCTGGCTG
ACGCGTTCGACGAGCTGGCGGGACTGTACTTCAAGGCGGGGAGCAAGGCT
GGCGGCGTCTACAAGAAGGTGGTTTCCGCCATCAAAGACATGGAAGAGCC
GCTGGTGAAGGCCCCCAAGGTGGTTTCCGCCATCAAAGACATGGAAGAGC
CGCTGGTGAAGGCCCCCAAGAAGGGCCAGGTTCCCGGCATTGGCGCCAAG
ACAATCGAGAAGATTGACGAGTTCCTCAAGACGGGCAAGATGCAGACGCT
GAAGGGCCAGGTTCCCGGCATTGGCGCCAAGACAATCGAGAAGATTGACG
AGTTCCTCAAGACGGGCAAGATGCAGACGCTGGAAGACAAGCGCGCAGAA
TCGGTCATGTAGGAAGACAAGCGCGCAGAATCGGTCATGTAG
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