mRNA_L-elsbetiae_contig6874.15631.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 309 bits (791), Expect = 6.390e-84 Identity = 192/331 (58.01%), Postives = 210/331 (63.44%), Query Frame = 3 Query: 183 STMSTLLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQGVAHGLSTYTRLRGDVAMPGFSDAVSNGTVDTVACETLLDGVAKR 1175 S+ S LLP+VRCGIEMA+VHLVARAAGVS+GAA+SAASGLPCR +VEINGLA RGEGV + PRVLKVKVGG AGP EDAA GGV + G E V GVDL VEYIEEPLR PRSLG FWERSG +VPYALDESL MGRE FTDK L GCAA V+KVSVVGGL RSA+LC LA R+GA+AVLSSAFE+GVGLAHASILASCF T GVAHGLSTY+RL+GDVA PGF+ VS G VDT+ACE LLD VA R Sbjct: 2368 SSPSRLLPTVRCGIEMAVVHLVARAAGVSVGAAVSAASGLPCRGAVEINGLATRGEGVATGG-STEAGPRVLKVKVGGIAGPSEDAA-----------------GGVAGV------------------------------------------------------TGGGE--GVEGVDLSLVEYIEEPLREPRSLGKFWERSGGIVPYALDESLAMGREKFTDK----LEGCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPGVAHGLSTYSRLQGDVATPGFASTVSGGKVDTLACEELLDRVAMR 2620
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A6H5JZW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW3_9PHAE) HSP 1 Score: 282 bits (722), Expect = 2.710e-76 Identity = 176/331 (53.17%), Postives = 190/331 (57.40%), Query Frame = 3 Query: 183 STMSTLLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQGVAHGLSTYTRLRGDVAMPGFSDAVSNGTVDTVACETLLDGVAKR 1175 S+ S LLPSVRCGIEMA+VHL ARAAGVSIGAA+SAASGLPCR +VEINGLA RGEGV TG R GVDL VEYIEEPLR PRSLG FWERSG VVPYALDESL MGRE FTDKELL+L GCAA V+KVSVVGGL RSA+LC LA +GA+AVLSSAFE+GVGLAHASILASCF T GVAHGLSTY+RL+GDVA PGF+ VS G VDT+ACE LLD VA R Sbjct: 889 SSSSRLLPSVRCGIEMAVVHLAARAAGVSIGAAVSAASGLPCRGAVEINGLATRGEGV---------------------------------------ATGGSTR----------------------------------------------------------------------GVDLSLVEYIEEPLREPRSLGKFWERSGGVVPYALDESLAMGREKFTDKELLQLEGCAAFVVKVSVVGGLSRSARLCGLARHLGAEAVLSSAFETGVGLAHASILASCFTTPGVAHGLSTYSRLQGDVATPGFASTVSGGKVDTLACEDLLDRVAMR 1110
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A835Z855_9STRA (Enolase C-terminal domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z855_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.670e-27 Identity = 106/296 (35.81%), Postives = 142/296 (47.97%), Query Frame = 3 Query: 306 CRSSVEINGLAARGEGVP-SRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQGVAHGLSTYTRL----RGDVAMPGFSDAVSNGT-VDTVACETLLDGVAKR 1175 C +V +N L R P + R V+KVKVGG GP DA R + T RLDANQAWT+ EAL F+ L +P R +VEYIEEPLR+PR L F + + P+ALDES+ G + D L +L ALV+K +V+GG+ + + AA GA V++SAFE+GV L+H +ILAS +++G HGLST+ RL G V +P FS+AV +G +D C+ LLD A R Sbjct: 184 CCGAVRMNSLLTRSPAQPVTTSRPLQHWSHVVKVKVGGACGPRADADRVNAIAARGDTR--------------LRLDANQAWTLHEALAFTREL--------------------------------SPRARN-------AVEYIEEPLRDPRQLPRFSDATDGF-PFALDESVTDGVGSVAD--LTDLRP-TALVLKPTVMGGVEETVSWAQAAAHCGAAVVITSAFETGVCLSHLAILASALSSEGTCHGLSTFDRLSKEGEGRVWLPDFSEAVYDGDMIDVAVCQRLLDTCASR 422
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A7S4R202_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R202_9DINO) HSP 1 Score: 130 bits (327), Expect = 7.300e-27 Identity = 124/342 (36.26%), Postives = 159/342 (46.49%), Query Frame = 3 Query: 198 LLPSVRCGIEMALVHLVARAAGVS-IGAAISAASGLPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFW----ERSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQ--------GVAHGLSTYTRLRGDVAMPGFSDAVSNGTVD-----TVACETLLDGVA 1169 LLPSVR G EMAL+HL ARAAG +GA + A C S + INGL R E + + P V+KVKVG P+EDA RT+ L GG LR LDANQAW +++A+ F L+D + L EY+EEP+ P SL W +++ V A DESL G + D E A AAL++K S+ G L R+ L R A G + VLSSAFESGV L H ++LA+ A Q HGL T+T L DV +P F+D V +G D + C+ LD A Sbjct: 1626 LLPSVRAGFEMALLHLAARAAGAPHLGALAARARQASCSSGIGINGLVVREEDLGD----LSGGPMVVKVKVG--KDPVEDALRTSRLAEALEQR----MGGKARLR----LDANQAWAVEDAVRFVGKLSDRA---------------------------------------LSLTEYLEEPVV-PGSLVADWALLTQQTQARVHLAADESLTEGHISVEDLATCE-APIAALILKPSLQG-LERTLDLARWALARGVRPVLSSAFESGVALCHLAVLAASMAPQPWLPETRVSGYHGLGTFTHLAEDVLLPPFADLVRHGRTDGWCADLLRCQEALDRTA 1911
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A7S4L500_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L500_GUITH) HSP 1 Score: 117 bits (293), Expect = 1.120e-23 Identity = 115/325 (35.38%), Postives = 156/325 (48.00%), Query Frame = 3 Query: 204 PSVRCGIEMALVHLVARAAGVSIGAAISAASG--LPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVD-LGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESLGMGREAFTD--KELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCF--ATQGVAHGLSTYTRLRGDVAMPGFSDAVSNGTVDTVACETLL 1157 P V +EMALV LV+ A + +S S RS V +NGL RGE E R+ S RV+KVKVGGK ++A +LV+++ G +R LDAN+ W +++A+ F S++ G D L +EYIEEPL + R L F++++G + YALDESL D +EL + AG AALV+K +++GGL R +L +L AR G KAVLSSAFESG+ I A + AHGLST+ RL D S + NG +D CE L Sbjct: 258 PVVLAALEMALVQLVSHALERPLCRVLSPPSSGHSKLRSFVSLNGLMTRGEV----ELPRSCSSRVVKVKVGGKEDVKKEAEELRDLVKKAKEEGWKLR-----------LDANRCWDLEQAVQFVSSI----------------------------------------GFDNLSVIEYIEEPLTDFRQLPRFFQQTG--LSYALDESL------LDDSWEELAQDAGLAALVLKPTLLGGLERCCQL-KLRAREGVKAVLSSAFESGLAHCFYGIAAGVLLDVEEAHAHGLSTFERLETDSLTVPMSQTMWNGRIDIFKCEQEL 518
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A7S2PK40_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PK40_9DINO) HSP 1 Score: 114 bits (285), Expect = 7.900e-23 Identity = 115/350 (32.86%), Postives = 158/350 (45.14%), Query Frame = 3 Query: 198 LLPSVRCGIEMALVHLVARAAGVSIGAAISA-ASGLPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAAR---TAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLR----NPRSLGTFWE----RSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFA--------TQGVAHGLSTYTRLRGDVAMPGFSDAV------SNGTVDTVACETLLDGVA 1169 LLPSVRCG+EMA++HL+ R I + ++A A G+ C S + IN L AR E + R +D V+KVKVG + P +D+ R A+++R R G A RLDANQAW +DEA F L+D++ A EY+EEP+R P + WE R+ R V +ALDESL + + + A V+ + G+ ++ L A G++ V+SSAFESGV LAH +ILA+ T HGL T+ RL DV P F D V VD + C+ LD A Sbjct: 191 LLPSVRCGLEMAVLHLLGRVTQTPILSGVAANARGVGCASCIGINSLIAREEEL----RGPSDGAVVVKVKVGRE--PTQDSQRINTVADILRA--------RRGPDA---RLRLDANQAWDIDEAAEFLKGLSDSTVA---------------------------------------MTEYLEEPVRWNALGPEAFLQDWETLAARTERRVRFALDESLT--EQDLGTHHVDQCGASVAAVVLKPALQGMEQTMSLAAWAIARGSRPVVSSAFESGVALAHFAILAAAMTPPLWQTEDTVSACHGLGTFARLAEDVLDPPFEDLVLERRPCGGWHVDALRCQEALDRTA 482
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A6J4RPY7_9ACTN (o-succinylbenzoate synthase n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4RPY7_9ACTN) HSP 1 Score: 106 bits (265), Expect = 5.600e-21 Identity = 103/303 (33.99%), Postives = 143/303 (47.19%), Query Frame = 3 Query: 198 LLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAARG--EGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESL-GMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQGVAHGLSTYTRLRGDVAMP 1097 +LPSVR G+E+A +L + G S+ A IS R +V +NGL A E + R R+ +K+KVGG+ P+ + V E+ GG ALR LDAN+AW++DEAL F+ G++ +EY+EEPL +P L F + G V ALDESL GM E+ L E A+V+K S++GGL R+ +L A +G + V+SSA+E+GVG A LA+ T + GL TY RL GDV P Sbjct: 98 ILPSVRFGLELAAWNLYGASTGASLPALISPGH----RPTVPVNGLLAGSPDEVLEGARRMRDAGYVAVKLKVGGR--PVSEDVALVRAVAEAL-------GGDVALR----LDANRAWSLDEALGFAR------------------------------------------GIEGQEIEYLEEPLADPAGLEEFALKGG--VKVALDESLVGMEPES-----LAEHPYAGAVVLKPSLLGGLSRTLRLAERAVGLGMRPVVSSAYETGVGTAALVALAAGIGTGEIPAGLDTYRRLAGDVIEP 334
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A7S1WEX3_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEX3_ALECA) HSP 1 Score: 103 bits (258), Expect = 7.690e-21 Identity = 104/308 (33.77%), Postives = 140/308 (45.45%), Query Frame = 3 Query: 306 CRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAART---AELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVP----YALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCF--------ATQGVAHGLSTYTRLRGDVAMPGFSDAVSNGT-----VDTVACETLLDGVA 1169 C S + INGL AR E + + +D P V+KVKVG P+EDA RT AEL+ A +R LDANQAW +++A F AL++ + A +EY EEP+ P +L WER +V A+DESL G+ D E + A AAL++K ++ G L R+ +L A G + VLSSAFESGV L H +ILA+ + HGL T+T L DV P F+D V NG D ++C+ LD A Sbjct: 4 CASGIGINGLMAREEDLG----ELSDGPMVVKVKVG--KDPLEDARRTNGLAELLERQMGPQARLR-----------LDANQAWAVEDAARFVGALSERAVA---------------------------------------LIEYWEEPVA-PGNLVRDWERLSSLVDERVKLAVDESLTEGKVGVEDLEACK-APVAALILKPALQG-LERTLELAAWAVARGQRPVLSSAFESGVALCHFAILAASMTPLPGLRQSEVSACHGLGTFTHLAEDVLRPPFADLVRNGHGSGWGADLLSCQGALDRTA 252
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A812RG24_9DINO (PHYLLO protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812RG24_9DINO) HSP 1 Score: 109 bits (272), Expect = 1.300e-20 Identity = 117/345 (33.91%), Postives = 159/345 (46.09%), Query Frame = 3 Query: 198 LLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAARGEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLR-NP-RSLGTF---WE----RSGRVVPYALDESLGMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQ------GVAHGLSTYTRLRGDVAMPGFSDAVSNGT-----VDTVACETLLDGVAK 1172 LLPSVR G+EMAL+HL+ R AA + A GL C+S V IN L A+ + + + D V K+KVG P +DAART L + RG LR LDAN+AWT +A F ++L+ A+ A +Y+EEP + P +S F WE +G V A+DESL G + D + A AALV+K S+ G + ++ + A GA VLSSAFESGV L H ++L + Q G HGL T+TRL+ DV P F+D V+ G V +C+ LD + Sbjct: 508 LLPSVRAGLEMALLHLLRRDYPQPYAAA-ALARGLCCQSEVSINSLVAQNDDLDT------DGASVAKLKVG--KDPKQDAARTNRLAEKLHER----RGDKARLR----LDANRAWTTAQAAEFLNSLSPAAVA---------------------------------------LTDYLEEPTQWEPGQSAAEFLQQWEDVSTATGSRVRLAVDESLTEGVVSLEDLTKCK-APIAALVLKPSLQG-IEQTVAMSMWALERGAMPVLSSAFESGVALVHFALLGAALVQQPWKGDAGKVHGLGTFTRLKEDVLQPHFADLVTTGEGHGWQVSVPSCQEALDATVQ 794
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Match: A0A2N5KS07_9ACTN (o-succinylbenzoate synthase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5KS07_9ACTN) HSP 1 Score: 105 bits (261), Expect = 1.900e-20 Identity = 99/303 (32.67%), Postives = 136/303 (44.88%), Query Frame = 3 Query: 198 LLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAAR--GEGVPSRERQRNDSPRVLKVKVGGKAGPIEDAARTAELVRESTTTGAGMRGGVGALRDTFRLDANQAWTMDEALLFSSALADASAAPPGTSSCXXXXXXXXXXXXXXXXRAGAPELRQVPGVDLGSVEYIEEPLRNPRSLGTFWERSGRVVPYALDESL-GMGREAFTDKELLELAGCAALVIKVSVVGGLCRSAKLCRLAARMGAKAVLSSAFESGVGLAHASILASCFATQGVAHGLSTYTRLRGDVAMP 1097 L PSVR G E+A+ +L A GV++ A IS G V +NGL A + R R+ +K+KVG + +E+ V E+ G +R LDAN+AWT+DEAL F+ G++ VEY+EEPL +P L + SG +P ALDESL GM E+ + A+V+K S +GGL R +L AA +G + V+SSA+E+GVG A LA+ G+ GL Y RL GDV P Sbjct: 98 LAPSVRFGFELAIWNLYAATRGVALPAVISQVFG----DVVSLNGLLAGPPAGALEEARRMRDAGYEAVKLKVGART--VEEDVALVRAVGEALGRGVALR-----------LDANRAWTLDEALEFAR------------------------------------------GIEGLRVEYLEEPLADPAGLKALTQASG--LPVALDESLVGMAPESLGEHRY-----AGAVVLKPSFLGGLSRVLRLAERAASLGMRPVVSSAYETGVGTASLVALAAGIGGGGIPAGLDPYRRLAGDVVEP 334 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6874.15631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6874.15631.1 >prot_L-elsbetiae_contig6874.15631.1 ID=prot_L-elsbetiae_contig6874.15631.1|Name=mRNA_L-elsbetiae_contig6874.15631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp MSTLLPSVRCGIEMALVHLVARAAGVSIGAAISAASGLPCRSSVEINGLAback to top mRNA from alignment at L-elsbetiae_contig6874:293..4480+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6874.15631.1 ID=mRNA_L-elsbetiae_contig6874.15631.1|Name=mRNA_L-elsbetiae_contig6874.15631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4188bp|location=Sequence derived from alignment at L-elsbetiae_contig6874:293..4480+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6874:293..4480+ >mRNA_L-elsbetiae_contig6874.15631.1 ID=mRNA_L-elsbetiae_contig6874.15631.1|Name=mRNA_L-elsbetiae_contig6874.15631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2028bp|location=Sequence derived from alignment at L-elsbetiae_contig6874:293..4480+ (Laminarionema elsbetiae ELsaHSoW15)back to top |