mRNA_L-elsbetiae_contig688.15636.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig688.15636.1
Unique NamemRNA_L-elsbetiae_contig688.15636.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 3.760e-185
Identity = 271/332 (81.63%), Postives = 283/332 (85.24%), Query Frame = 1
Query:    1 DPFGHCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            DPFGHCSD VKRGDYDGYLYSLLQG QLR                     PA+LAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKD++AD+F GEPPPLPVALALAE VANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYL LELAGVRAGAG            VGKA GICTLLRS+ALPPPPAA + GS GF+ESCVLPS+VMR+FLLRHAVLERGPQDD EAHALAECVF VASVAKGH+EAAEE LAAAREE GGKLPAGAFAALLPGVRVAWYLETLQ  GFNAFDESLRPQSP +FQLRLGRAVI+EKF
Sbjct:   13 DPFGHCSDVVKRGDYDGYLYSLLQGAQLR---------------------PASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVFVGEPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAVITEKF 323          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.750e-72
Identity = 144/338 (42.60%), Postives = 193/338 (57.10%), Query Frame = 1
Query:    4 PFGHCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEP-------PPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            P  HC+D V++ DYDGYL SLL  P+  +                    P+ LA+RAFNVE A+IK++VR N   G MRMQWW D +  +++G         PP PV +AL +AV  Q+ GLTRRW +R++ AR  +L+     ++ ++ETYAE+TASSLLYL LE AGV                 +GKAVGICTLLR           A+      +  VLP +++RK L+   VL  G + + EA ALA C ++VA VAKGH+E  +E  +    +A        F ALLPGVR AWYLE L+ +GFNAFD SL P+S + FQ R+ RA ++ KF
Sbjct:   35 PDQHCADIVRKADYDGYLCSLLATPRTAR--------------------PSLLALRAFNVEIASIKEAVRNNTRSGTMRMQWWMDVVNAVYSGGNGGDARVLPPEPVCVALNQAV--QQHGLTRRWLERMIAARRHELEAPGWTSIADLETYAEHTASSLLYLSLEAAGVA------DERAEHAAGHIGKAVGICTLLR-----------AVQHHSAQKLSVLPGQLLRKHLVASTVLFNGARTEAEAEALAACFYDVACVAKGHMEQGQELASGLSNDA--------FRALLPGVRAAWYLEALEKAGFNAFDASLTPRSWIPFQFRVARAAMTHKF 325          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.040e-63
Identity = 137/326 (42.02%), Postives = 175/326 (53.68%), Query Frame = 1
Query:    1 DPFGH---CSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRL 969
            DP  H   C + VK+ D+D YL  LL     R+ +                      A+RAFNVETA IKD  RGN +PG+MRMQWW++ ++ I+ G+ P  PVA AL EAV  Q   LTRRW DR+L+AR  DL   QP  +EE+E YAENTASSLLYL LE   VR                VG+A GI T+LR+                  +S  +P E+ R+F +    + RGP+    A AL++  FEVA+ A  H+E A E LA+    + G L      ALLP VR   YL+ LQ +GFNA D+ L P+S L FQLRL
Sbjct:   21 DPANHGQYCVELVKQHDFDAYLCGLLVPRSSRRAY---------------------FALRAFNVETALIKDVARGNTLPGQMRMQWWREVISAIYQGKSPAHPVARALCEAV--QAHNLTRRWLDRLLEAREGDLGNIQPTRMEELEDYAENTASSLLYLTLEALHVR------HPTADHAASHVGRATGIATVLRATKF-----------HAAHQSLYVPLEIQREFKVNVNDILRGPESPEAAQALSDMFFEVATQAHLHMEHAREMLASPPPSSSGPLSRNTITALLPAVRTTMYLKALQKNGFNALDQDLLPRSHLEFQLRL 306          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A8K1C5K0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5K0_PYTOL)

HSP 1 Score: 163 bits (413), Expect = 2.370e-44
Identity = 120/332 (36.14%), Postives = 165/332 (49.70%), Query Frame = 1
Query:   13 HCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEP----PPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            H  + V++ DYD Y+  LL     R  F                      AIRA N E A++KDS+R N   GK+RMQWW++++ ++++       P   +  AL++A+ + +  LTRRWF+R+LDAR  DLD  QP TL E+E YA+ TA+SLLYL LE  GVR GA              G AVG+ TLLR       P   A           LP +++ K  L +   E   QD  E   LA  VFEVA +A  HL A+ E     R+     +P  A  ALL  V  + YLE L+   FN FD SL  +SP++  L++ +     K+
Sbjct:   32 HLREAVRKFDYDHYVCGLLFPQDKRSSF---------------------FAIRAMNAELASVKDSIRSNPATGKIRMQWWRENIYNLYSPRATRAVPETMLLRALSKAIDDHE--LTRRWFERLLDARDEDLDTDQPHTLHELEVYADKTAASLLYLTLECLGVRDGAADRAAGH------AGVAVGLTTLLRGT-----PYHLA------HNQLYLPEDLLLKHDLTNEHFEAASQDPAEGKKLAPVVFEVACLALEHLRASRE---LTRD-----VPKEARPALLSVVSSSMYLEQLERVNFNVFDPSLMQRSPMQLHLQVLKNYFLRKY 315          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A8H7S3B4_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S3B4_9FUNG)

HSP 1 Score: 154 bits (390), Expect = 5.150e-41
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 1
Query:   13 HCSDTVKRG-DYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKF-LLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLR 936
            +C+D+V+R  DY+GYL            + RH R          DV     AIRAFNVE A+I++SV  N   GKMRMQ+WKD++  I+ G PP  P+ALAL  A+   K  L+  WF R+++ RM +LD  Q  T+ +METY+ENTASSLLYL LE  G++                +GK +GI T LRS+                 +  VLP+++  K+ + +  V  +G  + +E     + VFEVA+ A  HL  A   L         K+P+ AF  +L  +  A YLE L+ + FN FD SL+
Sbjct:   36 YCTDSVRRQRDYEGYLCVPF--------YPRHLR----------DV---EYAIRAFNVELASIRESV-SNPNTGKMRMQFWKDTIDKIYKGNPPQQPIALALDAALKQSK--LSSLWFKRIINERMTNLDDHQFMTISDMETYSENTASSLLYLQLESLGIK------DVNADHAISHIGKMIGITTFLRSLPF-----------HLSQKRMVLPAQITAKYNISQEEVFRKGHVEGME-----DAVFEVATAANDHLLTARSMLT--------KVPSDAFPVVLSAIPTARYLEKLEATNFNVFDTSLQ 291          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A5D6XXS5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXS5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.090e-40
Identity = 122/338 (36.09%), Postives = 163/338 (48.22%), Query Frame = 1
Query:   13 HCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVAL------ALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLE----RGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            H  + V++ DYD Y+  LL    +R                     PA  A+RA N E A IKD++R N   GK+R+QWW++ +  ++  EP  L V         L +A+++    LTRRWF+R+LDAR  DLD  QP+ L ++E YAE TA+SLLYL LE  G+R                 G A+G+ TLLR       P  +AL      +   LP E+M    LRH V         +D  +   LA  VF+VA  A  HL AA E          G LP  A AALLP V  A YLE L+   FNA+D SL  +S L F + + +     K+
Sbjct:   31 HLRELVRKLDYDNYVCGLLLPQSVR---------------------PAYFALRAANSEIATIKDTIRSNQATGKIRLQWWREKIYGMY--EPYSLRVPQETFLLRGLEKAISDHD--LTRRWFERLLDARDEDLDTDQPQELWKLEDYAEKTAASLLYLTLECLGIR------DESADRVASHAGIAIGLTTLLRGT-----PHHSAL------QQIYLPDELM----LRHNVTADDHFEASEDPAKGAKLAPVVFDVACRAMEHLRAARELQ--------GALPKEARAALLPVVSTALYLEKLEHVNFNAYDPSLVQRSALHFHVEILKHYFLRKY 314          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: UPI000A2A638A (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A638A)

HSP 1 Score: 152 bits (384), Expect = 4.240e-40
Identity = 110/328 (33.54%), Postives = 172/328 (52.44%), Query Frame = 1
Query:   13 HCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            +C   V+R DY+ +L +LL    + + F++                 +A A+RAFNVE A I+D+V    + GK RM +W+D L  ++ G+PP  PVA+AL EAV  +K  L++RWF R++DAR  +L+    + ++ +E Y EN+ SS+LYL LE +G++                +GKA+GI TLLR        AA  L +        +PS+++ K  + H  + RG      + +L + V+E+AS A  H+  A    +        K+P  A   LLPGV    YL+ +Q + FN FD SLR ++ L   L+L + V+  K+
Sbjct:   40 YCIQIVRRMDYENFLCTLL----IPKKFQK-----------------SAFAVRAFNVELAQIRDAVNDKQI-GKARMLFWRDCLEQVYKGQPPQHPVAMALTEAV--EKHNLSKRWFTRLIDARETNLEDKPHQDIKSLEDYNENSVSSVLYLILESSGIK------DVHADHAASHIGKAIGIVTLLR--------AAPYLAN---QRKVYIPSDILIKHEVSHQDVIRGNA----SQSLKDVVYELASTANTHMSTARSFQS--------KVPKAAIKTLLPGVSCQNYLDKVQKADFNMFDNSLRERNNL-LPLQLLKQVLKGKY 313          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A2R6XSE0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XSE0_MARPO)

HSP 1 Score: 145 bits (367), Expect = 7.960e-38
Identity = 115/325 (35.38%), Postives = 159/325 (48.92%), Query Frame = 1
Query:    7 FGHCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPE-TLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQ----SPLRFQLR 966
            F +C   V+R DY  YL  L   P++R+                     AA AIRAFNVETA + D+ R  +  G MR+ WWKD++  I+   P   PVA AL+  +A  +  L+++WF R+++AR+ DL+ T P  ++ E+E YAENTAS +LYL LE AG+R+ A             +GKA GI  LLR   +            G      +P ++  K  L    + RG   +    ALA+ V EVAS A  HL  A  +LA+        +P GA   LLP V     L++L+   FN FD  L       SPL  QL+
Sbjct:   11 FSYCVQQVRRYDYANYLCLLHLPPEVRK---------------------AAFAIRAFNVETARVGDNTR-EIQLGVMRLFWWKDTIDGIYKKTPVEHPVAQALSSVLAEHR--LSKQWFSRLIEARVTDLEATAPPVSMAEVERYAENTASVILYLTLEAAGIRSTAADHAASH------IGKAAGIGLLLRGTPV-----------HGSRRRTYIPIDIAAKHGLSQEDIYRGQNRE----ALADAVHEVASFANAHLVHAR-SLAST-------VPKGAVTVLLPAVPAGLLLQSLEKCNFNVFDSKLNSGVCGVSPLWMQLQ 282          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: UPI0009E2A20F (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2A20F)

HSP 1 Score: 145 bits (367), Expect = 1.170e-37
Identity = 108/313 (34.50%), Postives = 150/313 (47.92%), Query Frame = 1
Query:   13 HCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPL 951
            +C + V+  DY+ YL  LL     R                      AA A+RAFNVE A I+D V    + GKMR+Q+W+DSL + F G PP  PVAL LAEA+A  K  LT+ WF R++DAR   LD     T   +E ++ENT SS+LYL LE  GV+                +GKA+G+ TLLR+               G      +P+ VM K+ +    + RG         + +  +++AS+A  HL  A+  ++        K P  A  A LP V    YL  +Q + FN FD SLR ++ L
Sbjct:   36 YCVNLVRNLDYENYLCVLLLPKSSRT---------------------AAFAVRAFNVELARIQDIVSEPTI-GKMRLQFWRDSLENTFQGNPPQQPVALKLAEAIARHK--LTKGWFSRLIDARERSLDNRPHATTNALEEHSENTVSSVLYLILECLGVK------DVQADHAASHLGKAIGVVTLLRATPF-----------HGNKGKVYMPNNVMIKYGVSQEDIIRGKT----TQPVKDVAYDLASLAHSHLSTAQSLMS--------KAPKAASRAFLPIVSCQTYLTKIQQADFNIFDPSLRERNHL 295          
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Match: A0A8H5LKI0_9AGAR (Uncharacterized protein n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5LKI0_9AGAR)

HSP 1 Score: 145 bits (366), Expect = 2.450e-37
Identity = 113/333 (33.93%), Postives = 167/333 (50.15%), Query Frame = 1
Query:    1 DPFGHCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVVPAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLPVALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLFLELAGVRAGAGXXXXXXXXXXXXVGKAVGICTLLRSMALPPPPAAAALGSAGFSESCVLPSEVMRKFLLRHAVLER-GPQDDVEAHALAECVFEVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQDSGFNAFDESLRPQSPLRFQLRLGRAVISEKF 996
            DPF +C+D V++ DY+ YL S      LR  +                      AI+AF+VE A ++D V  N   GKMRMQ+W+D++ DIF G PP  P ALAL  A   Q   L    F R++DAR A+L+ T  +T++++ +++E+T SSLLY+FL L                    +G A  I TLLR++     P  +  G +      V+P+E+  +  +R   L R GP    EA  + + +FE A++A  H+  A   L    +E GGK+P+GA    L GV V   L+ L+ + FNAFD  L+ Q   +    + RA    +F
Sbjct:   40 DPFEYCTDLVRKHDYESYLISQFWPRDLRGSY---------------------FAIKAFSVELATVQDHV-SNTTIGKMRMQFWRDAIKDIFNGRPPRHPTALALFHA--TQIAHLQPYHFKRIIDARDAELETTSYQTIDQLISHSESTHSSLLYIFLSLLPSPLN---DSHTLSHCASHLGNAQTITTLLRAL-----PYHSKQGRS------VIPAEITSRHGVRQEELFRKGP----EAQGIEDAIFEFATLANDHMITARSML----KEVGGKVPSGAMPVFLVGVPVTNLLQRLEKNSFNAFDPKLQ-QRDWKLPWHIYRAYYRREF 325          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig688.15636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSI4_ECTSI3.760e-18581.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPK2_9STRA2.750e-7242.60Squalene/phytoene synthase-domain-containing prote... [more]
A0A4D9CW87_9STRA1.040e-6342.02Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8K1C5K0_PYTOL2.370e-4436.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8H7S3B4_9FUNG5.150e-4137.10Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A5D6XXS5_9STRA3.090e-4036.09Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI000A2A638A4.240e-4033.54NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A2R6XSE0_MARPO7.960e-3835.38Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
UPI0009E2A20F1.170e-3734.50NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A8H5LKI0_9AGAR2.450e-3733.93Uncharacterized protein n=1 Tax=Leucoagaricus leuc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig688contigL-elsbetiae_contig688:24622..27422 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score524.6
Seed ortholog evalue3.3e-146
Seed eggNOG ortholog2880.D7FSI4
KEGG koko:K18163
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mitochondrial respiratory chain complex I assembly
EggNOG OGsCOG1562@1,KOG4411@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Ec32 ortholog descriptionIsoprenoid synthase domain
Ec32 orthologEc-11_003830.1
Exons4
Model size999
Cds size999
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig688.15636.1prot_L-elsbetiae_contig688.15636.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig688 24622..27422 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.2050097-CDS-L-elsbetiae_contig688:24621..251861622816761.2050097-CDS-L-elsbetiae_contig688:24621..25186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 24622..25186 -
1691683793.499985-CDS-L-elsbetiae_contig688:24621..251861691683793.499985-CDS-L-elsbetiae_contig688:24621..25186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 24622..25186 -
1622816761.217391-CDS-L-elsbetiae_contig688:26129..262951622816761.217391-CDS-L-elsbetiae_contig688:26129..26295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 26130..26295 -
1691683793.5103247-CDS-L-elsbetiae_contig688:26129..262951691683793.5103247-CDS-L-elsbetiae_contig688:26129..26295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 26130..26295 -
1622816761.2305307-CDS-L-elsbetiae_contig688:26596..267151622816761.2305307-CDS-L-elsbetiae_contig688:26596..26715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 26597..26715 -
1691683793.5187757-CDS-L-elsbetiae_contig688:26596..267151691683793.5187757-CDS-L-elsbetiae_contig688:26596..26715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 26597..26715 -
1622816761.243491-CDS-L-elsbetiae_contig688:27273..274221622816761.243491-CDS-L-elsbetiae_contig688:27273..27422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 27274..27422 -
1691683793.5275369-CDS-L-elsbetiae_contig688:27273..274221691683793.5275369-CDS-L-elsbetiae_contig688:27273..27422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig688 27274..27422 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig688.15636.1

>prot_L-elsbetiae_contig688.15636.1 ID=prot_L-elsbetiae_contig688.15636.1|Name=mRNA_L-elsbetiae_contig688.15636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
DPFGHCSDTVKRGDYDGYLYSLLQGPQLRQGFRRHCRCPRLACLTSVDVV
PAALAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDSLADIFAGEPPPLP
VALALAEAVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENT
ASSLLYLFLELAGVRAGAGPGAGALGHAAGHVGKAVGICTLLRSMALPPP
PAAAALGSAGFSESCVLPSEVMRKFLLRHAVLERGPQDDVEAHALAECVF
EVASVAKGHLEAAEENLAAAREEAGGKLPAGAFAALLPGVRVAWYLETLQ
DSGFNAFDESLRPQSPLRFQLRLGRAVISEKF*
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mRNA from alignment at L-elsbetiae_contig688:24622..27422-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig688.15636.1 ID=mRNA_L-elsbetiae_contig688.15636.1|Name=mRNA_L-elsbetiae_contig688.15636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2801bp|location=Sequence derived from alignment at L-elsbetiae_contig688:24622..27422- (Laminarionema elsbetiae ELsaHSoW15)
GATCCCTTTGGGCACTGCAGCGATACAGTAAAACGCGGGGACTACGATGG GTACCTGTACAGCTTGCTTCAGGGGCCGCAGCTAAGGCAAGGCTTTCGAC GACACTGCCGCTGCCCTCGCCTGGCCTGCCTGACCTCTGTTGACGTAGTG TGAATATTCAGCAGCCAGTGCTGGCACCGTGCAGATTATTGTGCCATTGC ACTCACGCATCAGTAGCGCATATGTGGGTCCAGCAGAACCAGGACCCTCC ATCGAGTCAGACATTAGCTACAGTCAGTAGAGAACGCGCCGTACCAGCCA GCTCTCAACGCACTCTCCTCCCGTCGACTTCCATGCACCAGATGCCAATA GTGGCACCCAGGTAGGCCGAAACCGACGAGCAGCATTATAGCACGACGGC ACTGACTGTACATCTCTGTCTGTTGTACAGCAATAAGCTAGTATAAATAG TCTTCTCGGTTTCCGATGGAACATCACATGATGATCCGATGTAGAAGTGT ACGTGTGTGTGTGCCACAATGGAGAGGGCACCTTGTTGTCGCCTCGAAGG TCTGCCCGAAACATTTCTTCCTAGTTCCCGTTTCAATTGCGCTCCGTCTT CTGACAGGGCGGAGCTGCTGCACCCAAATGATGCGATCGCGTACAACGAA TGCCCCGTTACCGACTGCTGCGTACGACAACCGCCGTTGCCGCCTTCTCT AAAGCAGGCCAGCGGCGTTGGCCATTCGGGCGTTTAACGTCGAGACCGCG GCCATCAAGGACTCCGTTCGGGGAAACGTCATGCCGGGGAAGATGCGGAT GCAGTGGTGGAAGGACTCCCTGGCAGGTGTGTAATTACACACTGCCGTAT TGTAGGAGCATCAAGGACTGGTATTAAAGTAAATAGGACCCACCTCGATT CTTCGGCGTAGGCACAAGAGAGGTACCGTACACTTGTCGCCACATAAATG GCACCCCTCTGCATAGGTGCTTGTGTGGTAGGTTGCGATGTTGACCAACA GATGGGCACACTTGTGGATGGGCAGCAACACCAGCCTGCTGAAATATTTT CGAGGCACACAACCTAAAACATGCAACGTGTACATTCATATGGCCGCGCT GCTCGTTCTTTCGTTCCACCCAATAAGATATATTCGCCGGGGAGCCGCCG CCGCTACCGGTTGCTCTTGCTTTGGCCGAAGCGGTCGCCAACCAGAAAGG CGGGCTCACACGCAGGTGGTTCGACCGCGTGCTGGATGCGAGGATGGCCG ACTTGGACAGGACGCAGCCGGAGACTCTAGAGGAGATGGAAACGTGGGTG AAGGAAGACAGGACTGCCTTTTTTAACCTTTGCCGATATTTTTAACGTTT GTTGTCCGTACTTGATCAGTCCTTATCGCTGAAAATTATGCCGGCAGTCG TGGACGCGACTCGAGCACAGCAGCAGTGGATACATTTTCCGATGGTTCCT TTTCTTCCAAGATTGTTGCCTTAATTTATACTTCTAGGTATATAGCACAG CTGTTTCCGCGTCAAGTGTTTTGGGTTAGTATGGATACATGGAGGTACTG GATAGAGAGATCGGAATGGTTTTGAGTGTGTGAAGACAACAAGAGCAACA ACAACAACAACAACAACAACAACAAAGCTGTTTTCGCCTAGTGTCTGCTT CCATCTTCGTCAAAGAGGGCATTCCAAACTTGTTGTCAAATATCAGCCGG GCATCCAGATTTTGACTGGTTCGTTTCTTAGGCAAGCGCGGCGTGCAGCG TTTCAGCAGCGTTGCTCTCCGACAGCTCGATCCCACAAGGTGCCCGGCGT TTGGGGCGATGACTTCCTATCTCTCCGGGAAAGGGCACCGGACACAAGCT GTTGCCTTGAATCGGGATCGTACGCTGCTTCCCTCCGTACGTTTTATCCG GCGTGTCCCGAGGTGTTTGTGAGGGTCCCTGCGTGACCGCCATTAAAAAA ATCGAGTGCCTTTCGCGCAGGGCCTTCTTTCAAGAGATTGCTCCCCCATT TTCGGATACGCGGCGACGATGTCAAACTATCTAAAAACAAACACGAGCAA GGTCTGATCCCGGTCCCTATCGCGTGACCGCATCCCTCTCAATCGGCAGA GGATTTAATAGGTTCGGAACAAGGCACGCACCCACCTACCCACCCACCAT CAATCCATCTTCCGTGGCCCACTACACGTGCCACTTGCCCACATTCCACC CGTCCGTTCGTCCGTCCGTCCACCCGTCTCTCTCAGGTACGCAGAAAACA CGGCCTCGTCGCTCCTCTACCTGTTCCTCGAGCTGGCCGGCGTGCGCGCC GGGGCGGGTCCGGGGGCGGGCGCGCTGGGGCACGCCGCGGGGCACGTCGG GAAGGCCGTGGGCATCTGCACGCTGCTGCGGTCGATGGCGCTGCCGCCGC CGCCGGCGGCGGCTGCGCTCGGCAGCGCTGGGTTCTCGGAGTCGTGCGTG CTCCCCTCCGAGGTGATGCGGAAGTTCCTGCTCCGGCACGCCGTGCTGGA GAGGGGCCCGCAGGACGACGTGGAGGCGCACGCGCTCGCGGAGTGCGTGT TCGAGGTGGCCTCCGTCGCCAAGGGGCATCTCGAGGCCGCCGAGGAGAAC CTGGCGGCGGCGCGGGAGGAGGCCGGCGGCAAGCTGCCGGCGGGGGCGTT CGCGGCGCTGCTCCCCGGGGTGCGGGTGGCGTGGTACCTGGAGACGCTCC AGGACAGCGGGTTCAACGCGTTCGACGAGAGCCTGAGACCGCAGAGCCCG CTGAGATTTCAGCTGCGGCTGGGTCGAGCCGTGATTTCGGAGAAATTCTG A
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Coding sequence (CDS) from alignment at L-elsbetiae_contig688:24622..27422-

>mRNA_L-elsbetiae_contig688.15636.1 ID=mRNA_L-elsbetiae_contig688.15636.1|Name=mRNA_L-elsbetiae_contig688.15636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig688:24622..27422- (Laminarionema elsbetiae ELsaHSoW15)
GATCCCTTTGGGCACTGCAGCGATACAGTAAAACGCGGGGACTACGATGG
GTACCTGTACAGCTTGCTTCAGGGGCCGCAGCTAAGGCAAGGCTTTCGAC
GACACTGCCGCTGCCCTCGCCTGGCCTGCCTGACCTCTGTTGACGTAGTG
ATCCCTTTGGGCACTGCAGCGATACAGTAAAACGCGGGGACTACGATGGG
TACCTGTACAGCTTGCTTCAGGGGCCGCAGCTAAGGCAAGGCTTTCGACG
ACACTGCCGCTGCCCTCGCCTGGCCTGCCTGACCTCTGTTGACGTAGTGC
CAGCGGCGTTGGCCATTCGGGCGTTTAACGTCGAGACCGCGGCCATCAAG
GACTCCGTTCGGGGAAACGTCATGCCGGGGAAGATGCGGATGCAGTGGTG
GAAGGACTCCCTGGCAGGCCAGCGGCGTTGGCCATTCGGGCGTTTAACGT
CGAGACCGCGGCCATCAAGGACTCCGTTCGGGGAAACGTCATGCCGGGGA
AGATGCGGATGCAGTGGTGGAAGGACTCCCTGGCAGATATATTCGCCGGG
GAGCCGCCGCCGCTACCGGTTGCTCTTGCTTTGGCCGAAGCGGTCGCCAA
CCAGAAAGGCGGGCTCACACGCAGGTGGTTCGACCGCGTGCTGGATGCGA
GGATGGCCGACTTGGACAGGACGCAGCCGGAGACTCTAGAGGAGATGGAA
ACATATATTCGCCGGGGAGCCGCCGCCGCTACCGGTTGCTCTTGCTTTGG
CCGAAGCGGTCGCCAACCAGAAAGGCGGGCTCACACGCAGGTGGTTCGAC
CGCGTGCTGGATGCGAGGATGGCCGACTTGGACAGGACGCAGCCGGAGAC
TCTAGAGGAGATGGAAACGTACGCAGAAAACACGGCCTCGTCGCTCCTCT
ACCTGTTCCTCGAGCTGGCCGGCGTGCGCGCCGGGGCGGGTCCGGGGGCG
GGCGCGCTGGGGCACGCCGCGGGGCACGTCGGGAAGGCCGTGGGCATCTG
CACGCTGCTGCGGTCGATGGCGCTGCCGCCGCCGCCGGCGGCGGCTGCGC
TCGGCAGCGCTGGGTTCTCGGAGTCGTGCGTGCTCCCCTCCGAGGTGATG
CGGAAGTTCCTGCTCCGGCACGCCGTGCTGGAGAGGGGCCCGCAGGACGA
CGTGGAGGCGCACGCGCTCGCGGAGTGCGTGTTCGAGGTGGCCTCCGTCG
CCAAGGGGCATCTCGAGGCCGCCGAGGAGAACCTGGCGGCGGCGCGGGAG
GAGGCCGGCGGCAAGCTGCCGGCGGGGGCGTTCGCGGCGCTGCTCCCCGG
GGTGCGGGTGGCGTGGTACCTGGAGACGCTCCAGGACAGCGGGTTCAACG
CGTTCGACGAGAGCCTGAGACCGCAGAGCCCGCTGAGATTTCAGCTGCGG
CTGGGTCGAGCCGTGATTTCGGAGAAATTCTGAGTACGCAGAAAACACGG
CCTCGTCGCTCCTCTACCTGTTCCTCGAGCTGGCCGGCGTGCGCGCCGGG
GCGGGTCCGGGGGCGGGCGCGCTGGGGCACGCCGCGGGGCACGTCGGGAA
GGCCGTGGGCATCTGCACGCTGCTGCGGTCGATGGCGCTGCCGCCGCCGC
CGGCGGCGGCTGCGCTCGGCAGCGCTGGGTTCTCGGAGTCGTGCGTGCTC
CCCTCCGAGGTGATGCGGAAGTTCCTGCTCCGGCACGCCGTGCTGGAGAG
GGGCCCGCAGGACGACGTGGAGGCGCACGCGCTCGCGGAGTGCGTGTTCG
AGGTGGCCTCCGTCGCCAAGGGGCATCTCGAGGCCGCCGAGGAGAACCTG
GCGGCGGCGCGGGAGGAGGCCGGCGGCAAGCTGCCGGCGGGGGCGTTCGC
GGCGCTGCTCCCCGGGGTGCGGGTGGCGTGGTACCTGGAGACGCTCCAGG
ACAGCGGGTTCAACGCGTTCGACGAGAGCCTGAGACCGCAGAGCCCGCTG
AGATTTCAGCTGCGGCTGGGTCGAGCCGTGATTTCGGAGAAATTCTGA
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